Literature DB >> 17996863

The tardigrade Hypsibius dujardini, a new model for studying the evolution of development.

Willow N Gabriel1, Robert McNuff, Sapna K Patel, T Ryan Gregory, William R Jeck, Corbin D Jones, Bob Goldstein.   

Abstract

Studying development in diverse taxa can address a central issue in evolutionary biology: how morphological diversity arises through the evolution of developmental mechanisms. Two of the best-studied developmental model organisms, the arthropod Drosophila and the nematode Caenorhabditis elegans, have been found to belong to a single protostome superclade, the Ecdysozoa. This finding suggests that a closely related ecdysozoan phylum could serve as a valuable model for studying how developmental mechanisms evolve in ways that can produce diverse body plans. Tardigrades, also called water bears, make up a phylum of microscopic ecdysozoan animals. Tardigrades share many characteristics with C. elegans and Drosophila that could make them useful laboratory models, but long-term culturing of tardigrades historically has been a challenge, and there have been few studies of tardigrade development. Here, we show that the tardigrade Hypsibius dujardini can be cultured continuously for decades and can be cryopreserved. We report that H. dujardini has a compact genome, a little smaller than that of C. elegans or Drosophila, and that sequence evolution has occurred at a typical rate. H. dujardini has a short generation time, 13-14 days at room temperature. We have found that the embryos of H. dujardini have a stereotyped cleavage pattern with asymmetric cell divisions, nuclear migrations, and cell migrations occurring in reproducible patterns. We present a cell lineage of the early embryo and an embryonic staging series. We expect that these data can serve as a platform for using H. dujardini as a model for studying the evolution of developmental mechanisms.

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Year:  2007        PMID: 17996863     DOI: 10.1016/j.ydbio.2007.09.055

Source DB:  PubMed          Journal:  Dev Biol        ISSN: 0012-1606            Impact factor:   3.582


  46 in total

Review 1.  The Future of Cell Biology: Emerging Model Organisms.

Authors:  Bob Goldstein; Nicole King
Journal:  Trends Cell Biol       Date:  2016-09-14       Impact factor: 20.808

2.  Detection of a troponin I-like protein in non-striated muscle of the tardigrades (water bears).

Authors:  Takashi Obinata; Kanako Ono; Shoichiro Ono
Journal:  Bioarchitecture       Date:  2011-03

3.  Genome of a tardigrade: Horizontal gene transfer or bacterial contamination?

Authors:  Felix Bemm; Clemens Leonard Weiß; Jörg Schultz; Frank Förster
Journal:  Proc Natl Acad Sci U S A       Date:  2016-05-12       Impact factor: 11.205

4.  Loss of intermediate regions of perpendicular body axes contributed to miniaturization of tardigrades.

Authors:  Mandy Game; Frank W Smith
Journal:  Proc Biol Sci       Date:  2020-07-29       Impact factor: 5.349

5.  The Microbial Community of Tardigrades: Environmental Influence and Species Specificity of Microbiome Structure and Composition.

Authors:  Matteo Vecchi; Irene L G Newton; Michele Cesari; Lorena Rebecchi; Roberto Guidetti
Journal:  Microb Ecol       Date:  2018-01-15       Impact factor: 4.552

6.  Transcriptome survey of the anhydrobiotic tardigrade Milnesium tardigradum in comparison with Hypsibius dujardini and Richtersius coronifer.

Authors:  Brahim Mali; Markus A Grohme; Frank Förster; Thomas Dandekar; Martina Schnölzer; Dirk Reuter; Weronika Wełnicz; Ralph O Schill; Marcus Frohme
Journal:  BMC Genomics       Date:  2010-03-12       Impact factor: 3.969

7.  Evidence for extensive horizontal gene transfer from the draft genome of a tardigrade.

Authors:  Thomas C Boothby; Jennifer R Tenlen; Frank W Smith; Jeremy R Wang; Kiera A Patanella; Erin Osborne Nishimura; Sophia C Tintori; Qing Li; Corbin D Jones; Mark Yandell; David N Messina; Jarret Glasscock; Bob Goldstein
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-23       Impact factor: 11.205

8.  Naturally occurring fluorescence protects the eutardigrade Paramacrobiotus sp. from ultraviolet radiation.

Authors:  Harikumar R Suma; Swathi Prakash; Sandeep M Eswarappa
Journal:  Biol Lett       Date:  2020-10-14       Impact factor: 3.703

9.  No evidence for extensive horizontal gene transfer in the genome of the tardigrade Hypsibius dujardini.

Authors:  Georgios Koutsovoulos; Sujai Kumar; Dominik R Laetsch; Lewis Stevens; Jennifer Daub; Claire Conlon; Habib Maroon; Fran Thomas; Aziz A Aboobaker; Mark Blaxter
Journal:  Proc Natl Acad Sci U S A       Date:  2016-03-24       Impact factor: 11.205

10.  Tardigrade workbench: comparing stress-related proteins, sequence-similar and functional protein clusters as well as RNA elements in tardigrades.

Authors:  Frank Förster; Chunguang Liang; Alexander Shkumatov; Daniela Beisser; Julia C Engelmann; Martina Schnölzer; Marcus Frohme; Tobias Müller; Ralph O Schill; Thomas Dandekar
Journal:  BMC Genomics       Date:  2009-10-12       Impact factor: 3.969

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