Literature DB >> 27159499

Avoiding artefacts when counting polymerized actin in live cells with LifeAct fused to fluorescent proteins.

Naomi Courtemanche1, Thomas D Pollard1,2,3, Qian Chen1.   

Abstract

When tagged with a fluorescent protein, actin is not fully functional, so the LifeAct peptide fused to a fluorescent protein is widely used to localize actin filaments in live cells. However, we find that these fusion proteins have many concentration-dependent effects on actin assembly in vitro and in fission yeast cells. mEGFP-LifeAct inhibits actin assembly during endocytosis as well as assembly and constriction of the cytokinetic contractile ring. Purified mEGFP-LifeAct and LifeAct-mCherry bind actin filaments with Kd values of ∼10 μM. LifeAct-mCherry can promote actin filament nucleation and either promote or inhibit filament elongation. Both separately and together, profilin and formins suppress these effects. LifeAct-mCherry can also promote or inhibit actin filament severing by cofilin. These concentration-dependent effects mean that caution is necessary when overexpressing LifeAct fusion proteins to label actin filaments in cells. Therefore, we used low micromolar concentrations of tagged LifeAct to follow assembly and disassembly of actin filaments in cells. Careful titrations also gave an estimate of a peak of ∼190,000 actin molecules (∼500 μm) in the fission yeast contractile ring. These filaments shorten from ∼500 to ∼100 subunits as the ring constricts.

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Year:  2016        PMID: 27159499      PMCID: PMC5509211          DOI: 10.1038/ncb3351

Source DB:  PubMed          Journal:  Nat Cell Biol        ISSN: 1465-7392            Impact factor:   28.824


  42 in total

1.  Spatial and temporal pathway for assembly and constriction of the contractile ring in fission yeast cytokinesis.

Authors:  Jian-Qiu Wu; Jeffrey R Kuhn; David R Kovar; Thomas D Pollard
Journal:  Dev Cell       Date:  2003-11       Impact factor: 12.270

2.  Energetics and kinetics of cooperative cofilin-actin filament interactions.

Authors:  Wenxiang Cao; Jim P Goodarzi; Enrique M De La Cruz
Journal:  J Mol Biol       Date:  2006-06-27       Impact factor: 5.469

3.  Mechanism of actin filament turnover by severing and nucleation at different concentrations of ADF/cofilin.

Authors:  Ernesto Andrianantoandro; Thomas D Pollard
Journal:  Mol Cell       Date:  2006-10-06       Impact factor: 17.970

4.  Cofilin increases the torsional flexibility and dynamics of actin filaments.

Authors:  Ewa Prochniewicz; Neal Janson; David D Thomas; Enrique M De la Cruz
Journal:  J Mol Biol       Date:  2005-09-26       Impact factor: 5.469

5.  Pyrene actin: documentation of the validity of a sensitive assay for actin polymerization.

Authors:  J A Cooper; S B Walker; T D Pollard
Journal:  J Muscle Res Cell Motil       Date:  1983-04       Impact factor: 2.698

6.  Visualizing the functional architecture of the endocytic machinery.

Authors:  Andrea Picco; Markus Mund; Jonas Ries; François Nédélec; Marko Kaksonen
Journal:  Elife       Date:  2015-02-12       Impact factor: 8.140

7.  Competitive displacement of cofilin can promote actin filament severing.

Authors:  W Austin Elam; Hyeran Kang; Enrique M De La Cruz
Journal:  Biochem Biophys Res Commun       Date:  2013-08-02       Impact factor: 3.575

8.  Actin filament severing by cofilin dismantles actin patches and produces mother filaments for new patches.

Authors:  Qian Chen; Thomas D Pollard
Journal:  Curr Biol       Date:  2013-05-30       Impact factor: 10.834

9.  Movement of yeast cortical actin cytoskeleton visualized in vivo.

Authors:  T Doyle; D Botstein
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-30       Impact factor: 11.205

10.  The fission yeast cytokinesis formin Cdc12p is a barbed end actin filament capping protein gated by profilin.

Authors:  David R Kovar; Jeffrey R Kuhn; Andrea L Tichy; Thomas D Pollard
Journal:  J Cell Biol       Date:  2003-06-09       Impact factor: 10.539

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  51 in total

Review 1.  Quantitative high-precision imaging of myosin-dependent filamentous actin dynamics.

Authors:  Sawako Yamashiro; Naoki Watanabe
Journal:  J Muscle Res Cell Motil       Date:  2019-07-16       Impact factor: 2.698

2.  Convection-Induced Biased Distribution of Actin Probes in Live Cells.

Authors:  Sawako Yamashiro; Daisuke Taniguchi; Soichiro Tanaka; Tai Kiuchi; Dimitrios Vavylonis; Naoki Watanabe
Journal:  Biophys J       Date:  2018-11-22       Impact factor: 4.033

Review 3.  Global treadmilling coordinates actin turnover and controls the size of actin networks.

Authors:  Marie-France Carlier; Shashank Shekhar
Journal:  Nat Rev Mol Cell Biol       Date:  2017-03-01       Impact factor: 94.444

Review 4.  Mechanisms of contractile ring tension production and constriction.

Authors:  Ben O'Shaughnessy; Sathish Thiyagarajan
Journal:  Biophys Rev       Date:  2018-11-19

5.  Persistent nuclear actin filaments inhibit transcription by RNA polymerase II.

Authors:  Leonid A Serebryannyy; Megan Parilla; Paolo Annibale; Christina M Cruz; Kyle Laster; Enrico Gratton; Dmitri Kudryashov; Steven T Kosak; Cara J Gottardi; Primal de Lanerolle
Journal:  J Cell Sci       Date:  2016-08-02       Impact factor: 5.285

6.  Resolving single-actin filaments within the contractile ring of fission yeast.

Authors:  Caroline Laplante
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-31       Impact factor: 11.205

7.  Bond Type and Discretization of Nonmuscle Myosin II Are Critical for Simulated Contractile Dynamics.

Authors:  Daniel B Cortes; Max Gordon; Francois Nédélec; Amy S Maddox
Journal:  Biophys J       Date:  2020-04-21       Impact factor: 4.033

Review 8.  Molecular Mechanism of Cytokinesis.

Authors:  Thomas D Pollard; Ben O'Shaughnessy
Journal:  Annu Rev Biochem       Date:  2019-01-16       Impact factor: 23.643

9.  A network of conserved formins, regulated by the guanine exchange factor EXC-5 and the GTPase CDC-42, modulates tubulogenesis in vivo.

Authors:  Daniel D Shaye; Iva Greenwald
Journal:  Development       Date:  2016-10-03       Impact factor: 6.868

10.  Internetwork competition for monomers governs actin cytoskeleton organization.

Authors:  Cristian Suarez; David R Kovar
Journal:  Nat Rev Mol Cell Biol       Date:  2016-09-14       Impact factor: 94.444

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