Literature DB >> 27452230

Spatial structure, cooperation and competition in biofilms.

Carey D Nadell1, Knut Drescher1, Kevin R Foster2.   

Abstract

Bacteria often live within matrix-embedded communities, termed biofilms, which are now understood to be a major mode of microbial life. The study of biofilms has revealed their vast complexity both in terms of resident species composition and phenotypic diversity. Despite this complexity, theoretical and experimental work in the past decade has identified common principles for understanding microbial biofilms. In this Review, we discuss how the spatial arrangement of genotypes within a community influences the cooperative and competitive cell-cell interactions that define biofilm form and function. Furthermore, we argue that a perspective rooted in ecology and evolution is fundamental to progress in microbiology.

Mesh:

Year:  2016        PMID: 27452230     DOI: 10.1038/nrmicro.2016.84

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  149 in total

1.  Contributions of microbial biofilms to ecosystem processes in stream mesocosms.

Authors:  Tom J Battin; Louis A Kaplan; J Denis Newbold; Claude M E Hansen
Journal:  Nature       Date:  2003-11-27       Impact factor: 49.962

Review 2.  Morphological plasticity as a bacterial survival strategy.

Authors:  Sheryl S Justice; David A Hunstad; Lynette Cegelski; Scott J Hultgren
Journal:  Nat Rev Microbiol       Date:  2008-02       Impact factor: 60.633

Review 3.  Mucosal biofilm communities in the human intestinal tract.

Authors:  Sandra Macfarlane; Bahram Bahrami; George T Macfarlane
Journal:  Adv Appl Microbiol       Date:  2011       Impact factor: 5.086

4.  Extracellular matrix structure governs invasion resistance in bacterial biofilms.

Authors:  Carey D Nadell; Knut Drescher; Ned S Wingreen; Bonnie L Bassler
Journal:  ISME J       Date:  2015-01-20       Impact factor: 10.302

Review 5.  Microfluidics expanding the frontiers of microbial ecology.

Authors:  Roberto Rusconi; Melissa Garren; Roman Stocker
Journal:  Annu Rev Biophys       Date:  2014       Impact factor: 12.981

6.  Human symbionts inject and neutralize antibacterial toxins to persist in the gut.

Authors:  Aaron G Wexler; Yiqiao Bao; John C Whitney; Louis-Marie Bobay; Joao B Xavier; Whitman B Schofield; Natasha A Barry; Alistair B Russell; Bao Q Tran; Young Ah Goo; David R Goodlett; Howard Ochman; Joseph D Mougous; Andrew L Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-08       Impact factor: 11.205

7.  From metabolism to ecology: cross-feeding interactions shape the balance between polymicrobial conflict and mutualism.

Authors:  Sylvie Estrela; Christopher H Trisos; Sam P Brown
Journal:  Am Nat       Date:  2012-09-28       Impact factor: 3.926

8.  SAR11 marine bacteria require exogenous reduced sulphur for growth.

Authors:  H James Tripp; Joshua B Kitner; Michael S Schwalbach; John W H Dacey; Larry J Wilhelm; Stephen J Giovannoni
Journal:  Nature       Date:  2008-03-12       Impact factor: 49.962

9.  Psl trails guide exploration and microcolony formation in Pseudomonas aeruginosa biofilms.

Authors:  Kun Zhao; Boo Shan Tseng; Bernard Beckerman; Fan Jin; Maxsim L Gibiansky; Joe J Harrison; Erik Luijten; Matthew R Parsek; Gerard C L Wong
Journal:  Nature       Date:  2013-05-08       Impact factor: 49.962

10.  Multicellular bacteria deploy the type VI secretion system to preemptively strike neighboring cells.

Authors:  Christopher J Alteri; Stephanie D Himpsl; Shannon R Pickens; Jonathon R Lindner; Jonathan S Zora; Jessa E Miller; Peter D Arno; Samuel W Straight; Harry L T Mobley
Journal:  PLoS Pathog       Date:  2013-09-05       Impact factor: 6.823

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  215 in total

Review 1.  Interactions between host and gut microbiota in domestic pigs: a review.

Authors:  Yadnyavalkya Patil; Ravi Gooneratne; Xiang-Hong Ju
Journal:  Gut Microbes       Date:  2019-11-24

Review 2.  Pseudomonad reverse carbon catabolite repression, interspecies metabolite exchange, and consortial division of labor.

Authors:  Heejoon Park; S Lee McGill; Adrienne D Arnold; Ross P Carlson
Journal:  Cell Mol Life Sci       Date:  2019-11-25       Impact factor: 9.261

3.  Luminescent Nanosensors for Ratiometric Monitoring of Three-Dimensional Oxygen Gradients in Laboratory and Clinical Pseudomonas aeruginosa Biofilms.

Authors:  Megan P Jewell; Anne A Galyean; J Kirk Harris; Edith T Zemanick; Kevin J Cash
Journal:  Appl Environ Microbiol       Date:  2019-10-01       Impact factor: 4.792

4.  Spatiotemporal Dynamics of Synthetic Microbial Consortia in Microfluidic Devices.

Authors:  Razan N Alnahhas; James J Winkle; Andrew J Hirning; Bhargav Karamched; William Ott; Krešimir Josić; Matthew R Bennett
Journal:  ACS Synth Biol       Date:  2019-08-09       Impact factor: 5.110

5.  Bacterial scattering in microfluidic crystal flows reveals giant active Taylor-Aris dispersion.

Authors:  Amin Dehkharghani; Nicolas Waisbord; Jörn Dunkel; Jeffrey S Guasto
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-16       Impact factor: 11.205

Review 6.  Natural bacterial isolates as an inexhaustible source of new bacteriocins.

Authors:  Jelena Lozo; Ljubisa Topisirovic; Milan Kojic
Journal:  Appl Microbiol Biotechnol       Date:  2021-01-04       Impact factor: 4.813

7.  Mutant Evolution in Spatially Structured and Fragmented Expanding Populations.

Authors:  Dominik Wodarz; Natalia L Komarova
Journal:  Genetics       Date:  2020-07-13       Impact factor: 4.562

8.  Characterization of Social Interactions and Spatial Arrangement of Individual Bacteria in MultiStrain or Multispecies Biofilm Systems Using Nucleic Acid Mimics-Fluorescence In Situ Hybridization.

Authors:  Jontana Allkja; Andreia S Azevedo
Journal:  Methods Mol Biol       Date:  2021

Review 9.  Continuum and discrete approach in modeling biofilm development and structure: a review.

Authors:  M R Mattei; L Frunzo; B D'Acunto; Y Pechaud; F Pirozzi; G Esposito
Journal:  J Math Biol       Date:  2017-07-24       Impact factor: 2.259

10.  A Dual-Species Biofilm with Emergent Mechanical and Protective Properties.

Authors:  Sarah M Yannarell; Gabrielle M Grandchamp; Shih-Yuan Chen; Karen E Daniels; Elizabeth A Shank
Journal:  J Bacteriol       Date:  2019-08-22       Impact factor: 3.490

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