Literature DB >> 27203750

Link-Prediction Enhanced Consensus Clustering for Complex Networks.

Matthew Burgess1, Eytan Adar1,2, Michael Cafarella1.   

Abstract

Many real networks that are collected or inferred from data are incomplete due to missing edges. Missing edges can be inherent to the dataset (Facebook friend links will never be complete) or the result of sampling (one may only have access to a portion of the data). The consequence is that downstream analyses that "consume" the network will often yield less accurate results than if the edges were complete. Community detection algorithms, in particular, often suffer when critical intra-community edges are missing. We propose a novel consensus clustering algorithm to enhance community detection on incomplete networks. Our framework utilizes existing community detection algorithms that process networks imputed by our link prediction based sampling algorithm and merges their multiple partitions into a final consensus output. On average our method boosts performance of existing algorithms by 7% on artificial data and 17% on ego networks collected from Facebook.

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Mesh:

Year:  2016        PMID: 27203750      PMCID: PMC4874693          DOI: 10.1371/journal.pone.0153384

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  23 in total

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5.  Robustness of community structure in networks.

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7.  Consensus clustering in complex networks.

Authors:  Andrea Lancichinetti; Santo Fortunato
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9.  Exploring the limits of community detection strategies in complex networks.

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Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

10.  Where have all the interactions gone? Estimating the coverage of two-hybrid protein interaction maps.

Authors:  Hailiang Huang; Bruno M Jedynak; Joel S Bader
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  3 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  2020-09-04       Impact factor: 11.205

2.  Link prediction based on non-negative matrix factorization.

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Journal:  PLoS One       Date:  2017-08-30       Impact factor: 3.240

3.  Deconvoluting simulated metagenomes: the performance of hard- and soft- clustering algorithms applied to metagenomic chromosome conformation capture (3C).

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