Literature DB >> 34954156

Effects of random hydrolysis on biofilament length distributions in a shared subunit pool.

Sankeert Satheesan1, Binayak Banerjee1, Dipjyoti Das2.   

Abstract

The sizes of filamentous structures in a cell are often regulated for many physiological processes. A key question in cell biology is how such size control is achieved. Here, we theoretically study the length distributions of multiple filaments, growing by stochastic assembly and disassembly of subunits from a limiting subunit pool. Importantly, we consider a chemical switching of subunits (hydrolysis) prevalent in many biofilaments like microtubules (MTs). We show by simulations of different models that hydrolysis leads to a skewed unimodal length distribution for a single MT. In contrast, hydrolysis can lead to bimodal distributions of individual lengths for two MTs, where individual filaments toggle stochastically between bigger and smaller sizes. For more than two MTs, length distributions are also bimodal, although the bimodality becomes less prominent. We further show that this collective phenomenon is connected with the nonequilibrium nature of hydrolysis, and the bimodality disappears for reversible dynamics. Consistent with earlier theoretical studies, a homogeneous subunit pool, without hydrolysis, cannot control filament lengths. We thus elucidate the role of hydrolysis as a control mechanism on MT length diversity.
Copyright © 2021 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2021        PMID: 34954156      PMCID: PMC8822617          DOI: 10.1016/j.bpj.2021.12.028

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  68 in total

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Journal:  Mol Biol Cell       Date:  2019-10-02       Impact factor: 4.138

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Journal:  Cell Syst       Date:  2017-05-24       Impact factor: 10.304

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Journal:  Mol Biol Cell       Date:  1992-10       Impact factor: 4.138

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Journal:  Biochemistry       Date:  1981-03-31       Impact factor: 3.162

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Journal:  Dev Cell       Date:  2011-08-16       Impact factor: 12.270

9.  Sizes of actin networks sharing a common environment are determined by the relative rates of assembly.

Authors:  Adrien Antkowiak; Audrey Guillotin; Micaela Boiero Sanders; Jessica Colombo; Renaud Vincentelli; Alphée Michelot
Journal:  PLoS Biol       Date:  2019-06-10       Impact factor: 8.029

10.  Kinesin Kip2 enhances microtubule growth in vitro through length-dependent feedback on polymerization and catastrophe.

Authors:  Anneke Hibbel; Aliona Bogdanova; Mohammed Mahamdeh; Anita Jannasch; Marko Storch; Erik Schäffer; Dimitris Liakopoulos; Jonathon Howard
Journal:  Elife       Date:  2015-11-18       Impact factor: 8.140

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