Literature DB >> 27385206

Modular Artificial Cupredoxins.

Samuel I Mann1, Tillmann Heinisch2, Andrew C Weitz3, Michael P Hendrich3, Thomas R Ward2, A S Borovik1.   

Abstract

Cupredoxins are electron-transfer proteins that have active sites containing a mononuclear Cu center with an unusual trigonal monopyramidal structure (Type 1 Cu). A single Cu-Scys bond is present within the trigonal plane that is responsible for its unique physical properties. We demonstrate that a cysteine-containing variant of streptavidin (Sav) can serve as a protein host to model the structure and properties of Type 1 Cu sites. A series of artificial Cu proteins are described that rely on Sav and a series of biotinylated synthetic Cu complexes. Optical and EPR measurements highlight the presence of a Cu-Scys bond, and XRD analysis provides structural evidence. We further provide evidence that changes in the linker between the biotin and Cu complex within the synthetic constructs allows for small changes in the placement of Cu centers within Sav that have dramatic effects on the structural and physical properties of the resulting artificial metalloproteins. These findings highlight the utility of the biotin-Sav technology as an approach for simulating active sites of metalloproteins.

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Year:  2016        PMID: 27385206      PMCID: PMC5110120          DOI: 10.1021/jacs.6b05428

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  24 in total

1.  Supramolecular Assembly of Artificial Metalloenzymes Based on the Dimeric Protein LmrR as Promiscuous Scaffold.

Authors:  Jeffrey Bos; Wesley R Browne; Arnold J M Driessen; Gerard Roelfes
Journal:  J Am Chem Soc       Date:  2015-08-04       Impact factor: 15.419

2.  A designed supramolecular protein assembly with in vivo enzymatic activity.

Authors:  Woon Ju Song; F Akif Tezcan
Journal:  Science       Date:  2014-12-19       Impact factor: 47.728

3.  Molecular designs for controlling the local environments around metal ions.

Authors:  Sarah A Cook; A S Borovik
Journal:  Acc Chem Res       Date:  2015-07-16       Impact factor: 22.384

4.  Role of the secondary coordination sphere in metal-mediated dioxygen activation.

Authors:  Ryan L Shook; A S Borovik
Journal:  Inorg Chem       Date:  2010-04-19       Impact factor: 5.165

5.  Structural origins of high-affinity biotin binding to streptavidin.

Authors:  P C Weber; D H Ohlendorf; J J Wendoloski; F R Salemme
Journal:  Science       Date:  1989-01-06       Impact factor: 47.728

6.  Artificial metalloenzymes: (strept)avidin as host for enantioselective hydrogenation by achiral biotinylated rhodium-diphosphine complexes.

Authors:  Myriem Skander; Nicolas Humbert; Jérôme Collot; Julieta Gradinaru; Gérard Klein; Andreas Loosli; Jérôme Sauser; Andrea Zocchi; François Gilardoni; Thomas R Ward
Journal:  J Am Chem Soc       Date:  2004-11-10       Impact factor: 15.419

7.  Selective DNA strand scission with binuclear copper complexes: implications for an active Cu2-O2 species.

Authors:  Sunita Thyagarajan; Narasimha N Murthy; Amy A Narducci Sarjeant; Kenneth D Karlin; Steve E Rokita
Journal:  J Am Chem Soc       Date:  2006-05-31       Impact factor: 15.419

8.  Rack-induced metal binding vs. flexibility: Met121His azurin crystal structures at different pH.

Authors:  A Messerschmidt; L Prade; S J Kroes; J Sanders-Loehr; R Huber; G W Canters
Journal:  Proc Natl Acad Sci U S A       Date:  1998-03-31       Impact factor: 11.205

9.  De novo design and characterization of copper metallopeptides inspired by native cupredoxins.

Authors:  Jefferson S Plegaria; Matteo Duca; Cédric Tard; Thomas J Friedlander; Aniruddha Deb; James E Penner-Hahn; Vincent L Pecoraro
Journal:  Inorg Chem       Date:  2015-09-18       Impact factor: 5.165

10.  Structure of azurin from Alcaligenes denitrificans refinement at 1.8 A resolution and comparison of the two crystallographically independent molecules.

