Literature DB >> 27265362

Determinants of genetic diversity.

Hans Ellegren1, Nicolas Galtier2.   

Abstract

Genetic polymorphism varies among species and within genomes, and has important implications for the evolution and conservation of species. The determinants of this variation have been poorly understood, but population genomic data from a wide range of organisms now make it possible to delineate the underlying evolutionary processes, notably how variation in the effective population size (Ne) governs genetic diversity. Comparative population genomics is on its way to providing a solution to 'Lewontin's paradox' - the discrepancy between the many orders of magnitude of variation in population size and the much narrower distribution of diversity levels. It seems that linked selection plays an important part both in the overall genetic diversity of a species and in the variation in diversity within the genome. Genetic diversity also seems to be predictable from the life history of a species.

Mesh:

Year:  2016        PMID: 27265362     DOI: 10.1038/nrg.2016.58

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  156 in total

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Journal:  Science       Date:  2006-04-28       Impact factor: 47.728

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Authors:  I Schaefer; K Domes; M Heethoff; K Schneider; I Schön; R A Norton; S Scheu; M Maraun
Journal:  J Evol Biol       Date:  2006-01       Impact factor: 2.411

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Journal:  Trends Ecol Evol       Date:  1996-10       Impact factor: 17.712

4.  Evolution of the mutation rate.

Authors:  Michael Lynch
Journal:  Trends Genet       Date:  2010-06-30       Impact factor: 11.639

5.  The hitch-hiking effect of a favourable gene.

Authors:  J M Smith; J Haigh
Journal:  Genet Res       Date:  1974-02       Impact factor: 1.588

6.  Background selection and patterns of genetic diversity in Drosophila melanogaster.

Authors:  B Charlesworth
Journal:  Genet Res       Date:  1996-10       Impact factor: 1.588

7.  Inference of human population history from individual whole-genome sequences.

Authors:  Heng Li; Richard Durbin
Journal:  Nature       Date:  2011-07-13       Impact factor: 49.962

8.  Evolutionary analysis of the female-specific avian W chromosome.

Authors:  Linnéa Smeds; Vera Warmuth; Paulina Bolivar; Severin Uebbing; Reto Burri; Alexander Suh; Alexander Nater; Stanislav Bureš; Laszlo Z Garamszegi; Silje Hogner; Juan Moreno; Anna Qvarnström; Milan Ružić; Stein-Are Sæther; Glenn-Peter Sætre; Janos Török; Hans Ellegren
Journal:  Nat Commun       Date:  2015-06-04       Impact factor: 14.919

9.  Sex speeds adaptation by altering the dynamics of molecular evolution.

Authors:  Michael J McDonald; Daniel P Rice; Michael M Desai
Journal:  Nature       Date:  2016-02-24       Impact factor: 49.962

10.  Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers.

Authors:  Reto Burri; Alexander Nater; Takeshi Kawakami; Carina F Mugal; Pall I Olason; Linnea Smeds; Alexander Suh; Ludovic Dutoit; Stanislav Bureš; Laszlo Z Garamszegi; Silje Hogner; Juan Moreno; Anna Qvarnström; Milan Ružić; Stein-Are Sæther; Glenn-Peter Sætre; Janos Török; Hans Ellegren
Journal:  Genome Res       Date:  2015-09-09       Impact factor: 9.043

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  120 in total

1.  Genetic diversity is largely unpredictable but scales with museum occurrences in a species-rich clade of Australian lizards.

Authors:  Sonal Singhal; Huateng Huang; Pascal O Title; Stephen C Donnellan; Iris Holmes; Daniel L Rabosky
Journal:  Proc Biol Sci       Date:  2017-05-17       Impact factor: 5.349

2.  Dynamics of genome size evolution in birds and mammals.

Authors:  Aurélie Kapusta; Alexander Suh; Cédric Feschotte
Journal:  Proc Natl Acad Sci U S A       Date:  2017-02-08       Impact factor: 11.205

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Journal:  Proc Biol Sci       Date:  2018-08-15       Impact factor: 5.349

4.  How Much Does Ne Vary Among Species?

Authors:  Nicolas Galtier; Marjolaine Rousselle
Journal:  Genetics       Date:  2020-08-24       Impact factor: 4.562

5.  Determinants of genetic variation across eco-evolutionary scales in pinnipeds.

Authors:  Claire R Peart; Sergio Tusso; Saurabh D Pophaly; Fidel Botero-Castro; Chi-Chih Wu; David Aurioles-Gamboa; Amy B Baird; John W Bickham; Jaume Forcada; Filippo Galimberti; Neil J Gemmell; Joseph I Hoffman; Kit M Kovacs; Mervi Kunnasranta; Christian Lydersen; Tommi Nyman; Larissa Rosa de Oliveira; Anthony J Orr; Simona Sanvito; Mia Valtonen; Aaron B A Shafer; Jochen B W Wolf
Journal:  Nat Ecol Evol       Date:  2020-06-08       Impact factor: 15.460

Review 6.  Oaks: an evolutionary success story.

Authors:  Antoine Kremer; Andrew L Hipp
Journal:  New Phytol       Date:  2019-12-02       Impact factor: 10.151

7.  Low population genetic differentiation in two Tamarix species (Tamarix austromongolica and Tamarix chinensis) along the Yellow River.

Authors:  Hongyan Liang; Canran Liu; Yong Li; Yingchun Wang; Yuhua Kong; Jine Quan; Xitian Yang
Journal:  Genetica       Date:  2018-11-20       Impact factor: 1.082

8.  Development of SNP Panels as a New Tool to Assess the Genetic Diversity, Population Structure, and Parentage Analysis of the Eastern Oyster (Crassostrea virginica).

Authors:  Wilawan Thongda; Honggang Zhao; Dongdong Zhang; Lauren N Jescovitch; Ming Liu; Ximing Guo; Meagan Schrandt; Sean P Powers; Eric Peatman
Journal:  Mar Biotechnol (NY)       Date:  2018-03-13       Impact factor: 3.619

9.  Effects of contemporary shifts of range margins on patterns of genetic structure and mating system in two coastal plant species.

Authors:  Mathilde Latron; Jean-François Arnaud; Héloïse Ferla; Cécile Godé; Anne Duputié
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10.  Drivers and dynamics of a massive adaptive radiation in cichlid fishes.

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Journal:  Nature       Date:  2020-11-18       Impact factor: 49.962

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