Literature DB >> 27313041

Translation dynamics of single mRNAs in live cells and neurons.

Bin Wu1, Carolina Eliscovich2, Young J Yoon3, Robert H Singer4.   

Abstract

Translation is the fundamental biological process converting mRNA information into proteins. Single-molecule imaging in live cells has illuminated the dynamics of RNA transcription; however, it is not yet applicable to translation. Here, we report single-molecule imaging of nascent peptides (SINAPS) to assess translation in live cells. The approach provides direct readout of initiation, elongation, and location of translation. We show that mRNAs coding for endoplasmic reticulum (ER) proteins are translated when they encounter the ER membrane. Single-molecule fluorescence recovery after photobleaching provides direct measurement of elongation speed (5 amino acids per second). In primary neurons, mRNAs are translated in proximal dendrites but repressed in distal dendrites and display "bursting" translation. This technology provides a tool with which to address the spatiotemporal translation mechanism of single mRNAs in living cells.
Copyright © 2016, American Association for the Advancement of Science.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27313041      PMCID: PMC4939616          DOI: 10.1126/science.aaf1084

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  38 in total

1.  Dynamic visualization of local protein synthesis in hippocampal neurons.

Authors:  G Aakalu; W B Smith; N Nguyen; C Jiang; E M Schuman
Journal:  Neuron       Date:  2001-05       Impact factor: 17.173

2.  Real-time observation of transcription initiation and elongation on an endogenous yeast gene.

Authors:  Daniel R Larson; Daniel Zenklusen; Bin Wu; Jeffrey A Chao; Robert H Singer
Journal:  Science       Date:  2011-04-22       Impact factor: 47.728

Review 3.  Protein translocation across the eukaryotic endoplasmic reticulum and bacterial plasma membranes.

Authors:  Tom A Rapoport
Journal:  Nature       Date:  2007-11-29       Impact factor: 49.962

4.  Real-time quantification of single RNA translation dynamics in living cells.

Authors:  Tatsuya Morisaki; Kenneth Lyon; Keith F DeLuca; Jennifer G DeLuca; Brian P English; Zhengjian Zhang; Luke D Lavis; Jonathan B Grimm; Sarada Viswanathan; Loren L Looger; Timothee Lionnet; Timothy J Stasevich
Journal:  Science       Date:  2016-05-05       Impact factor: 47.728

Review 5.  In the right place at the right time: visualizing and understanding mRNA localization.

Authors:  Adina R Buxbaum; Gal Haimovich; Robert H Singer
Journal:  Nat Rev Mol Cell Biol       Date:  2014-12-30       Impact factor: 94.444

6.  Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling.

Authors:  Nicholas T Ingolia; Sina Ghaemmaghami; John R S Newman; Jonathan S Weissman
Journal:  Science       Date:  2009-02-12       Impact factor: 47.728

Review 7.  Remote control of gene function by local translation.

Authors:  Hosung Jung; Christos G Gkogkas; Nahum Sonenberg; Christine E Holt
Journal:  Cell       Date:  2014-03-27       Impact factor: 41.582

8.  Robust single-particle tracking in live-cell time-lapse sequences.

Authors:  Khuloud Jaqaman; Dinah Loerke; Marcel Mettlen; Hirotaka Kuwata; Sergio Grinstein; Sandra L Schmid; Gaudenz Danuser
Journal:  Nat Methods       Date:  2008-07-20       Impact factor: 28.547

9.  A protein-tagging system for signal amplification in gene expression and fluorescence imaging.

Authors:  Marvin E Tanenbaum; Luke A Gilbert; Lei S Qi; Jonathan S Weissman; Ronald D Vale
Journal:  Cell       Date:  2014-10-09       Impact factor: 41.582

10.  Fluorescent and photo-oxidizing TimeSTAMP tags track protein fates in light and electron microscopy.

Authors:  Margaret T Butko; Jin Yang; Yang Geng; Hyung Joon Kim; Noo Li Jeon; Xiaokun Shu; Mason R Mackey; Mark H Ellisman; Roger Y Tsien; Michael Z Lin
Journal:  Nat Neurosci       Date:  2012-10-28       Impact factor: 24.884

View more
  158 in total

1.  A multicolor riboswitch-based platform for imaging of RNA in live mammalian cells.

Authors:  Esther Braselmann; Amy E Palmer
Journal:  Methods Enzymol       Date:  2020-04-13       Impact factor: 1.600

Review 2.  Opportunities and challenges for using the zebrafish to study neuronal connectivity as an endpoint of developmental neurotoxicity.

Authors:  Galen W Miller; Vidya Chandrasekaran; Bianca Yaghoobi; Pamela J Lein
Journal:  Neurotoxicology       Date:  2018-04-25       Impact factor: 4.294

Review 3.  Illuminating Genomic Dark Matter with RNA Imaging.

Authors:  Arjun Raj; John L Rinn
Journal:  Cold Spring Harb Perspect Biol       Date:  2019-05-01       Impact factor: 10.005

4.  The key protein of endosomal mRNP transport Rrm4 binds translational landmark sites of cargo mRNAs.

Authors:  Lilli Olgeiser; Carl Haag; Susan Boerner; Jernej Ule; Anke Busch; Janine Koepke; Julian König; Michael Feldbrügge; Kathi Zarnack
Journal:  EMBO Rep       Date:  2018-12-14       Impact factor: 8.807

5.  In vitro labeling strategies for in cellulo fluorescence microscopy of single ribonucleoprotein machines.

Authors:  Thomas C Custer; Nils G Walter
Journal:  Protein Sci       Date:  2017-02-12       Impact factor: 6.725

6.  mRNA structural dynamics shape Argonaute-target interactions.

Authors:  Suzan Ruijtenberg; Stijn Sonneveld; Tao Ju Cui; Ive Logister; Dion de Steenwinkel; Yao Xiao; Ian J MacRae; Chirlmin Joo; Marvin E Tanenbaum
Journal:  Nat Struct Mol Biol       Date:  2020-07-13       Impact factor: 15.369

Review 7.  Local translation in neuronal compartments: how local is local?

Authors:  Vidhya Rangaraju; Susanne Tom Dieck; Erin M Schuman
Journal:  EMBO Rep       Date:  2017-04-12       Impact factor: 8.807

Review 8.  Heterogeneity and specialized functions of translation machinery: from genes to organisms.

Authors:  Naomi R Genuth; Maria Barna
Journal:  Nat Rev Genet       Date:  2018-07       Impact factor: 53.242

Review 9.  The Growing Toolbox for Protein Synthesis Studies.

Authors:  Shintaro Iwasaki; Nicholas T Ingolia
Journal:  Trends Biochem Sci       Date:  2017-05-28       Impact factor: 13.807

10.  Quantifying the dynamics of IRES and cap translation with single-molecule resolution in live cells.

Authors:  Amanda Koch; Luis Aguilera; Tatsuya Morisaki; Brian Munsky; Timothy J Stasevich
Journal:  Nat Struct Mol Biol       Date:  2020-09-21       Impact factor: 15.369

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.