Literature DB >> 27330743

Multinomial probit Bayesian additive regression trees.

Bereket P Kindo1, Hao Wang2, Edsel A Peña1.   

Abstract

This article proposes multinomial probit Bayesian additive regression trees (MPBART) as a multinomial probit extension of BART - Bayesian additive regression trees. MPBART is flexible to allow inclusion of predictors that describe the observed units as well as the available choice alternatives. Through two simulation studies and four real data examples, we show that MPBART exhibits very good predictive performance in comparison to other discrete choice and multiclass classification methods. To implement MPBART, the R package mpbart is freely available from CRAN repositories.

Entities:  

Keywords:  Bayesian methods; Classification; Machine learning; Statistical computing

Year:  2016        PMID: 27330743      PMCID: PMC4909838          DOI: 10.1002/sta4.110

Source DB:  PubMed          Journal:  Stat (Int Stat Inst)        ISSN: 2049-1573


  4 in total

1.  A comparative study of feature selection and multiclass classification methods for tissue classification based on gene expression.

Authors:  Tao Li; Chengliang Zhang; Mitsunori Ogihara
Journal:  Bioinformatics       Date:  2004-04-15       Impact factor: 6.937

2.  Bayesian ensemble methods for survival prediction in gene expression data.

Authors:  Vinicius Bonato; Veerabhadran Baladandayuthapani; Bradley M Broom; Erik P Sulman; Kenneth D Aldape; Kim-Anh Do
Journal:  Bioinformatics       Date:  2010-12-08       Impact factor: 6.937

3.  Computer-aided diagnosis system: a Bayesian hybrid classification method.

Authors:  F Calle-Alonso; C J Pérez; J P Arias-Nicolás; J Martín
Journal:  Comput Methods Programs Biomed       Date:  2013-08-07       Impact factor: 5.428

4.  Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks.

Authors:  J Khan; J S Wei; M Ringnér; L H Saal; M Ladanyi; F Westermann; F Berthold; M Schwab; C R Antonescu; C Peterson; P S Meltzer
Journal:  Nat Med       Date:  2001-06       Impact factor: 53.440

  4 in total
  1 in total

1.  Bayesian additive regression trees and the General BART model.

Authors:  Yaoyuan Vincent Tan; Jason Roy
Journal:  Stat Med       Date:  2019-08-28       Impact factor: 2.373

  1 in total

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