| Literature DB >> 27230071 |
Radboud J Duintjer Tebbens1, Lee M Hampton2, Kimberly M Thompson3.
Abstract
BACKGROUND: The endgame for polio eradication involves coordinated global cessation of oral poliovirus vaccine (OPV) with cessation of serotype 2 OPV (OPV2 cessation) implemented in late April and early May 2016 and cessation of serotypes 1 and 3 OPV (OPV13 cessation) currently planned for after 2018. The logistics associated with globally switching all use of trivalent OPV (tOPV) to bivalent OPV (bOPV) represent a significant undertaking, which may cause some complications, including delays that lead to different timing of the switch across shared borders.Entities:
Keywords: Dynamic modeling; Eradication; Oral poliovirus vaccine; Polio; Risk management; Vaccine-derived poliovirus
Mesh:
Substances:
Year: 2016 PMID: 27230071 PMCID: PMC4880825 DOI: 10.1186/s12879-016-1536-9
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Setting-specific model inputs for Analyses II and III, adapted from the global model [4] and adopting all other global model assumptions, including generic inputs from the DEB model.[16, 17]
| Region | R0 | α | pd | κ | tr | POL3 | TC | Prm | poro | # tOPV SIAs in 2015 | Year of IPV introduction | Hypothetical switch date |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Analysis II: | ||||||||||||
| Hypothetical population | 10 or 13 | 0 | NA | 0.35 | 0.6 | 0.3 | 0.8 | 0.7 | 0.3 | 2 | 2015 | Variable after last SIA in 2015 |
| Analysis III: | ||||||||||||
| Population like northern India | 13 | 0.2 | 180 | 0.35 | 0.6 | 0.3 | 2 | 2015 | ||||
| - Pop. A, subpop. 0 (under-vacc.) | 0.3 | 0.8 | 0.7 | Mid-2015 | ||||||||
| - Pop. A, subpop. 1 (general) | 0.6 | 0.95 | 0.5 | Mid-2015 | ||||||||
| - Pop. B, subpop. 0 (under-vacc.) | 0.3 | 0.8 | 0.7 | April 1, 2016 | ||||||||
| - Pop. B, subpop 1 (general) | 0.6 | 0.95 | 0.5 | April 1, 2016 | ||||||||
| Population like northern Pakistan/Afghanistan | 11 | 0.2 | 180 | 0.35 | 0.65 | 0.3 | 2015 | |||||
| - Pop. A, subpop. 0 (general) | 0.6 | 0.8 | 0.7 | 2 | Mid-2015 | |||||||
| - Pop. A, subpop. 1 (general) | 0.6 | 0.8 | 0.7 | 2 | Mid-2015 | |||||||
| - Pop. B, subpop. 0 (under-vacc.) | 0.1 | 0.35 | 0.95 | 3 | April 1, 2016 | |||||||
| - Pop. B, subpop 1 (general) | 0.6 | 0.8 | 0.7 | 2 | April 1, 2016 | |||||||
| Population like Ukraine | 6 | 0.4 | 180 | 0.45 | 0.74 | 0.8 | 0 | 2005 | ||||
| - Pop. A, subpop. 0 (general) | 0.7a | 0.8 | 0.7 | Mid-2015 | ||||||||
| - Pop. A, subpop. 1 (general) | 0.7a | 0.8 | 0.7 | Mid-2015 | ||||||||
| - Pop. B, subpop. 0 (under-vacc.) | 0.3 a | 0.8 | 0.7 | April 1, 2016 | ||||||||
| - Pop. B, subpop 1 (under-vacc. ) | 0.3a | 0.8 | 0.7 | April 1, 2016 |
