Literature DB >> 27145876

Design Principles of Length Control of Cytoskeletal Structures.

Lishibanya Mohapatra1, Bruce L Goode2, Predrag Jelenkovic3, Rob Phillips4, Jane Kondev1.   

Abstract

Cells contain elaborate and interconnected networks of protein polymers, which make up the cytoskeleton. The cytoskeleton governs the internal positioning and movement of vesicles and organelles and controls dynamic changes in cell polarity, shape, and movement. Many of these processes require tight control of the size and shape of cytoskeletal structures, which is achieved despite rapid turnover of their molecular components. Here we review mechanisms by which cells control the size of filamentous cytoskeletal structures, from the point of view of simple quantitative models that take into account stochastic dynamics of their assembly and disassembly. Significantly, these models make experimentally testable predictions that distinguish different mechanisms of length control. Although the primary focus of this review is on cytoskeletal structures, we believe that the broader principles and mechanisms discussed herein will apply to a range of other subcellular structures whose sizes are tightly controlled and are linked to their functions.

Entities:  

Keywords:  actin filaments; living polymers; master equation; microtubules; organelle size

Mesh:

Year:  2016        PMID: 27145876      PMCID: PMC5466818          DOI: 10.1146/annurev-biophys-070915-094206

Source DB:  PubMed          Journal:  Annu Rev Biophys        ISSN: 1936-122X            Impact factor:   12.981


  53 in total

1.  Mechanism of actin filament turnover by severing and nucleation at different concentrations of ADF/cofilin.

Authors:  Ernesto Andrianantoandro; Thomas D Pollard
Journal:  Mol Cell       Date:  2006-10-06       Impact factor: 17.970

2.  Homeostatic actin cytoskeleton networks are regulated by assembly factor competition for monomers.

Authors:  Thomas A Burke; Jenna R Christensen; Elisabeth Barone; Cristian Suarez; Vladimir Sirotkin; David R Kovar
Journal:  Curr Biol       Date:  2014-02-20       Impact factor: 10.834

3.  Molecular mechanisms for microtubule length regulation by kinesin-8 and XMAP215 proteins.

Authors:  Louis Reese; Anna Melbinger; Erwin Frey
Journal:  Interface Focus       Date:  2014-12-06       Impact factor: 3.906

4.  Coordinated regulation of actin filament turnover by a high-molecular-weight Srv2/CAP complex, cofilin, profilin, and Aip1.

Authors:  Heath I Balcer; Anya L Goodman; Avital A Rodal; Ellen Smith; Jamie Kugler; John E Heuser; Bruce L Goode
Journal:  Curr Biol       Date:  2003-12-16       Impact factor: 10.834

5.  Displacement of formins from growing barbed ends by bud14 is critical for actin cable architecture and function.

Authors:  Melissa Chesarone; Christopher J Gould; James B Moseley; Bruce L Goode
Journal:  Dev Cell       Date:  2009-02       Impact factor: 12.270

Review 6.  Tropomyosin and ADF/cofilin as collaborators and competitors.

Authors:  Thomas B Kuhn; James R Bamburg
Journal:  Adv Exp Med Biol       Date:  2008       Impact factor: 2.622

Review 7.  Biophysics of actin filament severing by cofilin.

Authors:  W Austin Elam; Hyeran Kang; Enrique M De la Cruz
Journal:  FEBS Lett       Date:  2013-02-05       Impact factor: 4.124

8.  Mitochondrial network size scaling in budding yeast.

Authors:  Susanne M Rafelski; Matheus P Viana; Yi Zhang; Yee-Hung M Chan; Kurt S Thorn; Phoebe Yam; Jennifer C Fung; Hao Li; Luciano da F Costa; Wallace F Marshall
Journal:  Science       Date:  2012-11-09       Impact factor: 47.728

9.  Intraflagellar transport balances continuous turnover of outer doublet microtubules: implications for flagellar length control.

Authors:  W F Marshall; J L Rosenbaum
Journal:  J Cell Biol       Date:  2001-10-29       Impact factor: 10.539

10.  Antenna Mechanism of Length Control of Actin Cables.

Authors:  Lishibanya Mohapatra; Bruce L Goode; Jane Kondev
Journal:  PLoS Comput Biol       Date:  2015-06-24       Impact factor: 4.475

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  16 in total

1.  Theory of Cytoskeletal Reorganization during Cross-Linker-Mediated Mitotic Spindle Assembly.

Authors:  Adam R Lamson; Christopher J Edelmaier; Matthew A Glaser; Meredith D Betterton
Journal:  Biophys J       Date:  2019-04-13       Impact factor: 4.033

2.  Predicted Effects of Severing Enzymes on the Length Distribution and Total Mass of Microtubules.

Authors:  Yin-Wei Kuo; Olivier Trottier; Jonathon Howard
Journal:  Biophys J       Date:  2019-10-25       Impact factor: 4.033

3.  The Limiting-Pool Mechanism Fails to Control the Size of Multiple Organelles.

Authors:  Lishibanya Mohapatra; Thibaut J Lagny; David Harbage; Predrag R Jelenkovic; Jane Kondev
Journal:  Cell Syst       Date:  2017-05-24       Impact factor: 10.304

4.  Quantitative Analysis of Actin Cable Length in Yeast.

Authors:  Shane G McInally; Jane Kondev; Bruce L Goode
Journal:  Bio Protoc       Date:  2022-05-05

5.  Equilibrium mechanisms of self-limiting assembly.

Authors:  Michael F Hagan; Gregory M Grason
Journal:  Rev Mod Phys       Date:  2021-06-11       Impact factor: 50.485

6.  Exact Length Distribution of Filamentous Structures Assembled from a Finite Pool of Subunits.

Authors:  David Harbage; Jané Kondev
Journal:  J Phys Chem B       Date:  2016-05-16       Impact factor: 2.991

7.  Nonequilibrium phase diagrams for actomyosin networks.

Authors:  Simon L Freedman; Glen M Hocky; Shiladitya Banerjee; Aaron R Dinner
Journal:  Soft Matter       Date:  2018-09-26       Impact factor: 3.679

8.  MyD88 oligomer size functions as a physical threshold to trigger IL1R Myddosome signaling.

Authors:  Rafael Deliz-Aguirre; Fakun Cao; Fenja H U Gerpott; Nichanok Auevechanichkul; Mariam Chupanova; YeVin Mun; Elke Ziska; Marcus J Taylor
Journal:  J Cell Biol       Date:  2021-05-06       Impact factor: 10.539

9.  Effects of random hydrolysis on biofilament length distributions in a shared subunit pool.

Authors:  Sankeert Satheesan; Binayak Banerjee; Dipjyoti Das
Journal:  Biophys J       Date:  2021-12-23       Impact factor: 4.033

10.  Leading edge maintenance in migrating cells is an emergent property of branched actin network growth.

Authors:  Rikki M Garner; Julie A Theriot
Journal:  Elife       Date:  2022-03-11       Impact factor: 8.713

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