Literature DB >> 27190176

Enhanced Genetic Characterization of Influenza A(H3N2) Viruses and Vaccine Effectiveness by Genetic Group, 2014-2015.

Brendan Flannery1, Richard K Zimmerman2, Larisa V Gubareva1, Rebecca J Garten1, Jessie R Chung3, Mary Patricia Nowalk2, Michael L Jackson4, Lisa A Jackson4, Arnold S Monto5, Suzanne E Ohmit5, Edward A Belongia6, Huong Q McLean6, Manjusha Gaglani7, Pedro A Piedra8, Vasiliy P Mishin1, Anton P Chesnokov1, Sarah Spencer3, Swathi N Thaker1, John R Barnes1, Angie Foust1, Wendy Sessions1, Xiyan Xu1, Jacqueline Katz1, Alicia M Fry1.   

Abstract

BACKGROUND: During the 2014-2015 US influenza season, expanded genetic characterization of circulating influenza A(H3N2) viruses was used to assess the impact of the genetic variability of influenza A(H3N2) viruses on influenza vaccine effectiveness (VE).
METHODS: A novel pyrosequencing assay was used to determine genetic group, based on hemagglutinin (HA) gene sequences, of influenza A(H3N2) viruses from patients enrolled at US Influenza Vaccine Effectiveness Network sites. VE was estimated using a test-negative design comparing vaccination among patients infected with influenza A(H3N2) viruses and uninfected patients.
RESULTS: Among 9710 enrollees, 1868 (19%) tested positive for influenza A(H3N2) virus; genetic characterization of 1397 viruses showed that 1134 (81%) belonged to 1 HA genetic group (3C.2a) of antigenically drifted influenza A(H3N2) viruses. Effectiveness of 2014-2015 influenza vaccination varied by influenza A(H3N2) virus genetic group from 1% (95% confidence interval [CI], -14% to 14%) against illness caused by antigenically drifted influenza A(H3N2) virus group 3C.2a viruses versus 44% (95% CI, 16%-63%) against illness caused by vaccine-like influenza A(H3N2) virus group 3C.3b viruses.
CONCLUSIONS: Effectiveness of 2014-2015 influenza vaccination varied by genetic group of influenza A(H3N2) virus. Changes in HA genes related to antigenic drift were associated with reduced VE. Published by Oxford University Press for the Infectious Diseases Society of America 2016. This work is written by (a) US Government employee(s) and is in the public domain in the US.

Entities:  

Keywords:  genetic characterization; influenza; influenza vaccine; pyrosequencing; vaccine effectiveness

Mesh:

Substances:

Year:  2016        PMID: 27190176      PMCID: PMC5812259          DOI: 10.1093/infdis/jiw181

Source DB:  PubMed          Journal:  J Infect Dis        ISSN: 0022-1899            Impact factor:   7.759


  29 in total

1.  Detection of hemagglutinin variants of the pandemic influenza A (H1N1) 2009 virus by pyrosequencing.

Authors:  Marnie Levine; Tiffany G Sheu; Larisa V Gubareva; Vasiliy P Mishin
Journal:  J Clin Microbiol       Date:  2011-02-09       Impact factor: 5.948

2.  Interim estimates of 2014/15 vaccine effectiveness against influenza A(H3N2) from Canada's Sentinel Physician Surveillance Network, January 2015.

Authors:  D M Skowronski; C Chambers; S Sabaiduc; G De Serres; J A Dickinson; A L Winter; S J Drews; K Fonseca; H Charest; J B Gubbay; M Petric; M Krajden; T L Kwindt; C Martineau; A Eshaghi; N Bastien; Y Li
Journal:  Euro Surveill       Date:  2015-01-29

3.  Low effectiveness of seasonal influenza vaccine in preventing laboratory-confirmed influenza in primary care in the United Kingdom: 2014/15 mid-season results.

