| Literature DB >> 27400764 |
Chandan Karmakar1, Wei Luo, Truyen Tran, Michael Berk, Svetha Venkatesh.
Abstract
BACKGROUND: Although physical illnesses, routinely documented in electronic medical records (EMR), have been found to be a contributing factor to suicides, no automated systems use this information to predict suicide risk.Entities:
Keywords: ICD-10 codes; electronic medical record; history of physical illnesses; suicide risk; suicide risk prediction model
Year: 2016 PMID: 27400764 PMCID: PMC4960407 DOI: 10.2196/mental.5475
Source DB: PubMed Journal: JMIR Ment Health ISSN: 2368-7959
Figure 1Equation 1.
Figure 2Time periods used to extract the history of physical illnesses from EMR and the suicide risk prediction horizon.
Figure 3Equation 4.
Figure 4Equation 7.
Figure 5Equations 8 and 9.
Figure 6Equation 10.
Distribution of physical illnesses according to ICD-10 category (without chapter V-Mental and behavioral disorders) in control and risk groups over five different time ranges.
| τ=1 (0-3 months) | τ=2 (0-6 months) | τ=3 (0-12 months) | τ=4 (0-24 months) | τ=5 (0-48 months) | ||||||||||||||||
| Control | Risk | Control | Risk | Control | Risk | Control | Risk | Control | Risk | |||||||||||
| n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | |
| No | 8112 | 54.86 | 557 | 26.88 | 6909 | 46.73 | 413 | 19.93 | 5545 | 37.50 | 250 | 12.07 | 3992 | 27.00 | 162 | 7.82 | 2501 | 16.91 | 85 | 4.10 |
| Yes | 6674 | 45.14 | 1515 | 73.12 | 7877 | 53.27 | 1659 | 80.07 | 9241 | 62.50 | 1822 | 87.93 | 10794 | 73.00 | 1910 | 92.18 | 12285 | 83.09 | 1987 | 95.90 |
| 0 | 8112 | 54.86 | 557 | 26.88 | 6909 | 46.73 | 413 | 19.93 | 5545 | 37.50 | 250 | 12.07 | 3992 | 27.00 | 162 | 7.82 | 2501 | 16.91 | 85 | 4.10 |
| 1-2 | 2914 | 19.71 | 500 | 24.13 | 2925 | 19.78 | 430 | 20.75 | 2881 | 19.48 | 365 | 17.62 | 2733 | 18.48 | 238 | 11.49 | 2517 | 17.02 | 179 | 8.64 |
| 3-5 | 1641 | 11.1 | 319 | 15.40 | 1870 | 12.65 | 305 | 14.72 | 2044 | 13.82 | 277 | 13.37 | 2213 | 14.97 | 254 | 12.26 | 2379 | 16.09 | 216 | 10.42 |
| 6-10 | 1317 | 8.91 | 356 | 17.18 | 1666 | 11.27 | 315 | 15.20 | 1999 | 13.52 | 332 | 16.02 | 2286 | 15.46 | 336 | 16.22 | 2532 | 17.12 | 267 | 12.89 |
| 11-20 | 657 | 4.44 | 247 | 11.92 | 1028 | 6.95 | 366 | 17.66 | 1499 | 10.14 | 345 | 16.65 | 2089 | 14.13 | 386 | 18.63 | 2338 | 15.81 | 383 | 18.48 |
| >20 | 145 | 0.98 | 93 | 4.49 | 388 | 2.62 | 243 | 11.73 | 818 | 5.53 | 503 | 24.28 | 1473 | 9.96 | 696 | 33.59 | 2519 | 17.04 | 942 | 45.46 |
Figure 7Distribution of assessments with respect to frequencies of ICD-codes (without chapter V-Mental and behavioral disorders) and time periods. Different color represents the frequencies of ICD-codes.
Distribution of suicide risk and control cases associated with diagnostic groups according to ICD-10 category for five different time ranges.