Authors:  E N Baker
Journal:  J Mol Biol       Date:  1988-10-20       Impact factor: 5.469

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  12 in total

1.  Artificial Metalloproteins Containing Co4O4 Cubane Active Sites.

Authors:  Lisa Olshansky; Raúl Huerta-Lavorie; Andy I Nguyen; Jaicy Vallapurackal; Ariel Furst; T Don Tilley; A S Borovik
Journal:  J Am Chem Soc       Date:  2018-02-13       Impact factor: 15.419

2.  Redesign of a Copper Storage Protein into an Artificial Hydrogenase.

Authors:  Dhanashree Selvan; Pallavi Prasad; Erik R Farquhar; Yelu Shi; Skyler Crane; Yong Zhang; Saumen Chakraborty
Journal:  ACS Catal       Date:  2019-05-16       Impact factor: 13.084

3.  Traversing the Red-Green-Blue Color Spectrum in Rationally Designed Cupredoxins.

Authors:  Karl J Koebke; Victor Sosa Alfaro; Tyler B J Pinter; Aniruddha Deb; Nicolai Lehnert; Cédric Tard; James E Penner-Hahn; Vincent L Pecoraro
Journal:  J Am Chem Soc       Date:  2020-08-24       Impact factor: 15.419

4.  Rational Design of a Histidine-Methionine Site Modeling the M-Center of Copper Monooxygenases in a Small Metallochaperone Scaffold.

Authors:  Katherine B Alwan; Evan F Welch; Renee J Arias; Ben F Gambill; Ninian J Blackburn
Journal:  Biochemistry       Date:  2019-06-27       Impact factor: 3.162

5.  Peroxide Activation Regulated by Hydrogen Bonds within Artificial Cu Proteins.

Authors:  Samuel I Mann; Tillmann Heinisch; Thomas R Ward; A S Borovik
Journal:  J Am Chem Soc       Date:  2017-11-15       Impact factor: 15.419

6.  Artificial Iron Proteins: Modeling the Active Sites in Non-Heme Dioxygenases.

Authors:  Kelsey R Miller; Jonathan D Paretsky; Alec H Follmer; Tillmann Heinisch; Kaustuv Mittra; Sheraz Gul; In-Sik Kim; Franklin D Fuller; Alexander Batyuk; Kyle D Sutherlin; Aaron S Brewster; Asmit Bhowmick; Nicholas K Sauter; Jan Kern; Junko Yano; Michael T Green; Thomas R Ward; A S Borovik
Journal:  Inorg Chem       Date:  2020-04-20       Impact factor: 5.165

7.  Coordination chemistry within a protein host: regulation of the secondary coordination sphere.

Authors:  Samuel I Mann; Tillmann Heinisch; Thomas R Ward; A S Borovik
Journal:  Chem Commun (Camb)       Date:  2018-04-26       Impact factor: 6.222

8.  Clarifying the Copper Coordination Environment in a de Novo Designed Red Copper Protein.

Authors:  Karl J Koebke; Leela Ruckthong; Jennifer L Meagher; Emilie Mathieu; Jill Harland; Aniruddha Deb; Nicolai Lehnert; Clotilde Policar; Cédric Tard; James E Penner-Hahn; Jeanne A Stuckey; Vincent L Pecoraro
Journal:  Inorg Chem       Date:  2018-09-18       Impact factor: 5.165

9.  Artificial Metalloproteins with Dinuclear Iron-Hydroxido Centers.

Authors:  Kelsey R Miller; Saborni Biswas; Andrew Jasniewski; Alec H Follmer; Ankita Biswas; Therese Albert; Sinan Sabuncu; Emile L Bominaar; Michael P Hendrich; Pierre Moënne-Loccoz; A S Borovik
Journal:  J Am Chem Soc       Date:  2021-02-02       Impact factor: 15.419

Review 10.  Computational approaches for de novo design and redesign of metal-binding sites on proteins.

Authors:  Gunseli Bayram Akcapinar; Osman Ugur Sezerman
Journal:  Biosci Rep       Date:  2017-03-27       Impact factor: 3.840

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