Literature DB >> 25307933

A protein-tagging system for signal amplification in gene expression and fluorescence imaging.

Marvin E Tanenbaum1, Luke A Gilbert2, Lei S Qi3, Jonathan S Weissman2, Ronald D Vale4.   

Abstract

Signals in many biological processes can be amplified by recruiting multiple copies of regulatory proteins to a site of action. Harnessing this principle, we have developed a protein scaffold, a repeating peptide array termed SunTag, which can recruit multiple copies of an antibody-fusion protein. We show that the SunTag can recruit up to 24 copies of GFP, thereby enabling long-term imaging of single protein molecules in living cells. We also use the SunTag to create a potent synthetic transcription factor by recruiting multiple copies of a transcriptional activation domain to a nuclease-deficient CRISPR/Cas9 protein and demonstrate strong activation of endogenous gene expression and re-engineered cell behavior with this system. Thus, the SunTag provides a versatile platform for multimerizing proteins on a target protein scaffold and is likely to have many applications in imaging and controlling biological outputs.
Copyright © 2014 Elsevier Inc. All rights reserved.

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Year:  2014        PMID: 25307933      PMCID: PMC4252608          DOI: 10.1016/j.cell.2014.09.039

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  41 in total

1.  Human single-chain Fv intrabodies counteract in situ huntingtin aggregation in cellular models of Huntington's disease.

Authors:  J M Lecerf; T L Shirley; Q Zhu; A Kazantsev; P Amersdorfer; D E Housman; A Messer; J S Huston
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-10       Impact factor: 11.205

2.  Tethering of human Ago proteins to mRNA mimics the miRNA-mediated repression of protein synthesis.

Authors:  Ramesh S Pillai; Caroline G Artus; Witold Filipowicz
Journal:  RNA       Date:  2004-08-30       Impact factor: 4.942

3.  Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors.

Authors:  Kazutoshi Takahashi; Shinya Yamanaka
Journal:  Cell       Date:  2006-08-10       Impact factor: 41.582

4.  High-affinity binders selected from designed ankyrin repeat protein libraries.

Authors:  H Kaspar Binz; Patrick Amstutz; Andreas Kohl; Michael T Stumpp; Christophe Briand; Patrik Forrer; Markus G Grütter; Andreas Plückthun
Journal:  Nat Biotechnol       Date:  2004-04-18       Impact factor: 54.908

5.  The binding of transcription factor Sp1 to multiple sites is required for maximal expression from the rat transforming growth factor alpha promoter.

Authors:  X Chen; J C Azizkhan; D C Lee
Journal:  Oncogene       Date:  1992-09       Impact factor: 9.867

6.  CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering.

Authors:  Prashant Mali; John Aach; P Benjamin Stranges; Kevin M Esvelt; Mark Moosburner; Sriram Kosuri; Luhan Yang; George M Church
Journal:  Nat Biotechnol       Date:  2013-08-01       Impact factor: 54.908

7.  Direct reprogramming of human fibroblasts toward a cardiomyocyte-like state.

Authors:  Ji-Dong Fu; Nicole R Stone; Lei Liu; C Ian Spencer; Li Qian; Yohei Hayashi; Paul Delgado-Olguin; Sheng Ding; Benoit G Bruneau; Deepak Srivastava
Journal:  Stem Cell Reports       Date:  2013-08-22       Impact factor: 7.765

8.  Single molecule imaging reveals differences in microtubule track selection between Kinesin motors.

Authors:  Dawen Cai; Dyke P McEwen; Jeffery R Martens; Edgar Meyhofer; Kristen J Verhey
Journal:  PLoS Biol       Date:  2009-10-13       Impact factor: 8.029

9.  Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system.

Authors:  Baohui Chen; Luke A Gilbert; Beth A Cimini; Joerg Schnitzbauer; Wei Zhang; Gene-Wei Li; Jason Park; Elizabeth H Blackburn; Jonathan S Weissman; Lei S Qi; Bo Huang
Journal:  Cell       Date:  2013-12-19       Impact factor: 41.582

10.  Multiplexed activation of endogenous genes by CRISPR-on, an RNA-guided transcriptional activator system.

Authors:  Albert W Cheng; Haoyi Wang; Hui Yang; Linyu Shi; Yarden Katz; Thorold W Theunissen; Sudharshan Rangarajan; Chikdu S Shivalila; Daniel B Dadon; Rudolf Jaenisch
Journal:  Cell Res       Date:  2013-08-27       Impact factor: 25.617

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  447 in total

Review 1.  The New State of the Art: Cas9 for Gene Activation and Repression.

Authors:  Marie F La Russa; Lei S Qi
Journal:  Mol Cell Biol       Date:  2015-09-14       Impact factor: 4.272

2.  Synthetic CRISPR RNA-Cas9-guided genome editing in human cells.

Authors:  Meghdad Rahdar; Moira A McMahon; Thazha P Prakash; Eric E Swayze; C Frank Bennett; Don W Cleveland
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-16       Impact factor: 11.205

Review 3.  Combining CRISPR/Cas9 and rAAV Templates for Efficient Gene Editing.

Authors:  Manuel Kaulich; Steven F Dowdy
Journal:  Nucleic Acid Ther       Date:  2015-11-05       Impact factor: 5.486

4.  In Vivo Transcriptional Activation Using CRISPR/Cas9 in Drosophila.

Authors:  Shuailiang Lin; Ben Ewen-Campen; Xiaochun Ni; Benjamin E Housden; Norbert Perrimon
Journal:  Genetics       Date:  2015-08-05       Impact factor: 4.562

5.  Target selection by natural and redesigned PUF proteins.

Authors:  Douglas F Porter; Yvonne Y Koh; Brett VanVeller; Ronald T Raines; Marvin Wickens
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-14       Impact factor: 11.205

6.  CASFISH: CRISPR/Cas9-mediated in situ labeling of genomic loci in fixed cells.

Authors:  Wulan Deng; Xinghua Shi; Robert Tjian; Timothée Lionnet; Robert H Singer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-31       Impact factor: 11.205

Review 7.  Cancer induction and suppression with transcriptional control and epigenome editing technologies.

Authors:  Shota Nakade; Takashi Yamamoto; Tetsushi Sakuma
Journal:  J Hum Genet       Date:  2017-11-14       Impact factor: 3.172

8.  LlamaTags: A Versatile Tool to Image Transcription Factor Dynamics in Live Embryos.

Authors:  Jacques P Bothma; Matthew R Norstad; Simon Alamos; Hernan G Garcia
Journal:  Cell       Date:  2018-05-10       Impact factor: 41.582

9.  Reversible Disruption of Specific Transcription Factor-DNA Interactions Using CRISPR/Cas9.

Authors:  S Ali Shariati; Antonia Dominguez; Shicong Xie; Marius Wernig; Lei S Qi; Jan M Skotheim
Journal:  Mol Cell       Date:  2019-05-02       Impact factor: 17.970

Review 10.  The Growing Toolbox for Protein Synthesis Studies.

Authors:  Shintaro Iwasaki; Nicholas T Ingolia
Journal:  Trends Biochem Sci       Date:  2017-05-28       Impact factor: 13.807

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