| Control | Risk | Control | Risk | Control | Risk | Control | Risk | Control | Risk | ||||||||||
| n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % | n | % |
| 440 | 2.98 | 73 | 3.52 | 638 | 4.31 | 115 | 5.55 | 944 | 6.38 | 157 | 7.58 | 1352 | 9.14 | 259 | 12.5 | 1816 | 12.28 | 346 | 16.7 |
| 28 | 0.19 | 1 | 0.05 | 45 | 0.30 | 5 | 0.24 | 67 | 0.45 | 7 | 0.34 | 131 | 0.89 | 10 | 0.48 | 194 | 1.31 | 17 | 0.82 |
| 142 | 0.96 | 22 | 1.06 | 190 | 1.28 | 25 | 1.21 | 269 | 1.82 | 47 | 2.27 | 417 | 2.82 | 78 | 3.76 | 577 | 3.90 | 100 | 4.83 |
| 724 | 4.90 | 165 | 7.96 | 994 | 6.72 | 252 | 12.16 | 1331 | 9.00 | 340 | 16.41 | 1740 | 11.77 | 420 | 20.27 | 2223 | 15.03 | 483 | 23.31 |
| 230 | 1.56 | 60 | 2.90 | 324 | 2.19 | 79 | 3.81 | 454 | 3.07 | 104 | 5.02 | 599 | 4.05 | 134 | 6.47 | 858 | 5.80 | 166 | 8.01 |
| 16 | 0.11 | 1 | 0.05 | 26 | 0.18 | 1 | 0.05 | 46 | 0.31 | 3 | 0.14 | 102 | 0.69 | 9 | 0.43 | 184 | 1.24 | 9 | 0.43 |
| 748 | 5.06 | 120 | 5.79 | 1022 | 6.91 | 163 | 7.87 | 1347 | 9.11 | 220 | 10.62 | 1766 | 11.94 | 291 | 14.04 | 2329 | 15.75 | 426 | 20.56 |
| 548 | 3.71 | 53 | 2.56 | 700 | 4.73 | 88 | 4.25 | 898 | 6.07 | 142 | 6.85 | 1199 | 8.11 | 216 | 10.42 | 1533 | 10.37 | 282 | 13.61 |
| 534 | 3.61 | 154 | 7.43 | 790 | 5.34 | 227 | 10.96 | 1145 | 7.74 | 297 | 14.33 | 1650 | 11.16 | 384 | 18.53 | 2347 | 15.87 | 502 | 24.23 |
| 188 | 1.27 | 37 | 1.79 | 257 | 1.74 | 51 | 2.46 | 345 | 2.33 | 71 | 3.43 | 521 | 3.52 | 113 | 5.45 | 755 | 5.11 | 166 | 8.01 |
| 428 | 2.89 | 138 | 6.66 | 699 | 4.73 | 171 | 8.25 | 1004 | 6.79 | 256 | 12.36 | 1412 | 9.55 | 361 | 17.42 | 2037 | 13.78 | 471 | 22.73 |
| 444 | 3.00 | 57 | 2.75 | 598 | 4.04 | 86 | 4.15 | 844 | 5.71 | 113 | 5.45 | 1098 | 7.43 | 183 | 8.83 | 1389 | 9.39 | 237 | 11.44 |
| 90 | 0.61 | 8 | 0.39 | 152 | 1.03 | 15 | 0.72 | 216 | 1.46 | 45 | 2.17 | 386 | 2.61 | 85 | 4.10 | 617 | 4.17 | 114 | 5.50 |
| 2079 | 14.06 | 547 | 26.40 | 2804 | 18.96 | 759 | 36.63 | 3660 | 24.75 | 978 | 47.20 | 4690 | 31.72 | 1125 | 54.3 | 6041 | 40.86 | 1311 | 63.27 |
| 1677 | 11.34 | 574 | 27.70 | 2175 | 14.71 | 729 | 35.18 | 2934 | 19.84 | 946 | 45.66 | 4023 | 27.21 | 1095 | 52.85 | 5205 | 35.20 | 1254 | 60.52 |
| 1315 | 8.89 | 495 | 23.89 | 1867 | 12.63 | 668 | 32.24 | 2727 | 18.44 | 872 | 42.08 | 3912 | 26.46 | 1064 | 51.35 | 5169 | 34.96 | 1260 | 60.81 |
| 3013 | 20.38 | 814 | 39.29 | 3911 | 26.45 | 1010 | 48.75 | 5053 | 34.17 | 1231 | 59.41 | 6476 | 43.80 | 1470 | 70.95 | 7916 | 53.54 | 1624 | 78.38 |
| 989 | 6.69 | 455 | 21.96 | 1391 | 9.41 | 595 | 28.72 | 2086 | 14.11 | 808 | 39.00 | 3070 | 20.76 | 984 | 47.49 | 4106 | 27.77 | 1165 | 56.23 |
Figure 8Cumulative percentage of cases in control and suicide risk groups over five time-periods grouped on ICD-10 category (Excluded chapters: chapter V-Mental and behavioral disorders, chapter XVI-Certain conditions originating in the perinatal period, and chapter XVII-Congenital malformations, deformations and chromosomal abnormalities).
AUC obtained using suicide risk scoring model based on physical illnesses, clinically assessed score and their combinations.
| Length of history | AUC | ||
| 0-3 months (τ=1) | 0.64 | 0.56 | 0.65 |
| 0-6 months (τ=2) | 0.67 | 0.56 | 0.67 |
| 0-12 months (τ=3) | 0.68 | 0.56 | 0.68 |
| 0-24 months (τ=4) | 0.68 | 0.56 | 0.69 |
| 0-48 months (τ=5) | 0.69 | 0.56 | 0.70 |
| Combined τ (1, 2, … 5) | 0.71 | 0.56 | 0.72 |