| Literature DB >> 27422008 |
Yi-Chen Chen1,2, Jiunn-Wang Liao2, Wei-Li Hsu3, Shih-Chieh Chang4,5.
Abstract
BACKGROUND: KIT is a tyrosine kinase growth factor receptor. High expression of KIT has been found in several tumors including canine hemangiosarcoma (HSA). This study investigated the correlation of KIT expression and c-kit sequence mutations in canine HSAs and benign hemangiomas (HAs).Entities:
Keywords: Canine; GNSK-deletion; Hemangiosarcoma; Isoform; KIT; c-kit
Mesh:
Substances:
Year: 2016 PMID: 27422008 PMCID: PMC4947345 DOI: 10.1186/s12917-016-0772-y
Source DB: PubMed Journal: BMC Vet Res ISSN: 1746-6148 Impact factor: 2.741
Primary and secondary antibodies and antigen retrieval procedures used in IHC analysis of this study
| Time for incubation | |||||||
|---|---|---|---|---|---|---|---|
| Antibody | pAb/mAb (clone) | Host | Source | Antigen retrieval (buffer, microwave, interval) | Primary Ab | Secondary Ab | DAB+ Chromagen |
| von Willebrand factor | pAb | Rabbit anti human | Dako | Citrate buffer (0.01 M pH 6.0),700 W-10 min and 300W-10 min | 1:200, 30 min | 10 min | 1 min |
| vimentin | mAb (V9) | Mouse anti human | Dako | TE buffer (pH 9.0), 700 W-10 min and 400W-10 min | 1:150, 1 h | 10 min | 10 min |
| KIT | pAb | Rabbit anti human | Dako | TE buffer (pH 9.0),700 W-10 min and 400W-10 min | 1:400, 30 min | 10 min | 2 min |
pAb polyclonal antibody, mAb monoclonal antibody, TE buffer Tris-EDTA buffer solution
Sequences and locations of c-kit primers used in this study
| Designation | Sequence (5′-3′) | Primer location |
|---|---|---|
| 1F | CGATGAGAGGCGCTCGC | 27–34 |
| 1R | GGCGTAACACA TGAACACTCCAG | 891–913 |
| 2F | GCTGGCATCATGGTGACTTC | 819–838 |
| 2R | CATGGGTTTCTGTAGATACTTGTAGG | 1668–1693 |
| 3F | CACACCTTTGCTGATTGGCT | 1591–1610 |
| 3R | GATTCGACCATGAGTAAGGAGG | 2419–2440 |
| 4F | GGGTATGGCATTCCTGGC | 2359–2376 |
| 4R | GCTTCACACATCTTCGTGTACCA | 2937–2959 |
| AF | GCTCAGAGTCTATCGCAGCCACCG | 3–26 |
| AR | CTGCCTTCTCTGTGATCCATTCGTTG | 271–296 |
| BF | GCTGTCCAAGAAATTCACCCTG | 619–640 |
| BR | ATATTACTTTCATTGTCAGACTTGGG | 1124–1149 |
| CF | AAAACTCGTCTCTGTCACCGTCTG | 1422–1445 |
| CR | GATCTCCTCAACAACCTTCCACTG | 1691–1714 |
| DF | AAATCAGAGTTAATAGTCAGTGTCGG | 133–158 |
| DR | TTTATCCACATCGAGTCCACG | 729–749 |
| EX9F | CAACAATGTAGGCAGGAGTTCTG | 1495–1517 |
| EX9R | CAGCAAAGGTGTGAACAGGG | 1572–1591 |
F forward, R reverse
Annealing temperature dependent on combination of the primers: 55 °C for 1F and 1R, 56 °C for 2F and 2R, 52 °C for 3F and 3R, 61 °C for AF and AR, 54 °C for BF and BR, 57 °C for CF and CR, 54 °C for DF and DR, 57 °C for AF and BR, 55 °C for P2F and CR, 56 °C for CF and P3R, and 54 °C for EX9F and EX9R
Fig. 1Immunohistochemical staining for KIT. a Strong immunolabelling in the cytoplasm of Purkinje cells of a NCC was used as a positive control for KIT immunostaining. b Expression of KIT was not detected in a HA. c Strong immunoreactivities were observed inasplenic HSA with stage III and grade 3. d Positive immunoreactivities were observed ina cutaneous HSA with stage III and grade 2. Sections counterstained with hematoxylin. Bar = 50 μm
IHC analysis of vWF, vimentin and KIT expression in canine hemangiomas and hemangiosarcomas
vWF von Willebrand factor, HSAs hemangiosarcomas, HAs hemangiomas, Weak staining much weaker than positive control or negative, Moderate staining slightly weaker than positive control, Strong staining equal to positive control. -, not done. P values <0.05 indicate significant difference
Fig. 2Identification of sequence variations inc-kittranscript of canine HSAs. Following PCR amplification, sequences of amplicons were revealed by automated sequencing. a Distinct sequencing chromatograms of c-kit exon 9 were revealed between NCCand HSA samples. b The PCR products containing c-kit exon 9 were amplified from a NCCor a HSA and resolved in 3 % agarose gel. M, 100-bp DNA size markers. c Sequence alignment of two c-kit exon 9 variants. Dashed lines indicate deletion of nucleotides. Underlines indicate the deduced conserved di-nucleotide of splicing donors and acceptor sites
Fig. 3The frequency of c-kit exon 9 variants in canine tissues. a PCR products containing the exon 9 region amplified from 6 healthy canine cerebellums (left panel) or 12 canine HSAs (right panel) were electrophoresed with 3 % agarose gel. b The approximate frequency of the c-kit exon 9 variants was determined by cloning strategy. Numbers of colonies containing genotype representing wild type (grey bar), or 12-nt del (black bar) of exon 9 were summarized