Literature DB >> 27140641

Intercellular signaling through secreted proteins induces free-energy gradient-directed cell movement.

Nataly Kravchenko-Balasha1, Young Shik Shin2, Alex Sutherland1, R D Levine3, James R Heath4.   

Abstract

Controlling cell migration is important in tissue engineering and medicine. Cell motility depends on factors such as nutrient concentration gradients and soluble factor signaling. In particular, cell-cell signaling can depend on cell-cell separation distance and can influence cellular arrangements in bulk cultures. Here, we seek a physical-based approach, which identifies a potential governed by cell-cell signaling that induces a directed cell-cell motion. A single-cell barcode chip (SCBC) was used to experimentally interrogate secreted proteins in hundreds of isolated glioblastoma brain cancer cell pairs and to monitor their relative motions over time. We used these trajectories to identify a range of cell-cell separation distances where the signaling was most stable. We then used a thermodynamics-motivated analysis of secreted protein levels to characterize free-energy changes for different cell-cell distances. We show that glioblastoma cell-cell movement can be described as Brownian motion biased by cell-cell potential. To demonstrate that the free-energy potential as determined by the signaling is the driver of motion, we inhibited two proteins most involved in maintaining the free-energy gradient. Following inhibition, cell pairs showed an essentially random Brownian motion, similar to the case for untreated, isolated single cells.

Entities:  

Keywords:  Brownian dynamics; Langevin equation; cell motility; cell–cell force; surprisal analysis

Mesh:

Substances:

Year:  2016        PMID: 27140641      PMCID: PMC4878481          DOI: 10.1073/pnas.1602171113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

1.  Single-cell proteomic chip for profiling intracellular signaling pathways in single tumor cells.

Authors:  Qihui Shi; Lidong Qin; Wei Wei; Feng Geng; Rong Fan; Young Shik Shin; Deliang Guo; Leroy Hood; Paul S Mischel; James R Heath
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-27       Impact factor: 11.205

2.  Physical limits on cellular sensing of spatial gradients.

Authors:  Bo Hu; Wen Chen; Wouter-Jan Rappel; Herbert Levine
Journal:  Phys Rev Lett       Date:  2010-07-23       Impact factor: 9.161

3.  Information-theoretic analysis of phenotype changes in early stages of carcinogenesis.

Authors:  F Remacle; Nataly Kravchenko-Balasha; Alexander Levitzki; R D Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-17       Impact factor: 11.205

4.  Robustness in bacterial chemotaxis.

Authors:  U Alon; M G Surette; N Barkai; S Leibler
Journal:  Nature       Date:  1999-01-14       Impact factor: 49.962

5.  Molecular determinants of the response of glioblastomas to EGFR kinase inhibitors.

Authors:  Ingo K Mellinghoff; Maria Y Wang; Igor Vivanco; Daphne A Haas-Kogan; Shaojun Zhu; Ederlyn Q Dia; Kan V Lu; Koji Yoshimoto; Julie H Y Huang; Dennis J Chute; Bridget L Riggs; Steve Horvath; Linda M Liau; Webster K Cavenee; P Nagesh Rao; Rameen Beroukhim; Timothy C Peck; Jeffrey C Lee; William R Sellers; David Stokoe; Michael Prados; Timothy F Cloughesy; Charles L Sawyers; Paul S Mischel
Journal:  N Engl J Med       Date:  2005-11-10       Impact factor: 91.245

6.  Chemistries for patterning robust DNA microbarcodes enable multiplex assays of cytoplasm proteins from single cancer cells.

Authors:  Young Shik Shin; Habib Ahmad; Qihui Shi; Hyungjun Kim; Tod A Pascal; Rong Fan; William A Goddard; James R Heath
Journal:  Chemphyschem       Date:  2010-10-04       Impact factor: 3.102

7.  The physics of eukaryotic chemotaxis.

Authors:  Herbert Levine; Wouter-Jan Rappel
Journal:  Phys Today       Date:  2013-02-01       Impact factor: 4.000

