Literature DB >> 33835457

Database Resources for Functional Circular RNAs.

Dahui Hu1, Peijing Zhang1, Ming Chen2.   

Abstract

Circular RNA (or circRNA) is a type of single-stranded covalently closed circular RNA molecule and play important roles in diverse biological pathways. A comprehensive functionally annotated circRNA database will help to understand the circRNAs and their functions. CircFunBase is such a web-accessible database that aims to provide a high-quality functional circRNA resource including experimentally validated and computationally predicted functions. CircFunBase provides visualized circRNA-miRNA interaction networks. In addition, a genome browser is provided to visualize the genome context of circRNA. In this chapter, we illustrate examples of searching for circRNA and getting detailed information of circRNA. Moreover, other circRNA related databases are outlined.

Keywords:  CircFunBase; CircRNA; CircRNA function; CircRNA interaction; Database

Year:  2021        PMID: 33835457     DOI: 10.1007/978-1-0716-1307-8_24

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  2 in total

1.  Comprehensive characterization of tissue-specific circular RNAs in the human and mouse genomes.

Authors:  Siyu Xia; Jing Feng; Lijun Lei; Jun Hu; Linjian Xia; Jun Wang; Yu Xiang; Lingjun Liu; Shan Zhong; Leng Han; Chunjiang He
Journal:  Brief Bioinform       Date:  2017-11-01       Impact factor: 11.622

Review 2.  Circular RNA: an emerging key player in RNA world.

Authors:  Xianwen Meng; Xue Li; Peijing Zhang; Jingjing Wang; Yincong Zhou; Ming Chen
Journal:  Brief Bioinform       Date:  2017-07-01       Impact factor: 11.622

  2 in total
  1 in total

Review 1.  Regulation of Non-Coding RNA in the Growth and Development of Skeletal Muscle in Domestic Chickens.

Authors:  Hongmei Shi; Yang He; Xuzhen Li; Yanli Du; Jinbo Zhao; Changrong Ge
Journal:  Genes (Basel)       Date:  2022-06-09       Impact factor: 4.141

  1 in total

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