Literature DB >> 27362366

ADAR1 deletion induces NFκB and interferon signaling dependent liver inflammation and fibrosis.

Shirley Oren Ben-Shoshan1,2, Polina Kagan3,2, Maya Sultan3, Zohar Barabash1, Chen Dor1, Jasmine Jacob-Hirsch1,4, Alon Harmelin5, Orit Pappo6, Victoria Marcu-Malina1, Ziv Ben-Ari3,2, Ninette Amariglio1,4, Gideon Rechavi1,2, Itamar Goldstein1,2, Michal Safran3.   

Abstract

Adenosine deaminase acting on RNA (ADAR) 1 binds and edits double-stranded (ds) RNA secondary structures found mainly within untranslated regions of many transcripts. In the current research, our aim was to study the role of ADAR1 in liver homeostasis. As previous studies show a conserved immunoregulatory function for ADAR1 in mammalians, we focused on its role in preventing chronic hepatic inflammation and the associated activation of hepatic stellate cells to produce extracellular matrix and promote fibrosis. We show that hepatocytes specific ADAR1 knock out (KO) mice display massive liver damage with multifocal inflammation and fibrogenesis. The bioinformatics analysis of the microarray gene-expression datasets of ADAR1 KO livers reveled a type-I interferons signature and an enrichment for immune response genes compared to control littermate livers. Furthermore, we found that in vitro silencing of ADAR1 expression in HepG2 cells leads to enhanced transcription of NFκB target genes, foremost of the pro-inflammatory cytokines IL6 and IL8. We also discovered immune cell-independent paracrine signaling among ADAR1-depleted HepG2 cells and hepatic stellate cells, leading to the activation of the latter cell type to adopt a profibrogenic phenotype. This paracrine communication dependent mainly on the production and secretion of the cytokine IL6 induced by ADAR1 silencing in hepatocytes. Thus, our findings shed a new light on the vital regulatory role of ADAR1 in hepatic immune homeostasis, chiefly its inhibitory function on the crosstalk between the NFκB and type-I interferons signaling cascades, restraining the development of liver inflammation and fibrosis.

Entities:  

Keywords:  ADAR1; Interleukin 6 (IL6); RNA editing; epitranscriptome; fibrosis; hepatic stellate cells; inflammation; interferon; liver; NFκB pathway

Mesh:

Substances:

Year:  2016        PMID: 27362366      PMCID: PMC5449086          DOI: 10.1080/15476286.2016.1203501

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  37 in total

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Journal:  Semin Liver Dis       Date:  2001-08       Impact factor: 6.115

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Authors:  Kazuko Nishikura
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

Review 5.  Inflammation meets cancer, with NF-κB as the matchmaker.

Authors:  Yinon Ben-Neriah; Michael Karin
Journal:  Nat Immunol       Date:  2011-07-19       Impact factor: 25.606

6.  IL-6 induces hepatic inflammation and collagen synthesis in vivo.

Authors:  I Choi; H S Kang; Y Yang; K H Pyun
Journal:  Clin Exp Immunol       Date:  1994-03       Impact factor: 4.330

7.  The RNA-editing enzyme ADAR1 controls innate immune responses to RNA.

Authors:  Niamh M Mannion; Sam M Greenwood; Robert Young; Sarah Cox; James Brindle; David Read; Christoffer Nellåker; Cornelia Vesely; Chris P Ponting; Paul J McLaughlin; Michael F Jantsch; Julia Dorin; Ian R Adams; A D J Scadden; Marie Ohman; Liam P Keegan; Mary A O'Connell
Journal:  Cell Rep       Date:  2014-11-13       Impact factor: 9.423

8.  Clinical and molecular phenotype of Aicardi-Goutieres syndrome.

Authors:  Gillian Rice; Teresa Patrick; Rekha Parmar; Claire F Taylor; Alec Aeby; Jean Aicardi; Rafael Artuch; Simon Attard Montalto; Carlos A Bacino; Bruno Barroso; Peter Baxter; Willam S Benko; Carsten Bergmann; Enrico Bertini; Roberta Biancheri; Edward M Blair; Nenad Blau; David T Bonthron; Tracy Briggs; Louise A Brueton; Han G Brunner; Christopher J Burke; Ian M Carr; Daniel R Carvalho; Kate E Chandler; Hans-Jurgen Christen; Peter C Corry; Frances M Cowan; Helen Cox; Stefano D'Arrigo; John Dean; Corinne De Laet; Claudine De Praeter; Catherine Dery; Colin D Ferrie; Kim Flintoff; Suzanna G M Frints; Angels Garcia-Cazorla; Blanca Gener; Cyril Goizet; Francoise Goutieres; Andrew J Green; Agnes Guet; Ben C J Hamel; Bruce E Hayward; Arvid Heiberg; Raoul C Hennekam; Marie Husson; Andrew P Jackson; Rasieka Jayatunga; Yong-Hui Jiang; Sarina G Kant; Amy Kao; Mary D King; Helen M Kingston; Joerg Klepper; Marjo S van der Knaap; Andrew J Kornberg; Dieter Kotzot; Wilfried Kratzer; Didier Lacombe; Lieven Lagae; Pierre Georges Landrieu; Giovanni Lanzi; Andrea Leitch; Ming J Lim; John H Livingston; Charles M Lourenco; E G Hermione Lyall; Sally A Lynch; Michael J Lyons; Daphna Marom; John P McClure; Robert McWilliam; Serge B Melancon; Leena D Mewasingh; Marie-Laure Moutard; Ken K Nischal; John R Ostergaard; Julie Prendiville; Magnhild Rasmussen; R Curtis Rogers; Dominique Roland; Elisabeth M Rosser; Kevin Rostasy; Agathe Roubertie; Amparo Sanchis; Raphael Schiffmann; Sabine Scholl-Burgi; Sunita Seal; Stavit A Shalev; C Sierra Corcoles; Gyan P Sinha; Doriette Soler; Ronen Spiegel; John B P Stephenson; Uta Tacke; Tiong Yang Tan; Marianne Till; John L Tolmie; Pam Tomlin; Federica Vagnarelli; Enza Maria Valente; Rudy N A Van Coster; Nathalie Van der Aa; Adeline Vanderver; Johannes S H Vles; Thomas Voit; Evangeline Wassmer; Bernhard Weschke; Margo L Whiteford; Michel A A Willemsen; Andreas Zankl; Sameer M Zuberi; Simona Orcesi; Elisa Fazzi; Pierre Lebon; Yanick J Crow
Journal:  Am J Hum Genet       Date:  2007-09-04       Impact factor: 11.025

