Literature DB >> 25675087

Visualizing the functional architecture of the endocytic machinery.

Andrea Picco1, Markus Mund1, Jonas Ries1, François Nédélec1, Marko Kaksonen1.   

Abstract

Clathrin-mediated endocytosis is an essential process that forms vesicles from the plasma membrane. Although most of the protein components of the endocytic protein machinery have been thoroughly characterized, their organization at the endocytic site is poorly understood. We developed a fluorescence microscopy method to track the average positions of yeast endocytic proteins in relation to each other with a time precision below 1 s and with a spatial precision of ~10 nm. With these data, integrated with shapes of endocytic membrane intermediates and with superresolution imaging, we could visualize the dynamic architecture of the endocytic machinery. We showed how different coat proteins are distributed within the coat structure and how the assembly dynamics of N-BAR proteins relate to membrane shape changes. Moreover, we found that the region of actin polymerization is located at the base of the endocytic invagination, with the growing ends of filaments pointing toward the plasma membrane.

Entities:  

Keywords:  S. cerevisiae; actin; biophysics; cell biology; endocytosis; live-cell imaging; structural biology

Mesh:

Substances:

Year:  2015        PMID: 25675087      PMCID: PMC4357291          DOI: 10.7554/eLife.04535

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  81 in total

1.  A non-Gaussian distribution quantifies distances measured with fluorescence localization techniques.

Authors:  L Stirling Churchman; Henrik Flyvbjerg; James A Spudich
Journal:  Biophys J       Date:  2005-10-28       Impact factor: 4.033

2.  A modular design for the clathrin- and actin-mediated endocytosis machinery.

Authors:  Marko Kaksonen; Christopher P Toret; David G Drubin
Journal:  Cell       Date:  2005-10-21       Impact factor: 41.582

3.  In vivo dynamics of clathrin and its adaptor-dependent recruitment to the actin-based endocytic machinery in yeast.

Authors:  Thomas M Newpher; Robin P Smith; Vance Lemmon; Sandra K Lemmon
Journal:  Dev Cell       Date:  2005-07       Impact factor: 12.270

4.  Feature point tracking and trajectory analysis for video imaging in cell biology.

Authors:  I F Sbalzarini; P Koumoutsakos
Journal:  J Struct Biol       Date:  2005-08       Impact factor: 2.867

5.  Endocytic vesicle scission by lipid phase boundary forces.

Authors:  Jian Liu; Marko Kaksonen; David G Drubin; George Oster
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-26       Impact factor: 11.205

6.  Dissection of Arp2/3 complex actin nucleation mechanism and distinct roles for its nucleation-promoting factors in Saccharomyces cerevisiae.

Authors:  Jessica L D'Agostino; Bruce L Goode
Journal:  Genetics       Date:  2005-09       Impact factor: 4.562

7.  Endocytic internalization in budding yeast requires coordinated actin nucleation and myosin motor activity.

Authors:  Yidi Sun; Adam C Martin; David G Drubin
Journal:  Dev Cell       Date:  2006-07       Impact factor: 12.270

8.  Molecular architecture of a kinetochore-microtubule attachment site.

Authors:  Ajit P Joglekar; David C Bouck; Jeffrey N Molk; Kerry S Bloom; Edward D Salmon
Journal:  Nat Cell Biol       Date:  2006-05-21       Impact factor: 28.824

9.  Counting cytokinesis proteins globally and locally in fission yeast.

Authors:  Jian-Qiu Wu; Thomas D Pollard
Journal:  Science       Date:  2005-10-14       Impact factor: 47.728

Review 10.  The BAR domain proteins: molding membranes in fission, fusion, and phagy.

Authors:  Gang Ren; Parimala Vajjhala; Janet S Lee; Barbara Winsor; Alan L Munn
Journal:  Microbiol Mol Biol Rev       Date:  2006-03       Impact factor: 11.056

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  53 in total

1.  Actin growth profile in clathrin-mediated endocytosis.

Authors:  D J Tweten; P V Bayly; A E Carlsson
Journal:  Phys Rev E       Date:  2017-05-23       Impact factor: 2.529

2.  Onsager's irreversible thermodynamics of the dynamics of transient pores in spherical lipid vesicles.

Authors:  L Martínez-Balbuena; E Hernández-Zapata; I Santamaría-Holek
Journal:  Eur Biophys J       Date:  2015-06-21       Impact factor: 1.733

3.  Design principles for robust vesiculation in clathrin-mediated endocytosis.

Authors:  Julian E Hassinger; George Oster; David G Drubin; Padmini Rangamani
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-26       Impact factor: 11.205

4.  Local Turgor Pressure Reduction via Channel Clustering.

Authors:  Jonah K Scher-Zagier; Anders E Carlsson
Journal:  Biophys J       Date:  2016-12-20       Impact factor: 4.033

5.  Quantitative mapping of fluorescently tagged cellular proteins using FCS-calibrated four-dimensional imaging.

Authors:  Antonio Z Politi; Yin Cai; Nike Walther; M Julius Hossain; Birgit Koch; Malte Wachsmuth; Jan Ellenberg
Journal:  Nat Protoc       Date:  2018-05-24       Impact factor: 13.491

6.  Single-Turnover Activation of Arp2/3 Complex by Dip1 May Balance Nucleation of Linear versus Branched Actin Filaments.

Authors:  Connor J Balzer; Andrew R Wagner; Luke A Helgeson; Brad J Nolen
Journal:  Curr Biol       Date:  2019-09-26       Impact factor: 10.834

7.  Endocytic proteins are partitioned at the edge of the clathrin lattice in mammalian cells.

Authors:  Kem A Sochacki; Andrea M Dickey; Marie-Paule Strub; Justin W Taraska
Journal:  Nat Cell Biol       Date:  2017-03-27       Impact factor: 28.824

Review 8.  Membrane bending by actin polymerization.

Authors:  Anders E Carlsson
Journal:  Curr Opin Cell Biol       Date:  2017-12-05       Impact factor: 8.382

Review 9.  How Kinetochore Architecture Shapes the Mechanisms of Its Function.

Authors:  Ajit P Joglekar; Alexander A Kukreja
Journal:  Curr Biol       Date:  2017-08-21       Impact factor: 10.834

10.  The Sla1 adaptor-clathrin interaction regulates coat formation and progression of endocytosis.

Authors:  Thomas O Tolsma; Lena M Cuevas; Santiago M Di Pietro
Journal:  Traffic       Date:  2018-04-11       Impact factor: 6.215

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