8.  Quantitating cell-cell interaction functions with applications to glioblastoma multiforme cancer cells.

Authors:  Jun Wang; Douglas Tham; Wei Wei; Young Shik Shin; Chao Ma; Habib Ahmad; Qihui Shi; Jenkan Yu; Raphael D Levine; James R Heath
Journal:  Nano Lett       Date:  2012-11-07       Impact factor: 11.189

9.  Forcing contact inhibition of locomotion.

Authors:  Alice Roycroft; Roberto Mayor
Journal:  Trends Cell Biol       Date:  2015-05-13       Impact factor: 20.808

10.  Migration of individual microvessel endothelial cells: stochastic model and parameter measurement.

Authors:  C L Stokes; D A Lauffenburger; S K Williams
Journal:  J Cell Sci       Date:  1991-06       Impact factor: 5.285

View more
  13 in total

Review 1.  Top-down models in biology: explanation and control of complex living systems above the molecular level.

Authors:  Giovanni Pezzulo; Michael Levin
Journal:  J R Soc Interface       Date:  2016-11       Impact factor: 4.118

2.  Personalized disease signatures through information-theoretic compaction of big cancer data.

Authors:  Swetha Vasudevan; Efrat Flashner-Abramson; F Remacle; R D Levine; Nataly Kravchenko-Balasha
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-05       Impact factor: 11.205

Review 3.  Single cell proteomics in biomedicine: High-dimensional data acquisition, visualization, and analysis.

Authors:  Yapeng Su; Qihui Shi; Wei Wei
Journal:  Proteomics       Date:  2017-02       Impact factor: 3.984

4.  Computational quantification and characterization of independently evolving cellular subpopulations within tumors is critical to inhibit anti-cancer therapy resistance.

Authors:  Heba Alkhatib; Ariel M Rubinstein; Amichay Meirovitz; Nataly Kravchenko-Balasha; Swetha Vasudevan; Efrat Flashner-Abramson; Shira Stefansky; Sangita Roy Chowdhury; Solomon Oguche; Tamar Peretz-Yablonsky; Avital Granit; Zvi Granot; Ittai Ben-Porath; Kim Sheva; Jon Feldman; Noa E Cohen
Journal:  Genome Med       Date:  2022-10-20       Impact factor: 15.266

Review 5.  Microchip-based single-cell functional proteomics for biomedical applications.

Authors:  Yao Lu; Liu Yang; Wei Wei; Qihui Shi
Journal:  Lab Chip       Date:  2017-03-29       Impact factor: 6.799

6.  Thermodynamic energetics underlying genomic instability and whole-genome doubling in cancer.

Authors:  Francoise Remacle; Thomas G Graeber; R D Levine
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-21       Impact factor: 11.205

Review 7.  Measuring single-cell protein secretion in immunology: Technologies, advances, and applications.

Authors:  Olivia T M Bucheli; Ingibjörg Sigvaldadóttir; Klaus Eyer
Journal:  Eur J Immunol       Date:  2021-04-01       Impact factor: 5.532

Review 8.  Advances of Single-Cell Protein Analysis.

Authors:  Lixing Liu; Deyong Chen; Junbo Wang; Jian Chen
Journal:  Cells       Date:  2020-05-20       Impact factor: 6.600

9.  Multi-omic single-cell snapshots reveal multiple independent trajectories to drug tolerance in a melanoma cell line.

Authors:  Yapeng Su; Melissa E Ko; Hanjun Cheng; Ronghui Zhu; Min Xue; Jessica Wang; Jihoon W Lee; Luke Frankiw; Alexander Xu; Stephanie Wong; Lidia Robert; Kaitlyn Takata; Dan Yuan; Yue Lu; Sui Huang; Antoni Ribas; Raphael Levine; Garry P Nolan; Wei Wei; Sylvia K Plevritis; Guideng Li; David Baltimore; James R Heath
Journal:  Nat Commun       Date:  2020-05-11       Impact factor: 14.919

10.  Exploring Alzheimer's Disease Molecular Variability via Calculation of Personalized Transcriptional Signatures.

Authors:  Hila Dagan; Efrat Flashner-Abramson; Swetha Vasudevan; Maria R Jubran; Ehud Cohen; Nataly Kravchenko-Balasha
Journal:  Biomolecules       Date:  2020-03-26
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.