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Literature DB >> 7063411

A catalogue of splice junction sequences.

Abstract

Splice junction sequences from a large number of nuclear and viral genes encoding protein have been collected. The sequence CAAG/GTAGAGT was found to be a consensus of 139 exon-intron boundaries (or donor sequences) and (TC)nNCTAG/G was found to be a consensus of 130 intron-exon boundaries (or acceptor sequences). The possible role of splice junction sequences as signals for processing is discussed.

Entities: Gene Species

Mesh：

Year: 1982 PMID： 7063411 PMCID： PMC326150 DOI： 10.1093/nar/10.2.459

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

63 in total

1. Sequences of five potential recombination sites encoded close to an immunoglobulin kappa constant region gene.

Authors: E E Max; J G Seidman; P Leder
Journal: Proc Natl Acad Sci U S A Date: 1979-07 Impact factor: 11.205

Review 2. RNA processing and the intervening sequence problem.

Authors: J Abelson
Journal: Annu Rev Biochem Date: 1979 Impact factor: 23.643

3. Sequences of mouse immunoglobulin light chain genes before and after somatic changes.

Authors: O Bernard; N Hozumi; S Tonegawa
Journal: Cell Date: 1978-12 Impact factor: 41.582

4. Domains and the hinge region of an immunoglobulin heavy chain are encoded in separate DNA segments.

Authors: H Sakano; J H Rogers; K Hüppi; C Brack; A Traunecker; R Maki; R Wall; S Tonegawa
Journal: Nature Date: 1979-02-22 Impact factor: 49.962

5. Sequence of a mouse germ-line gene for a variable region of an immunoglobulin light chain.

Authors: S Tonegawa; A M Maxam; R Tizard; O Bernard; W Gilbert
Journal: Proc Natl Acad Sci U S A Date: 1978-03 Impact factor: 11.205

6. The sequence of the chromosomal mouse beta-globin major gene: homologies in capping, splicing and poly(A) sites.

Authors: D A Konkel; S M Tilghman; P Leder
Journal: Cell Date: 1978-12 Impact factor: 41.582

7. Comparison of total sequence of a cloned rabbit beta-globin gene and its flanking regions with a homologous mouse sequence.

Authors: A van Ooyen; J van den Berg; N Mantei; C Weissmann
Journal: Science Date: 1979-10-19 Impact factor: 47.728

8. The structure and evolution of the two nonallelic rat preproinsulin genes.

Authors: P Lomedico; N Rosenthal; A Efstratidadis; W Gilbert; R Kolodner; R Tizard
Journal: Cell Date: 1979-10 Impact factor: 41.582

9. Ovalbumin gene: evidence for a leader sequence in mRNA and DNA sequences at the exon-intron boundaries.

Authors: R Breathnach; C Benoist; K O'Hare; F Gannon; P Chambon
Journal: Proc Natl Acad Sci U S A Date: 1978-10 Impact factor: 11.205

10. BKV splice sequences based on analysis of preferred donor and acceptor sites.

Authors: I Seif; G Khoury; R Dhar
Journal: Nucleic Acids Res Date: 1979-07-25 Impact factor: 16.971

1168 in total

1. Evidence for a linear search in bimolecular 3' splice site AG selection.

Authors: S Chen; K Anderson; M J Moore
Journal: Proc Natl Acad Sci U S A Date: 2000-01-18 Impact factor: 11.205

2. Role of the 3' splice site in U12-dependent intron splicing.

Authors: R C Dietrich; M J Peris; A S Seyboldt; R A Padgett
Journal: Mol Cell Biol Date: 2001-03 Impact factor: 4.272

3. Multiple splicing defects in an intronic false exon.

Authors: H Sun; L A Chasin
Journal: Mol Cell Biol Date: 2000-09 Impact factor: 4.272

4. Computational analysis of candidate intron regulatory elements for tissue-specific alternative pre-mRNA splicing.

Authors: M Brudno; M S Gelfand; S Spengler; M Zorn; I Dubchak; J G Conboy
Journal: Nucleic Acids Res Date: 2001-06-01 Impact factor: 16.971

5. Analysis of inhibitory action of modified U1 snRNAs on target gene expression: discrimination of two RNA targets differing by a 1 bp mismatch.

Authors: Peng Liu; Amy Gucwa; Mary Louise Stover; Emily Buck; Alexander Lichtler; David Rowe
Journal: Nucleic Acids Res Date: 2002-06-01 Impact factor: 16.971

Review 6. Genomic sequence, splicing, and gene annotation.

Authors: S M Mount
Journal: Am J Hum Genet Date: 2000-09-08 Impact factor: 11.025

7. Cloning, Sequence, and Expression Analysis of a New MnSOD-Encoding Gene from the Root-Knot Nematode Meloidogyne incognita.

Authors: Laura C Rosso
Journal: J Nematol Date: 2009-03 Impact factor: 1.402

8. Three spliced mRNAs of TT virus transcribed from a plasmid containing the entire genome in COS1 cells.

Authors: T Kamahora; S Hino; H Miyata
Journal: J Virol Date: 2000-11 Impact factor: 5.103

9. Model for tissue specific Calcitonin/CGRP-I RNA processing from in vitro experiments.

Authors: R A Bovenberg; G J Adema; H S Jansz; P D Baas
Journal: Nucleic Acids Res Date: 1988-08-25 Impact factor: 16.971

10. Donor splice site mutation in the apolipoprotein (Apo) C-II gene (Apo C-IIHamburg) of a patient with Apo C-II deficiency.

Authors: S S Fojo; U Beisiegel; U Beil; K Higuchi; M Bojanovski; R E Gregg; H Greten; H B Brewer
Journal: J Clin Invest Date: 1988-11 Impact factor: 14.808