Literature DB >> 27217978

Degradation elements coincide with cofactor binding sites in a short-lived transcription factor.

Christopher M Hickey1.   

Abstract

Elaborate control of gene expression by transcription factors is common to all kingdoms of life. In eukaryotes, transcription factor abundance and activity are often regulated by targeted proteolysis via the ubiquitin-proteasome system (UPS). The yeast MATα2 (α2) cell type regulator has long served as a model for UPS-dependent transcription factor degradation. Proteolysis of α2 is complex: it involves at least 2 ubiquitylation pathways and multiple regions of α2 affect its degradation. Such complexity also exists for the degradation of other UPS substrates. Here I review α2 degradation, most notably our recent identification of 2 novel degradation elements within α2 that overlap corepressor binding sites. I discuss possible implications of these findings and consider how principles of α2 proteolysis may be relevant to the degradation of other UPS substrates.

Entities:  

Keywords:  MATα2 (α2); corepressor; nucleus; proteasome; proteolysis; transcription; ubiquitin

Year:  2016        PMID: 27217978      PMCID: PMC4861582          DOI: 10.1080/21592799.2016.1157664

Source DB:  PubMed          Journal:  Cell Logist        ISSN: 2159-2780


  43 in total

1.  SUMO-independent in vivo activity of a SUMO-targeted ubiquitin ligase toward a short-lived transcription factor.

Authors:  Yang Xie; Eric M Rubenstein; Tanja Matt; Mark Hochstrasser
Journal:  Genes Dev       Date:  2010-04-13       Impact factor: 11.361

Review 2.  Transcriptional repression by Tup1-Ssn6.

Authors:  Tania M Malavé; Sharon Y R Dent
Journal:  Biochem Cell Biol       Date:  2006-08       Impact factor: 3.626

3.  High-throughput analysis of in vivo protein stability.

Authors:  Ikjin Kim; Christina R Miller; David L Young; Stanley Fields
Journal:  Mol Cell Proteomics       Date:  2013-07-29       Impact factor: 5.911

Review 4.  The spatial and temporal organization of ubiquitin networks.

Authors:  Caroline Grabbe; Koraljka Husnjak; Ivan Dikic
Journal:  Nat Rev Mol Cell Biol       Date:  2011-03-30       Impact factor: 94.444

5.  In vivo degradation of a transcriptional regulator: the yeast alpha 2 repressor.

Authors:  M Hochstrasser; A Varshavsky
Journal:  Cell       Date:  1990-05-18       Impact factor: 41.582

6.  Spatially regulated ubiquitin ligation by an ER/nuclear membrane ligase.

Authors:  Min Deng; Mark Hochstrasser
Journal:  Nature       Date:  2006-10-19       Impact factor: 49.962

7.  Distinct machinery is required in Saccharomyces cerevisiae for the endoplasmic reticulum-associated degradation of a multispanning membrane protein and a soluble luminal protein.

Authors:  Gregory Huyer; Wachirapon F Piluek; Zoya Fansler; Stefan G Kreft; Mark Hochstrasser; Jeffrey L Brodsky; Susan Michaelis
Journal:  J Biol Chem       Date:  2004-07-12       Impact factor: 5.157

8.  Degradation signal masking by heterodimerization of MATalpha2 and MATa1 blocks their mutual destruction by the ubiquitin-proteasome pathway.

Authors:  P R Johnson; R Swanson; L Rakhilina; M Hochstrasser
Journal:  Cell       Date:  1998-07-24       Impact factor: 41.582

Review 9.  Function and regulation of SUMO proteases.

Authors:  Christopher M Hickey; Nicole R Wilson; Mark Hochstrasser
Journal:  Nat Rev Mol Cell Biol       Date:  2012-12       Impact factor: 94.444

10.  Exposed hydrophobicity is a key determinant of nuclear quality control degradation.

Authors:  Eric K Fredrickson; Joel C Rosenbaum; Melissa N Locke; Thomas I Milac; Richard G Gardner
Journal:  Mol Biol Cell       Date:  2011-05-05       Impact factor: 4.138

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  6 in total

1.  Degron masking outlines degronons, co-degrading functional modules in the proteome.

Authors:  Mainak Guharoy; Tamas Lazar; Mauricio Macossay-Castillo; Peter Tompa
Journal:  Commun Biol       Date:  2022-05-11

2.  Acetylation of N-terminus and two internal amino acids is dispensable for degradation of a protein that aberrantly engages the endoplasmic reticulum translocon.

Authors:  Sarah M Engle; Justin J Crowder; Sheldon G Watts; Christopher J Indovina; Samuel Z Coffey; Eric M Rubenstein
Journal:  PeerJ       Date:  2017-08-22       Impact factor: 2.984

3.  The degradation-promoting roles of deubiquitinases Ubp6 and Ubp3 in cytosolic and ER protein quality control.

Authors:  Hongyi Wu; Davis T W Ng; Ian Cheong; Paul Matsudaira
Journal:  PLoS One       Date:  2020-05-13       Impact factor: 3.240

4.  DNA binding by the MATα2 transcription factor controls its access to alternative ubiquitin-modification pathways.

Authors:  Christopher M Hickey; Yang Xie; Mark Hochstrasser
Journal:  Mol Biol Cell       Date:  2018-01-03       Impact factor: 4.138

5.  Protein quality control degron-containing substrates are differentially targeted in the cytoplasm and nucleus by ubiquitin ligases.

Authors:  Christopher M Hickey; Carolyn Breckel; Mengwen Zhang; William C Theune; Mark Hochstrasser
Journal:  Genetics       Date:  2021-03-03       Impact factor: 4.562

Review 6.  Ubiquitin Ligase Redundancy and Nuclear-Cytoplasmic Localization in Yeast Protein Quality Control.

Authors:  Carolyn Allain Breckel; Mark Hochstrasser
Journal:  Biomolecules       Date:  2021-12-03
  6 in total

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