Model input symbols: [3, 16] R average annual basic reproduction number for WPV of serotype 1, α seasonal amplitude of R0, defined as the “proportional change in R0 due to seasonality” [16, p. 717], pd peak day of R0, κ strength of preferential mixing between age groups, defined as the “proportion of contacts reserved for individuals within the same mixing age group”[16, p. 717], tr take rate of serotype 2 tOPV, POL3 RI coverage with 3 or more non-birth doses, TC true coverage of each SIA, P repeated missed probability of each SIA, poro, proportion of transmissions via oropharyngeal route
aAssume POL3 = 90 % prior to 2010
Fig. 1Analysis I results showing selected percentiles from the distribution of net reproduction numbers (Rn values) for the 520 subpopulations in the global model [4] that used OPV-only as of 2013 with base case assumptions including tOPV intensification before the tOPV to bOPV switch in April 2016. a Rn values for OPV2 (stage 0). b Rn values for stage 10 OPV2-related virus. c Rn values for VDPV2 (stage 19)
Fig. 2Analysis I results showing selected percentiles from the distribution of net reproduction numbers (Rn values) for the 520 subpopulations in the global model [4] that used OPV-only as of 2013 assuming no tOPV intensification before the tOPV to bOPV switch in April 2016. a Rn values for OPV2 (stage 0). b Rn values for stage 10 OPV2-related virus. c Rn values for VDPV2 (stage 19)
Relationship between the time after the switch until the net reproduction number (Rn) of OPV2 (stage 0) virus exceeds 1, the Rn of OPV2 (stage 0) virus at the time of the switch, and population-specific properties based on the populations from the global model [4] represented in the distributions of Fig. 1 (analysis I base case with tOPV intensification)
| Time (years) since switch until Rn of OPV2 > 1 | # subpopulations in time range (out of 520 with OPV-only) | Properties of subpopulations in range | ||||||
|---|---|---|---|---|---|---|---|---|
| Average Rn before switcha | R0 b | poro | tr | POL3 | # tOPV SIA during intensification (2015–2016) | TC | ||
| 1.5–1.74 | 16 | 0.37–0.44 | 11–13 | 0.3 | 0.6–0.7 | 0.3 | 6 | 0.5 |
| 0.6 | 6 | 0.8 | ||||||
| 0.9 | 2 | 0.8 | ||||||
| 1.75–1.99 | 65 | 0.36–0.51 | 10–13 | 0.3 | 0.6–0.7 | 0.1 | 7 | 0.35 |
| 0.3 | 6 | 0.8 | ||||||
| 0.6 | 4 | 0.5 | ||||||
| 0.6 | 6 | 0.8 | ||||||
| 0.98 | 2 | 0.95 | ||||||
| 2–2.24 | 100 | 0.36–0.42 | 8 | 0.3 | 0.7 | 0.05 | 7 | 0.15 |
| 10–11 | 0.3 | 0.65–0.7 | 0.3 | 6 | 0.8 | |||
| 0.6 | 4 | 0.5–0.8 | ||||||
| 0.6 | 6 | 0.5 | ||||||
| 0.9 | 2 | 0.8–0.95 | ||||||
| 2.25–2.49 | 20 | 0.37 | 10 | 0.3 | 0.7 | 0.6 | 4 | 0.95 |
| 0.9 | 2 | 0.95 | ||||||
| 2.5–2.74 | 20 | 0.33–0.35 | 9 | 0.3 | 0.65–0.7 | 0.6 | 4 | 0.8 |
| 0.9 | 2 | 0.8 | ||||||
| 0.98 | 0 | 0.95 | ||||||
| 2.75–3 | 30 | 0.25–0.36 | 7–9 | 0.3 | 0.7 | 0.3 | 6 | 0.5 |
