Literature DB >> 27173902

Genome of a tardigrade: Horizontal gene transfer or bacterial contamination?

Felix Bemm1, Clemens Leonard Weiß2, Jörg Schultz3, Frank Förster4.   

Abstract

Mesh：

Year:  2016        PMID： 27173902      PMCID： PMC4896698          DOI： 10.1073/pnas.1525116113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN： 0027-8424            Impact factor:   11.205


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  3 in total

1.  The tardigrade Hypsibius dujardini, a new model for studying the evolution of development.

Authors:  Willow N Gabriel; Robert McNuff; Sapna K Patel; T Ryan Gregory; William R Jeck; Corbin D Jones; Bob Goldstein
Journal:  Dev Biol       Date:  2007-10-06       Impact factor: 3.582

2.  Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade.

Authors:  Thomas C Boothby; Jennifer R Tenlen; Frank W Smith; Jeremy R Wang; Kiera A Patanella; Erin Osborne Nishimura; Sophia C Tintori; Qing Li; Corbin D Jones; Mark Yandell; David N Messina; Jarret Glasscock; Bob Goldstein
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-23       Impact factor: 11.205

3.  No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini.

Authors:  Georgios Koutsovoulos; Sujai Kumar; Dominik R Laetsch; Lewis Stevens; Jennifer Daub; Claire Conlon; Habib Maroon; Fran Thomas; Aziz A Aboobaker; Mark Blaxter
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-24       Impact factor: 11.205
  3 in total
  18 in total

1.  Protecting activity of desiccated enzymes.

Authors:  Samantha Piszkiewicz; Kathryn H Gunn; Owen Warmuth; Ashlee Propst; Aakash Mehta; Kenny H Nguyen; Elizabeth Kuhlman; Alex J Guseman; Samantha S Stadmiller; Thomas C Boothby; Saskia B Neher; Gary J Pielak
Journal:  Protein Sci       Date:  2019-03-30       Impact factor: 6.725

Review 2.  Lateral gene transfer between prokaryotes and eukaryotes.

Authors:  Karsten B Sieber; Robin E Bromley; Julie C Dunning Hotopp
Journal:  Exp Cell Res       Date:  2017-02-09       Impact factor: 3.905

3.  Reply to Bemm et al. and Arakawa: Identifying foreign genes in independent Hypsibius dujardini genome assemblies.

Authors:  Thomas C Boothby; Bob Goldstein
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-12       Impact factor: 11.205

4.  The Microbial Community of Tardigrades: Environmental Influence and Species Specificity of Microbiome Structure and Composition.

Authors:  Matteo Vecchi; Irene L G Newton; Michele Cesari; Lorena Rebecchi; Roberto Guidetti
Journal:  Microb Ecol       Date:  2018-01-15       Impact factor: 4.552

5.  Ultralow Input Genome Sequencing Library Preparation from a Single Tardigrade Specimen.

Authors:  Yuki Yoshida; Sayuri Konno; Ryousuke Nishino; Yumi Murai; Masaru Tomita; Kazuharu Arakawa
Journal:  J Vis Exp       Date:  2018-07-15       Impact factor: 1.355

Review 6.  The nervous and visual systems of onychophorans and tardigrades: learning about arthropod evolution from their closest relatives.

Authors:  Christine Martin; Vladimir Gross; Lars Hering; Benjamin Tepper; Henry Jahn; Ivo de Sena Oliveira; Paul Anthony Stevenson; Georg Mayer
Journal:  J Comp Physiol A Neuroethol Sens Neural Behav Physiol       Date:  2017-06-09       Impact factor: 1.836

7.  Tardigrades Use Intrinsically Disordered Proteins to Survive Desiccation.

Authors:  Thomas C Boothby; Hugo Tapia; Alexandra H Brozena; Samantha Piszkiewicz; Austin E Smith; Ilaria Giovannini; Lorena Rebecchi; Gary J Pielak; Doug Koshland; Bob Goldstein
Journal:  Mol Cell       Date:  2017-03-16       Impact factor: 17.970

8.  Detecting Structural Variants and Associated Gene Presence-Absence Variation Phenomena in the Genomes of Marine Organisms.

Authors:  Marco Sollitto; Nathan J Kenny; Samuele Greco; Carmen Federica Tucci; Andrew D Calcino; Marco Gerdol
Journal:  Methods Mol Biol       Date:  2022

9.  Old genes in new places: A taxon-rich analysis of interdomain lateral gene transfer events.

Authors:  Auden Cote-L'Heureux; Xyrus X Maurer-Alcalá; Laura A Katz
Journal:  PLoS Genet       Date:  2022-06-22       Impact factor: 6.020

Review 10.  Deciphering the Biological Enigma-Genomic Evolution Underlying Anhydrobiosis in the Phylum Tardigrada and the Chironomid Polypedilum vanderplanki.

Authors:  Yuki Yoshida; Sae Tanaka
Journal:  Insects       Date:  2022-06-19       Impact factor: 3.139
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