Literature DB >> 27374333

Compositional Control of Phase-Separated Cellular Bodies.

Salman F Banani1, Allyson M Rice1, William B Peeples1, Yuan Lin1, Saumya Jain2, Roy Parker2, Michael K Rosen3.   

Abstract

Cellular bodies such as P bodies and PML nuclear bodies (PML NBs) appear to be phase-separated liquids organized by multivalent interactions among proteins and RNA molecules. Although many components of various cellular bodies are known, general principles that define body composition are lacking. We modeled cellular bodies using several engineered multivalent proteins and RNA. In vitro and in cells, these scaffold molecules form phase-separated liquids that concentrate low valency client proteins. Clients partition differently depending on the ratio of scaffolds, with a sharp switch across the phase diagram diagonal. Composition can switch rapidly through changes in scaffold concentration or valency. Natural PML NBs and P bodies show analogous partitioning behavior, suggesting how their compositions could be controlled by levels of PML SUMOylation or cellular mRNA concentration, respectively. The data suggest a conceptual framework for considering the composition and control thereof of cellular bodies assembled through heterotypic multivalent interactions.
Copyright © 2016 Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 27374333      PMCID: PMC4967043          DOI: 10.1016/j.cell.2016.06.010

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  67 in total

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Journal:  Cell       Date:  2012-06-08       Impact factor: 41.582

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Authors:  Carolyn J Decker; Roy Parker
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-09-01       Impact factor: 10.005

3.  De novo formation of a subnuclear body.

Authors:  Trish E Kaiser; Robert V Intine; Miroslav Dundr
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4.  Structural and functional roles of Daxx SIM phosphorylation in SUMO paralog-selective binding and apoptosis modulation.

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Journal:  Mol Cell       Date:  2011-04-08       Impact factor: 17.970

5.  Structural and functional characterization of the phosphorylation-dependent interaction between PML and SUMO1.

Authors:  Laurent Cappadocia; Xavier H Mascle; Véronique Bourdeau; Samuel Tremblay-Belzile; Malik Chaker-Margot; Mathieu Lussier-Price; Junya Wada; Kazuyasu Sakaguchi; Muriel Aubry; Gerardo Ferbeyre; James G Omichinski
Journal:  Structure       Date:  2014-12-11       Impact factor: 5.006

Review 6.  Complexes of sequential metabolic enzymes.

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7.  Cajal bodies, nucleoli, and speckles in the Xenopus oocyte nucleus have a low-density, sponge-like structure.

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9.  Phosphorylation-regulated binding of RNA polymerase II to fibrous polymers of low-complexity domains.

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  332 in total

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Journal:  Curr Top Dev Biol       Date:  2020-03-09       Impact factor: 4.897

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Journal:  Elife       Date:  2020-06-19       Impact factor: 8.140

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5.  Chronic optogenetic induction of stress granules is cytotoxic and reveals the evolution of ALS-FTD pathology.

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Journal:  Elife       Date:  2019-03-20       Impact factor: 8.140

6.  Phase Separation of Toxic Dipeptide Repeat Proteins Related to C9orf72 ALS/FTD.

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7.  Effect of SUMO-SIM Interaction on the ICP0-Mediated Degradation of PML Isoform II and Its Associated Proteins in Herpes Simplex Virus 1 Infection.

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Review 9.  SUMO-Mediated Regulation of Nuclear Functions and Signaling Processes.

Authors:  Xiaolan Zhao
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Review 10.  The Pathophysiology of Tau and Stress Granules in Disease.

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