| 0.6 | 4 | 0.8 | ||||||
| 0.9 | 2 | 0.8 | ||||||
| 0.8 | 0.65 | 0.6 | 4 | 0.95 | ||||
| 3–3.99 | 58 | 0.25–0.36 | 7–8 | 0.3 | 0.7–0.72 | 0.3 | 6 | 0.8 |
| 0.6 | 4 | 0.5–0.8 | ||||||
| 0.9 | 2 | 0.8 | ||||||
| 0.98 | 0 | 0.95 | ||||||
| 0.5 | 0.72 | 0.6 | 4 | 0.8 | ||||
| 0.8 | 0.65 | 0.9 | 2 | 0.95 | ||||
| 0.98 | 0 | 0.95 | ||||||
| 4–4.99 | 2 | 0.29 | 7 | 0.5 | 0.72–0.73 | 0.6 | 4 | 0.8 |
| 0.9 | 2 | 0.8 | ||||||
| 5–7.49 | 30 | 0.27–0.35 | 6–8 | 0.5–0.6 | 0.73 | 0.6 | 4 | 0.8 |
| 0.9 | 2 | 0.8–0.95 | ||||||
| 7.5–9.99 | 3 | 0.30 | 7 | 0.6 | 0.73 | 0.6 | 4 | 0.8 |
| 10–14.99 | 16 | 0.31–0.36 | 7–8 | 0.6 | 0.73–0.74 | 0.6 | 4 | 0.8 |
| 0.9 | 2 | 0.8–95 | ||||||
| 0.98 | 0 | 0.95 | ||||||
| 15–19.99 | 116 | 0.3–0.37 | 7–8 | 0.6 | 0.73–0.74 | 0.9 | 2 | 0.8 |
| 0.98 | 0 | 0.95 | ||||||
| >20 | 44 | 0.3–0.35 | 6–7 | 0.6–0.8 | 0.73–0.75 | 0.9 | 2 | 0.95 |
| 0.98 | 0 | 0.95 | ||||||
Model input symbols: [3, 16] R average annual basic reproduction number for WPV of serotype 1, tr take rate of serotype 2 tOPV, POL3 RI coverage with 3 or more non-birth doses, TC true coverage of each SIA, p proportion of transmissions via oropharyngeal route
aDefined as the average Rn of OPV2 over the one-year period preceding the switch
bThe global model uses R0 for WPV1 to characterize variability in subpopulations, R0 for serotype 2 WPV equals 0.9 times the values shown in this column
Relationship between the time after the switch until the net reproduction number (Rn) of OPV2 (stage 0) virus exceeds 1, the Rn of OPV2 (stage 0) virus at the time of the switch, and population-specific properties based on the populations from the global model [4] represented in the distributions of Fig. 2 (analysis I without tOPV intensification)
| Time (years) since switch until Rn of OPV2 > 1 | # subpopulations in time range (out of 520 with OPV-only) | Properties of subpopulations in range | ||||||
|---|---|---|---|---|---|---|---|---|
| Average Rn before switcha | R0 b | poro | tr | POL3 | # tOPV SIA during 2015–2016 | TC | ||
| 1.0–1.45 | 40 | 0.41–0.49 | 12–13 | 0.3 | 0.6 | 0.3 | 4 | 0.35 |
| 0.6 | 4 | 0.8 | ||||||
| 0.6 | 4 | 0.95 | ||||||
| 0.9 | 2 | 0.8 | ||||||
| 0.98 | 2 | 0.95 | ||||||
| 1.5–1.74 | 10 | 0.37–0.44 | 11 | 0.3 | 0.7 | 0.3 | 4 | 0.5 |
| 0.6 | 4 | 0.8 | ||||||
| 0.9 | 2 | 0.8 | ||||||
| 0.98 | 2 | 0.95 | ||||||
| 1.75–1.99 | 30 | 0.55 | 8 | 0.3 | 0.7 | 0.05 | 4 | 0.15 |
| 0.35 | 9 | 0.3 | 0.7 | 0.6 | 2 | 0.8 | ||
| 0.35–0.43 | 9–12 | 0.3 | 0.65–0.7 | 0.3 | 4 | 0.5 | ||
| 0.6 | 4 | 0.5–0.95 | ||||||
| 0.9 | 2 | 0.8–0.95 | ||||||
| 2–2.24 | 103 | 0.36–0.41 | 10–11 | 0.3 | 0.65–0.7 | 0.3 | 4 | 0.8 |
| 0.6 | 4 | 0.8–0.95 | ||||||
| 0.9 | 2 | 0.8–0.95 | ||||||
| 0.98 | 0 | 0.8 | ||||||
| 2.25–2.49 | 10 | 0.37 | 10 | 0.3 | 0.7 | 0.9 | 2 | 0.95 |
