Literature DB >> 27128383

Sequestration-Mediated Downregulation of de Novo Purine Biosynthesis by AMPK.

Danielle L Schmitt1, Yun-Ju Cheng1, Junyong Park1, Songon An1.   

Abstract

Dynamic partitioning of de novo purine biosynthetic enzymes into multienzyme compartments, purinosomes, has been associated with increased flux of de novo purine biosynthesis in human cells. However, we do not know of a mechanism by which de novo purine biosynthesis would be downregulated in cells. We have investigated the functional role of AMP-activated protein kinase (AMPK) in the regulation of de novo purine biosynthesis because of its regulatory action on lipid and carbohydrate biosynthetic pathways. Using pharmacological AMPK activators, we have monitored subcellular localizations of six pathway enzymes tagged with green fluorescent proteins under time-lapse fluorescence single-cell microscopy. We revealed that only one out of six pathway enzymes, formylglycinamidine ribonucleotide synthase (FGAMS), formed spatially distinct cytoplasmic granules after treatment with AMPK activators, indicating the formation of single-enzyme self-assemblies. In addition, subsequent biophysical studies using fluorescence recovery after photobleaching showed that the diffusion kinetics of FGAMS were slower when it localized inside the self-assemblies than within the purinosomes. Importantly, high-performance liquid chromatographic studies revealed that the formation of AMPK-promoted FGAMS self-assembly caused the reduction of purine metabolites in HeLa cells, indicating the downregulation of de novo purine biosynthesis. Collectively, we demonstrate here that the spatial sequestration of FGAMS by AMPK is a mechanism by which de novo purine biosynthesis is downregulated in human cells.

Entities:  

Mesh:

Substances:

Year:  2016        PMID: 27128383      PMCID: PMC5675104          DOI: 10.1021/acschembio.6b00039

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  37 in total

1.  Microtubule-assisted mechanism for functional metabolic macromolecular complex formation.

Authors:  Songon An; Yijun Deng; John W Tomsho; Minjoung Kyoung; Stephen J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-06       Impact factor: 11.205

2.  Widespread reorganization of metabolic enzymes into reversible assemblies upon nutrient starvation.

Authors:  Rammohan Narayanaswamy; Matthew Levy; Mark Tsechansky; Gwendolyn M Stovall; Jeremy D O'Connell; Jennifer Mirrielees; Andrew D Ellington; Edward M Marcotte
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-05       Impact factor: 11.205

3.  The generalisation of student's problems when several different population variances are involved.

Authors:  B L WELCH
Journal:  Biometrika       Date:  1947       Impact factor: 2.445

4.  mTORC1 induces purine synthesis through control of the mitochondrial tetrahydrofolate cycle.

Authors:  Issam Ben-Sahra; Gerta Hoxhaj; Stéphane J H Ricoult; John M Asara; Brendan D Manning
Journal:  Science       Date:  2016-02-12       Impact factor: 47.728

Review 5.  AMPK: a nutrient and energy sensor that maintains energy homeostasis.

Authors:  D Grahame Hardie; Fiona A Ross; Simon A Hawley
Journal:  Nat Rev Mol Cell Biol       Date:  2012-03-22       Impact factor: 94.444

6.  Discovery of 5-substituted pyrrolo[2,3-d]pyrimidine antifolates as dual-acting inhibitors of glycinamide ribonucleotide formyltransferase and 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase in de novo purine nucleotide biosynthesis: implications of inhibiting 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase to ampk activation and antitumor activity.

Authors:  Shermaine Mitchell-Ryan; Yiqiang Wang; Larry H Matherly; Aleem Gangjee; Sudhir Raghavan; Manasa Punaha Ravindra; Eric Hales; Steven Orr; Christina Cherian; Zhanjun Hou
Journal:  J Med Chem       Date:  2013-12-11       Impact factor: 7.446

7.  Quantitative analysis of purine nucleotides indicates that purinosomes increase de novo purine biosynthesis.

Authors:  Hong Zhao; Christopher R Chiaro; Limin Zhang; Philip B Smith; Chung Yu Chan; Anthony M Pedley; Raymond J Pugh; Jarrod B French; Andrew D Patterson; Stephen J Benkovic
Journal:  J Biol Chem       Date:  2015-01-20       Impact factor: 5.157