9.  Evidence for large diversity in the human transcriptome created by Alu RNA editing.

Authors:  Michal Barak; Erez Y Levanon; Eli Eisenberg; Nurit Paz; Gideon Rechavi; George M Church; Ramit Mehr
Journal:  Nucleic Acids Res       Date:  2009-09-08       Impact factor: 16.971

10.  A-to-I RNA editing occurs at over a hundred million genomic sites, located in a majority of human genes.

Authors:  Lily Bazak; Ami Haviv; Michal Barak; Jasmine Jacob-Hirsch; Patricia Deng; Rui Zhang; Farren J Isaacs; Gideon Rechavi; Jin Billy Li; Eli Eisenberg; Erez Y Levanon
Journal:  Genome Res       Date:  2013-12-17       Impact factor: 9.043

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  12 in total

1.  RNA in Disease and development.

Authors:  Andrea Barta; Michael F Jantsch
Journal:  RNA Biol       Date:  2017-05-04       Impact factor: 4.652

2.  RNA-editing enzymes ADAR1 and ADAR2 coordinately regulate the editing and expression of Ctn RNA.

Authors:  Aparna Anantharaman; Omid Gholamalamdari; Abid Khan; Je-Hyun Yoon; Michael F Jantsch; Jochen C Hartner; Myriam Gorospe; Supriya G Prasanth; Kannanganattu V Prasanth
Journal:  FEBS Lett       Date:  2017-08-30       Impact factor: 4.124

3.  ADAR1-mediated RNA editing is required for thymic self-tolerance and inhibition of autoimmunity.

Authors:  Taisuke Nakahama; Yuki Kato; Jung In Kim; Tuangtong Vongpipatana; Yutaka Suzuki; Carl R Walkley; Yukio Kawahara
Journal:  EMBO Rep       Date:  2018-10-25       Impact factor: 8.807

Review 4.  Rewriting the transcriptome: adenosine-to-inosine RNA editing by ADARs.

Authors:  Carl R Walkley; Jin Billy Li
Journal:  Genome Biol       Date:  2017-10-30       Impact factor: 13.583

5.  RNA editing by ADAR1 leads to context-dependent transcriptome-wide changes in RNA secondary structure.

Authors:  Oz Solomon; Ayelet Di Segni; Karen Cesarkas; Hagit T Porath; Victoria Marcu-Malina; Orel Mizrahi; Noam Stern-Ginossar; Nitzan Kol; Sarit Farage-Barhom; Efrat Glick-Saar; Yaniv Lerenthal; Erez Y Levanon; Ninette Amariglio; Ron Unger; Itamar Goldstein; Eran Eyal; Gidi Rechavi
Journal:  Nat Commun       Date:  2017-11-13       Impact factor: 14.919

6.  Both MAPK and STAT3 signal transduction pathways are necessary for IL-6-dependent hepatic stellate cells activation.

Authors:  Polina Kagan; Maya Sultan; Irina Tachlytski; Michal Safran; Ziv Ben-Ari
Journal:  PLoS One       Date:  2017-05-04       Impact factor: 3.240

7.  ADAR1 is vital for B cell lineage development in the mouse bone marrow.

Authors:  Victoria Marcu-Malina; Sanja Goldberg; Einav Vax; Ninette Amariglio; Itamar Goldstein; Gideon Rechavi
Journal:  Oncotarget       Date:  2016-08-23

8.  ADAR1 polymorphisms are related to severity of liver fibrosis in HIV/HCV-coinfected patients.

Authors:  Luz M Medrano; Juan Berenguer; María A Jiménez-Sousa; Teresa Aldámiz-Echevarria; Francisco Tejerina; Cristina Diez; Lorena Vigón; Amanda Fernández-Rodríguez; Salvador Resino
Journal:  Sci Rep       Date:  2017-10-10       Impact factor: 4.379

9.  PTEN Inhibits Inflammatory Bone Loss in Ligature-Induced Periodontitis via IL1 and TNF-α.

Authors:  Chuanyun Fu; Zhimin Wei; Dongsheng Zhang
Journal:  Biomed Res Int       Date:  2019-11-30       Impact factor: 3.411

Review 10.  The Role of the Z-DNA Binding Domain in Innate Immunity and Stress Granules.

Authors:  De Chen Chiang; Yan Li; Siew Kit Ng
Journal:  Front Immunol       Date:  2021-02-03       Impact factor: 7.561

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