Literature DB >> 27430512

Genetic dissection of acetic acid tolerance in Saccharomyces cerevisiae.

Peng Geng1, Yin Xiao1, Yun Hu2, Haiye Sun1, Wei Xue3, Liang Zhang4, Gui-Yang Shi1.   

Abstract

Dissection of the hereditary architecture underlying Saccharomyces cerevisiae tolerance to acetic acid is essential for ethanol fermentation. In this work, a genomics approach was used to dissect hereditary variations in acetic acid tolerance between two phenotypically different strains. A total of 160 segregants derived from these two strains were obtained. Phenotypic analysis indicated that the acetic acid tolerance displayed a normal distribution in these segregants, and suggested that the acetic acid tolerant traits were controlled by multiple quantitative trait loci (QTLs). Thus, 220 SSR markers covering the whole genome were used to detect QTLs of acetic acid tolerant traits. As a result, three QTLs were located on chromosomes 9, 12, and 16, respectively, which explained 38.8-65.9 % of the range of phenotypic variation. Furthermore, twelve genes of the candidates fell into the three QTL regions by integrating the QTL analysis with candidates of acetic acid tolerant genes. These results provided a novel avenue to obtain more robust strains.

Entities:  

Keywords:  Acetic acid tolerance; Phenotypic analysis; QTL; SSR markers; Saccharomyces cerevisiae

Mesh:

Substances:

Year:  2016        PMID: 27430512     DOI: 10.1007/s11274-016-2101-9

Source DB:  PubMed          Journal:  World J Microbiol Biotechnol        ISSN: 0959-3993            Impact factor:   3.312


  28 in total

1.  Energetics of the effect of acetic acid on growth of Saccharomyces cerevisiae.

Authors:  M E Pampulha; M C Loureiro-Dias
Journal:  FEMS Microbiol Lett       Date:  2000-03-01       Impact factor: 2.742

Review 2.  Finding the molecular basis of quantitative traits: successes and pitfalls.

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Journal:  Nat Rev Genet       Date:  2001-06       Impact factor: 53.242

3.  Quantitative trait loci mapped to single-nucleotide resolution in yeast.

Authors:  Adam M Deutschbauer; Ronald W Davis
Journal:  Nat Genet       Date:  2005-11-06       Impact factor: 38.330

4.  QTL mapping of sake brewing characteristics of yeast.

Authors:  Taku Katou; Masahiro Namise; Hiroshi Kitagaki; Takeshi Akao; Hitoshi Shimoi
Journal:  J Biosci Bioeng       Date:  2009-04       Impact factor: 2.894

5.  Yeast genes involved in response to lactic acid and acetic acid: acidic conditions caused by the organic acids in Saccharomyces cerevisiae cultures induce expression of intracellular metal metabolism genes regulated by Aft1p.

Authors:  Miho Kawahata; Kazuo Masaki; Tsutomu Fujii; Haruyuki Iefuji
Journal:  FEMS Yeast Res       Date:  2006-09       Impact factor: 2.796

6.  Destabilization of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repair.

Authors:  M Strand; T A Prolla; R M Liskay; T D Petes
Journal:  Nature       Date:  1993-09-16       Impact factor: 49.962

Review 7.  Weak acid adaptation: the stress response that confers yeasts with resistance to organic acid food preservatives.

Authors:  Peter Piper; Claudia Ortiz Calderon; Kostas Hatzixanthis; Mehdi Mollapour
Journal:  Microbiology       Date:  2001-10       Impact factor: 2.777

8.  War1p, a novel transcription factor controlling weak acid stress response in yeast.

Authors:  Angelika Kren; Yasmine M Mamnun; Bettina E Bauer; Christoph Schüller; Hubert Wolfger; Kostas Hatzixanthis; Mehdi Mollapour; Christa Gregori; Peter Piper; Karl Kuchler
Journal:  Mol Cell Biol       Date:  2003-03       Impact factor: 4.272

Review 9.  Evolutionary dynamics of microsatellite DNA.

Authors:  C Schlötterer
Journal:  Chromosoma       Date:  2000-09       Impact factor: 4.316

10.  Polygenic analysis and targeted improvement of the complex trait of high acetic acid tolerance in the yeast Saccharomyces cerevisiae.

Authors:  Jean-Paul Meijnen; Paola Randazzo; María R Foulquié-Moreno; Joost van den Brink; Paul Vandecruys; Marija Stojiljkovic; Françoise Dumortier; Polona Zalar; Teun Boekhout; Nina Gunde-Cimerman; Janez Kokošar; Miha Štajdohar; Tomaž Curk; Uroš Petrovič; Johan M Thevelein
Journal:  Biotechnol Biofuels       Date:  2016-01-06       Impact factor: 6.040

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  5 in total

Review 1.  Omics analysis of acetic acid tolerance in Saccharomyces cerevisiae.

Authors:  Peng Geng; Liang Zhang; Gui Yang Shi
Journal:  World J Microbiol Biotechnol       Date:  2017-04-12       Impact factor: 3.312

Review 2.  Stress modulation as a means to improve yeasts for lignocellulose bioconversion.

Authors:  B A Brandt; T Jansen; H Volschenk; J F Görgens; W H Van Zyl; R Den Haan
Journal:  Appl Microbiol Biotechnol       Date:  2021-06-07       Impact factor: 4.813

Review 3.  Adaptive Response and Tolerance to Acetic Acid in Saccharomyces cerevisiae and Zygosaccharomyces bailii: A Physiological Genomics Perspective.

Authors:  Margarida Palma; Joana F Guerreiro; Isabel Sá-Correia
Journal:  Front Microbiol       Date:  2018-02-21       Impact factor: 5.640

4.  Genome-wide association across Saccharomyces cerevisiae strains reveals substantial variation in underlying gene requirements for toxin tolerance.

Authors:  Maria Sardi; Vaishnavi Paithane; Michael Place; De Elegant Robinson; James Hose; Dana J Wohlbach; Audrey P Gasch
Journal:  PLoS Genet       Date:  2018-02-23       Impact factor: 5.917

5.  Rapid Identification of Major QTLS Associated With Near- Freezing Temperature Tolerance in Saccharomyces cerevisiae.

Authors:  Li Feng; He Jia; Yi Qin; Yuyang Song; Shiheng Tao; Yanlin Liu
Journal:  Front Microbiol       Date:  2018-09-11       Impact factor: 5.640

  5 in total

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