8.  Structural insight into AMPK regulation: ADP comes into play.

Authors:  Xiangshu Jin; Robert Townley; Lawrence Shapiro
Journal:  Structure       Date:  2007-10       Impact factor: 5.006

9.  AMPK Activation via Modulation of De Novo Purine Biosynthesis with an Inhibitor of ATIC Homodimerization.

Authors:  Daniel J Asby; Francesco Cuda; Maxime Beyaert; Franchesca D Houghton; Felino R Cagampang; Ali Tavassoli
Journal:  Chem Biol       Date:  2015-07-02

10.  Metabolomics Analysis Reveals that AICAR Affects Glycerolipid, Ceramide and Nucleotide Synthesis Pathways in INS-1 Cells.

Authors:  Mahmoud A ElAzzouny; Charles R Evans; Charles F Burant; Robert T Kennedy
Journal:  PLoS One       Date:  2015-06-24       Impact factor: 3.240

View more
  12 in total

1.  Regulation of reaction fluxes via enzyme sequestration and co-clustering.

Authors:  Florian Hinzpeter; Filipe Tostevin; Ulrich Gerland
Journal:  J R Soc Interface       Date:  2019-07-31       Impact factor: 4.118

Review 2.  Spatial Organization of Metabolic Enzyme Complexes in Cells.

Authors:  Danielle L Schmitt; Songon An
Journal:  Biochemistry       Date:  2017-06-16       Impact factor: 3.162

3.  The run-on oligomer filament enzyme mechanism of SgrAI: Part 1. Assembly kinetics of the run-on oligomer filament.

Authors:  Chad K Park; Jonathan L Sanchez; Claudia Barahona; L Emilia Basantes; Juan Sanchez; Christian Hernandez; N C Horton
Journal:  J Biol Chem       Date:  2018-08-01       Impact factor: 5.157

4.  The run-on oligomer filament enzyme mechanism of SgrAI: Part 2. Kinetic modeling of the full DNA cleavage pathway.

Authors:  Chad K Park; Jonathan L Sanchez; Claudia Barahona; L Emilia Basantes; Juan Sanchez; Christian Hernandez; N C Horton
Journal:  J Biol Chem       Date:  2018-07-27       Impact factor: 5.157

Review 5.  A New View into the Regulation of Purine Metabolism: The Purinosome.

Authors:  Anthony M Pedley; Stephen J Benkovic
Journal:  Trends Biochem Sci       Date:  2016-10-28       Impact factor: 13.807

Review 6.  Metabolic channeling: predictions, deductions, and evidence.

Authors:  Vidhi Pareek; Zhou Sha; Jingxuan He; Ned S Wingreen; Stephen J Benkovic
Journal:  Mol Cell       Date:  2021-09-16       Impact factor: 19.328

7.  ERK2 Phosphorylates PFAS to Mediate Posttranslational Control of De Novo Purine Synthesis.

Authors:  Eunus S Ali; Umakant Sahu; Elodie Villa; Brendan P O'Hara; Peng Gao; Cynthia Beaudet; Antony W Wood; John M Asara; Issam Ben-Sahra
Journal:  Mol Cell       Date:  2020-06-01       Impact factor: 17.970

8.  Expression of the purine biosynthetic enzyme phosphoribosyl formylglycinamidine synthase in neurons.

Authors:  Colleen A Mangold; Pamela J Yao; Mei Du; Willard M Freeman; Stephen J Benkovic; Moriah L Szpara
Journal:  J Neurochem       Date:  2018-03-26       Impact factor: 5.372

9.  Phase-separated condensates of metabolic complexes in living cells: Purinosome and glucosome.

Authors:  Songon An; Miji Jeon; Erin L Kennedy; Minjoung Kyoung
Journal:  Methods Enzymol       Date:  2019-07-09       Impact factor: 1.600

Review 10.  Human de novo purine biosynthesis.

Authors:  Vidhi Pareek; Anthony M Pedley; Stephen J Benkovic
Journal:  Crit Rev Biochem Mol Biol       Date:  2020-11-12       Impact factor: 8.250

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.