Literature DB >> 33613567

The Role of the Z-DNA Binding Domain in Innate Immunity and Stress Granules.

De Chen Chiang1,2, Yan Li3, Siew Kit Ng1,3.   

Abstract

Both DNA and RNA can maintain left-handed double helical Z-conformation under physiological condition, but only when stabilized by Z-DNA binding domain (ZDBD). After initial discovery in RNA editing enzyme ADAR1, ZDBD has also been described in pathogen-sensing proteins ZBP1 and PKZ in host, as well as virulence proteins E3L and ORF112 in viruses. The host-virus antagonism immediately highlights the importance of ZDBD in antiviral innate immunity. Furthermore, Z-RNA binding has been shown to be responsible for the localization of these ZDBD-containing proteins to cytoplasmic stress granules that play central role in coordinating cellular response to stresses. This review sought to consolidate current understanding of Z-RNA sensing in innate immunity and implore possible roles of Z-RNA binding within cytoplasmic stress granules.
Copyright © 2021 Chiang, Li and Ng.

Entities:  

Keywords:  ADAR1; E3L; PKZ; Z-DNA binding domain; Z-RNA; ZBP1; innate immunity; stress granules

Year:  2021        PMID: 33613567      PMCID: PMC7886975          DOI: 10.3389/fimmu.2020.625504

Source DB:  PubMed          Journal:  Front Immunol        ISSN: 1664-3224            Impact factor:   7.561


  138 in total

1.  The zalpha domain of the editing enzyme dsRNA adenosine deaminase binds left-handed Z-RNA as well as Z-DNA.

Authors:  B A Brown; K Lowenhaupt; C M Wilbert; E B Hanlon; A Rich
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-05       Impact factor: 11.205

2.  Alternate rRNA secondary structures as regulators of translation.

Authors:  Shu Feng; Heng Li; Jing Zhao; Konstantin Pervushin; Ky Lowenhaupt; Thomas U Schwartz; Peter Dröge
Journal:  Nat Struct Mol Biol       Date:  2011-01-09       Impact factor: 15.369

3.  The Structure of the Cyprinid herpesvirus 3 ORF112-Zα·Z-DNA Complex Reveals a Mechanism of Nucleic Acids Recognition Conserved with E3L, a Poxvirus Inhibitor of Interferon Response.

Authors:  Krzysztof Kuś; Krzysztof Rakus; Maxime Boutier; Theokliti Tsigkri; Luisa Gabriel; Alain Vanderplasschen; Alekos Athanasiadis
Journal:  J Biol Chem       Date:  2015-11-11       Impact factor: 5.157

4.  A PKR-like eukaryotic initiation factor 2alpha kinase from zebrafish contains Z-DNA binding domains instead of dsRNA binding domains.

Authors:  Stefan Rothenburg; Nikolaus Deigendesch; Katharina Dittmar; Friedrich Koch-Nolte; Friedrich Haag; Ky Lowenhaupt; Alexander Rich
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-19       Impact factor: 11.205

5.  CRM1 mediates the export of ADAR1 through a nuclear export signal within the Z-DNA binding domain.

Authors:  H Poulsen; J Nilsson; C K Damgaard; J Egebjerg; J Kjems
Journal:  Mol Cell Biol       Date:  2001-11       Impact factor: 4.272

6.  Molecular cloning and characterisation of a fish PKR-like gene from cultured CAB cells induced by UV-inactivated virus.

Authors:  Cheng-Yu Hu; Yi-Bing Zhang; Guo-Ping Huang; Qi-Ya Zhang; Jian-Fang Gui
Journal:  Fish Shellfish Immunol       Date:  2004-10       Impact factor: 4.581

7.  Inhibition of PKR by vaccinia virus: role of the N- and C-terminal domains of E3L.

Authors:  Jeffrey O Langland; Bertram L Jacobs
Journal:  Virology       Date:  2004-07-01       Impact factor: 3.616

8.  Double-stranded RNAs containing multiple IU pairs are sufficient to suppress interferon induction and apoptosis.

Authors:  Patrice Vitali; A D J Scadden
Journal:  Nat Struct Mol Biol       Date:  2010-08-08       Impact factor: 15.369

9.  MicroRNA profiling of human primary macrophages exposed to dengue virus identifies miRNA-3614-5p as antiviral and regulator of ADAR1 expression.

Authors:  Mayra Diosa-Toro; Liliana Echavarría-Consuegra; Jacky Flipse; Geysson Javier Fernández; Joost Kluiver; Anke van den Berg; Silvio Urcuqui-Inchima; Jolanda M Smit
Journal:  PLoS Negl Trop Dis       Date:  2017-10-18

10.  ADAR1-mediated RNA editing is a novel oncogenic process in thyroid cancer and regulates miR-200 activity.

Authors:  Julia Ramírez-Moya; Allison R Baker; Frank J Slack; Pilar Santisteban
Journal:  Oncogene       Date:  2020-03-10       Impact factor: 9.867

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  2 in total

1.  Stress Granule-Mediated Oxidized RNA Decay in P-Body: Hypothetical Role of ADAR1, Tudor-SN, and STAU1.

Authors:  Ravi Kumar Alluri; Zhongwei Li; Keith R McCrae
Journal:  Front Mol Biosci       Date:  2021-06-04

2.  Searching for New Z-DNA/Z-RNA Binding Proteins Based on Structural Similarity to Experimentally Validated Zα Domain.

Authors:  Martin Bartas; Kristyna Slychko; Václav Brázda; Jiří Červeň; Christopher A Beaudoin; Tom L Blundell; Petr Pečinka
Journal:  Int J Mol Sci       Date:  2022-01-11       Impact factor: 5.923

  2 in total

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