| 2.5–2.74 | 18 | 0.33–0.38 | 9 | 0.3 | 0.65–0.7 | 0.9 | 2 | 0.8 |
| 0.98 | 0 | 0.95 | ||||||
| 2.75–3 | 31 | 0.26–0.37 | 7–9 | 0.3 | 0.7–0.72 | 0.3 | 4 | 0.5 |
| 0.6 | 2 | 0.8 | ||||||
| 0.9 | 2 | 0.8 | ||||||
| 0.98 | 0 | 0.8 | ||||||
| 0.8 | 0.65 | 0.6 | 2 | 0.95 | ||||
| 3–3.99 | 67 | 0.25–0.39 | 7–8 | 0.3 | 0.7–0.72 | 0.3 | 4 | 0.8 |
| 0.6 | 2 | 0.5–0.8 | ||||||
| 0.9 | 2 | 0.8 | ||||||
| 0.98 | 0 | 0.95 | ||||||
| 0.5 | 0.72 | 0.6 | 2 | 0.8 | ||||
| 0.8 | 0.9 | 2 | 0.95 | |||||
| 0.98 | 0 | 0.95 | ||||||
| 0.38c | 11 | 0.3 | 0.65 | 0.6 | 4 | 0.8 | ||
| 0.53c | 11 | 0.3 | 0.65 | 0.1 | 4 | 0.35 | ||
| 4–4.99 | 2 | 0.29 | 7 | 0.5 | 0.72–0.73 | 0.6 | 2 | 0.8 |
| 0.9 | 2 | 0.8 | ||||||
| 5–7.49 | 30 | 0.27–0.35 | 6–8 | 0.5–0.6 | 0.73 | 0.6 | 2 | 0.8 |
| 0.9 | 2 | 0.8–0.95 | ||||||
| 7.5–9.99 | 3 | 0.30 | 7 | 0.6 | 0.73 | 0.6 | 2 | 0.8 |
| 10–14.99 | 16 | 0.31–0.36 | 7–8 | 0.6 | 0.73–0.74 | 0.6 | 2 | 0.8 |
| 0.9 | 2 | 0.8–95 | ||||||
| 0.98 | 0 | 0.95 | ||||||
| 15–19.99 | 116 | 0.3–0.37 | 7–8 | 0.6 | 0.73–0.74 | 0.9 | 2 | 0.8 |
| 0.98 | 0 | 0.95 | ||||||
| >20 | 44 | 0.3–0.35 | 6–7 | 0.6–0.8 | 0.73–0.75 | 0.9 | 2 | 0.95 |
| 0.98 | 0 | 0.95 | ||||||
Model input symbols: [3, 16] R average annual basic reproduction number for WPV of serotype 1, tr take rate of serotype 2 tOPV, POL3 RI coverage with 3 or more non-birth doses, TC true coverage of each SIA, p proportion of transmissions via oropharyngeal route
aDefined as the average Rn of OPV2 over the one-year period preceding the switch
bThe global model uses R0 for WPV1 to characterize variability in subpopulations, R0 for serotype 2 WPV equals 0.9 times the values shown in this column
cPopulation shows long time until Rn of OPV2 exceeds one because of an indigenous cVDPV2 outbreak in one of its subpopulations following the switch and a subsequent mOPV2 response
Fig. 3Analysis II results showing the relationship between net reproduction number (Rn) at the time of the switch and time until OPV2-related viruses in different reversion stages can establish circulation (i.e., time until Rn becomes greater than 1) in a hypothetical population (see Table 1) The shaded areas show the duration of indigenous circulation of OPV2-related viruses following the switch, which continues indefinitely if cVDPV2s emerge indigenously in the absence of an outbreak response. a Baseline R0 for WPV1 equals 13. b Baseline R0 for WPV1 equals 10
Fig. 4Analysis III results showing examples of non-synchronous switch dynamics in various realistic settings in a two-population, four-subpopulation model. a Setting like northern India. b Setting like northern Pakistan and Afghanistan. c Setting like Ukraine, assuming IPV use since 2005. d Setting like Ukraine, assuming no IPV use until 2017