Authors:  R G Pebody; F Warburton; J Ellis; N Andrews; C Thompson; B von Wissmann; H K Green; S Cottrell; J Johnston; S de Lusignan; C Moore; R Gunson; C Robertson; J McMenamin; M Zambon
Journal:  Euro Surveill       Date:  2015-02-05

4.  Effects of imperfect test sensitivity and specificity on observational studies of influenza vaccine effectiveness.

Authors:  Michael L Jackson; Kenneth J Rothman
Journal:  Vaccine       Date:  2015-02-07       Impact factor: 3.641

5.  The test-negative design for estimating influenza vaccine effectiveness.

Authors:  Michael L Jackson; Jennifer C Nelson
Journal:  Vaccine       Date:  2013-03-13       Impact factor: 3.641

6.  Effectiveness of inactivated influenza vaccines varied substantially with antigenic match from the 2004-2005 season to the 2006-2007 season.

Authors:  Edward A Belongia; Burney A Kieke; James G Donahue; Robert T Greenlee; Amanda Balish; Angie Foust; Stephen Lindstrom; David K Shay
Journal:  J Infect Dis       Date:  2009-01-15       Impact factor: 5.226

7.  Influenza Vaccine Effectiveness Against 2009 Pandemic Influenza A(H1N1) Virus Differed by Vaccine Type During 2013-2014 in the United States.

Authors:  Manjusha Gaglani; Jessica Pruszynski; Kempapura Murthy; Lydia Clipper; Anne Robertson; Michael Reis; Jessie R Chung; Pedro A Piedra; Vasanthi Avadhanula; Mary Patricia Nowalk; Richard K Zimmerman; Michael L Jackson; Lisa A Jackson; Joshua G Petrie; Suzanne E Ohmit; Arnold S Monto; Huong Q McLean; Edward A Belongia; Alicia M Fry; Brendan Flannery
Journal:  J Infect Dis       Date:  2016-01-06       Impact factor: 7.759

8.  Influenza activity - United States, 2014-15 season and composition of the 2015-16 influenza vaccine.

Authors:  Grace D Appiah; Lenee Blanton; Tiffany D'Mello; Krista Kniss; Sophie Smith; Desiree Mustaquim; Craig Steffens; Rosaline Dhara; Jessica Cohen; Sandra S Chaves; Joseph Bresee; Teresa Wallis; Xiyan Xu; Anwar Isa Abd Elal; Larisa Gubareva; David E Wentworth; Jacqueline Katz; Daniel Jernigan; Lynnette Brammer
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2015-06-05       Impact factor: 17.586

Review 9.  Playing hide and seek: how glycosylation of the influenza virus hemagglutinin can modulate the immune response to infection.

Authors:  Michelle D Tate; Emma R Job; Yi-Mo Deng; Vithiagaran Gunalan; Sebastian Maurer-Stroh; Patrick C Reading
Journal:  Viruses       Date:  2014-03-14       Impact factor: 5.048

10.  Interim estimates of 2013-14 seasonal influenza vaccine effectiveness - United States, February 2014.

Authors:  Brendan Flannery; Swathi N Thaker; Jessie Clippard; Arnold S Monto; Suzanne E Ohmit; Richard K Zimmerman; Mary Patricia Nowalk; Manjusha Gaglani; Michael L Jackson; Lisa A Jackson; Edward A Belongia; Huong Q McLean; LaShondra Berman; Angie Foust; Wendy Sessions; Sarah Spencer; Alicia M Fry
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2014-02-21       Impact factor: 17.586

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  60 in total

1.  Prior-Season Vaccination and Risk of Influenza During the 2014-2015 Season in the United States.

Authors:  Jessie R Chung; Brendan Flannery; Richard K Zimmerman; Mary Patricia Nowalk; Michael L Jackson; Lisa A Jackson; Joshua G Petrie; Emily T Martin; Arnold S Monto; Huong Q McLean; Edward A Belongia; Manjusha Gaglani; Alicia M Fry
Journal:  J Infect Dis       Date:  2017-07-15       Impact factor: 5.226

Review 2.  The evolution of seasonal influenza viruses.

Authors:  Velislava N Petrova; Colin A Russell
Journal:  Nat Rev Microbiol       Date:  2017-10-30       Impact factor: 60.633

3.  Prevention of Influenza Hospitalization Among Adults in the United States, 2015-2016: Results From the US Hospitalized Adult Influenza Vaccine Effectiveness Network (HAIVEN).

Authors:  Jill M Ferdinands; Manjusha Gaglani; Emily T Martin; Don Middleton; Arnold S Monto; Kempapura Murthy; Fernanda P Silveira; H Keipp Talbot; Richard Zimmerman; Elif Alyanak; Courtney Strickland; Sarah Spencer; Alicia M Fry
Journal:  J Infect Dis       Date:  2019-09-13       Impact factor: 5.226

4.  Age-specific effects of vaccine egg adaptation and immune priming on A(H3N2) antibody responses following influenza vaccination.

Authors:  Feng Liu; F Liaini Gross; Stacie N Jefferson; Crystal Holiday; Yaohui Bai; Li Wang; Bin Zhou; Min Z Levine
Journal:  J Clin Invest       Date:  2021-04-15       Impact factor: 14.808

5.  A Pyrosequencing-Based Approach to High-Throughput Identification of Influenza A(H3N2) Virus Clades Harboring Antigenic Drift Variants.

Authors:  Vasiliy P Mishin; Tatiana Baranovich; Rebecca Garten; Anton Chesnokov; Anwar I Abd Elal; Michelle Adamczyk; Jennifer LaPlante; Kirsten St George; Alicia M Fry; John Barnes; Stephanie C Chester; Xiyan Xu; Jacqueline M Katz; David E Wentworth; Larisa V Gubareva
Journal:  J Clin Microbiol       Date:  2016-12-28       Impact factor: 5.948

6.  Serial Vaccination and the Antigenic Distance Hypothesis: Effects on Influenza Vaccine Effectiveness During A(H3N2) Epidemics in Canada, 2010-2011 to 2014-2015.

Authors:  Danuta M Skowronski; Catharine Chambers; Gaston De Serres; Suzana Sabaiduc; Anne-Luise Winter; James A Dickinson; Jonathan B Gubbay; Kevin Fonseca; Steven J Drews; Hugues Charest; Christine Martineau; Mel Krajden; Martin Petric; Nathalie Bastien; Yan Li; Derek J Smith
Journal:  J Infect Dis       Date:  2017-04-01       Impact factor: 5.226

7.  Patterns of Influenza Vaccination and Vaccine Effectiveness Among Young US Children Who Receive Outpatient Care for Acute Respiratory Tract Illness.

Authors:  Jessie R Chung; Brendan Flannery; Manjusha Gaglani; Michael E Smith; Evelyn C Reis; Robert W Hickey; Michael L Jackson; Lisa A Jackson; Edward A Belongia; Huong Q McLean; Emily T Martin; Hannah E Segaloff; Sara S Kim; Manish M Patel
Journal:  JAMA Pediatr       Date:  2020-07-01       Impact factor: 16.193

8.  Evaluation of correlates of protection against influenza A(H3N2) and A(H1N1)pdm09 infection: Applications to the hospitalized patient population.

Authors:  Joshua G Petrie; Emily T Martin; Rachel Truscon; Emileigh Johnson; Caroline K Cheng; E J McSpadden; Ryan E Malosh; Adam S Lauring; Lois E Lamerato; Maryna C Eichelberger; Jill M Ferdinands; Arnold S Monto
Journal:  Vaccine       Date:  2019-02-07       Impact factor: 3.641

9.  Multimorbidity is associated with uptake of influenza vaccination.

Authors:  Samantha M Harrison; Melissa Y Wei; Lois E Lamerato; Joshua G Petrie; Emily Toth Martin
Journal:  Vaccine       Date:  2018-05-07       Impact factor: 3.641

10.  Is seasonal vaccination a contributing factor to the selection of influenza epidemic variants?

Authors:  Yong Chong; Hideyuki Ikematsu
Journal:  Hum Vaccin Immunother       Date:  2017-10-18       Impact factor: 3.452

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