Literature DB >> 27122380

Clinical Evaluation of the New High-Throughput Luminex NxTAG Respiratory Pathogen Panel Assay for Multiplex Respiratory Pathogen Detection.

Jonathan H K Chen1, Ho-Yin Lam2, Cyril C Y Yip1, Sally C Y Wong1, Jasper F W Chan1,3,4, Edmond S K Ma2, Vincent C C Cheng1, Bone S F Tang2, Kwok-Yung Yuen5,3,4,6.   

Abstract

A broad range of viral and bacterial pathogens can cause acute respiratory tract infection. For rapid detection of a broad respiratory pathogen spectrum, multiplex real-time PCR is ideal. This study evaluated the performance of the new Luminex NxTAG Respiratory Pathogen Panel (NxTAG-RPP) in comparison with the BioFire FilmArray Respiratory Panel (FA-RP) or singleplex real-time PCR as reference. A total of 284 clinical respiratory specimens and 3 influenza A/H7N9 viral culture samples were tested. All clinical specimens were processed and analyzed in parallel using NxTAG-RPP and the reference standard method. The H7N9 viral culture samples were tested using NxTAG-RPP only. Overall, the NxTAG-RPP demonstrated ≥93% sensitivity and specificity for all respiratory targets except human coronavirus OC43 (HCoV-OC43) and HCoV-HKU1. The H7N9 virus was detected by the influenza A virus matrix gene target, while other influenza A virus subtyping gene targets in the panel remained negative. Complete concordance between NxTAG-RPP and FA-RP was observed in 98.8% (318/322) of positive results (kappa = 0.92). Substantial agreement was found for most respiratory targets, but significant differences were observed in human metapneumovirus (P = 0.001) and parainfluenza virus type 3 (P = 0.031). NxTAG-RPP has a higher sample throughput than FA-RP (96 samples versus 1 sample per run) while the turnaround times for NxTAG-RPP and FA-RP were 5 h (up to 96 samples) and 1 h (for one sample), respectively. Overall, NxTAG-RPP demonstrated good diagnostic performance for most respiratory pathogens. The high sample throughput with reasonable turnaround time of this new assay makes it a suitable multiplex platform for routine screening of respiratory specimens in hospital-based laboratories.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID: 27122380      PMCID: PMC4922091          DOI: 10.1128/JCM.00517-16

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  26 in total

1.  Comparison of the Luminex Respiratory Virus Panel fast assay with in-house real-time PCR for respiratory viral infection diagnosis.

Authors:  Naomi J Gadsby; Alison Hardie; Eric C J Claas; Kate E Templeton
Journal:  J Clin Microbiol       Date:  2010-03-31       Impact factor: 5.948

2.  Coronavirus HKU1 and other coronavirus infections in Hong Kong.

Authors:  Susanna K P Lau; Patrick C Y Woo; Cyril C Y Yip; Herman Tse; Hoi-wah Tsoi; Vincent C C Cheng; Paul Lee; Bone S F Tang; Chris H Y Cheung; Rodney A Lee; Lok-yee So; Yu-lung Lau; Kwok-hung Chan; Kwok-yung Yuen
Journal:  J Clin Microbiol       Date:  2006-06       Impact factor: 5.948

3.  Nosocomial lower respiratory tract infections: prevalence and risk factors in 14 Greek hospitals.

Authors:  D P Kofteridis; J A Papadakis; D Bouros; P Nikolaides; G Kioumis; S Levidiotou; E Maltezos; S Kastanakis; S Kartali; A Gikas
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2004-12       Impact factor: 3.267

4.  Comparison of the Biofire FilmArray RP, Genmark eSensor RVP, Luminex xTAG RVPv1, and Luminex xTAG RVP fast multiplex assays for detection of respiratory viruses.

Authors:  Elena B Popowitch; Stacey S O'Neill; Melissa B Miller
Journal:  J Clin Microbiol       Date:  2013-03-13       Impact factor: 5.948

5.  Pulmonary and extrapulmonary complications of human rhinovirus infection in critically ill patients.

Authors:  Kelvin K W To; Susanna K P Lau; Kwok-Hei Chan; Ka-Yi Mok; Hayes K H Luk; Cyril C Y Yip; Yat-Kwan Ma; Lorraine H Y Sinn; Sonia H Y Lam; Chun-Wai Ngai; Ivan F N Hung; Kwok-Hung Chan; Kwok-Yung Yuen
Journal:  J Clin Virol       Date:  2016-02-20       Impact factor: 3.168

6.  High morbidity and mortality in adults hospitalized for respiratory syncytial virus infections.

Authors:  N Lee; G C Y Lui; K T Wong; T C M Li; E C M Tse; J Y C Chan; J Yu; S S M Wong; K W Choi; R Y K Wong; K L K Ngai; D S C Hui; P K S Chan
Journal:  Clin Infect Dis       Date:  2013-07-21       Impact factor: 9.079

7.  Other respiratory viruses are important contributors to adult respiratory hospitalizations and mortality even during peak weeks of the influenza season.

Authors:  Rodica Gilca; Rachid Amini; Monique Douville-Fradet; Hugues Charest; Josée Dubuque; Nicole Boulianne; Danuta M Skowronski; Gaston De Serres
Journal:  Open Forum Infect Dis       Date:  2014-09-22       Impact factor: 3.835

8.  Comparing Luminex NxTAG-Respiratory Pathogen Panel and RespiFinder-22 for multiplex detection of respiratory pathogens.

Authors:  Christiane Beckmann; Hans H Hirsch
Journal:  J Med Virol       Date:  2016-02-18       Impact factor: 2.327

9.  Comparison of the conventional multiplex RT-PCR, real time RT-PCR and Luminex xTAG® RVP fast assay for the detection of respiratory viruses.

Authors:  Manohar L Choudhary; Siddharth P Anand; Shamal A Tikhe; Atul M Walimbe; Varsha A Potdar; Mandeep S Chadha; Akhilesh C Mishra
Journal:  J Med Virol       Date:  2016-01       Impact factor: 2.327

10.  Human bocavirus infection as a cause of severe acute respiratory tract infection in children.

Authors:  F M Moesker; J J A van Kampen; A A van der Eijk; A M C van Rossum; M de Hoog; M Schutten; S L Smits; R Bodewes; A D M E Osterhaus; P L A Fraaij
Journal:  Clin Microbiol Infect       Date:  2015-06-19       Impact factor: 8.067

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  28 in total

Review 1.  Syndromic Panel-Based Testing in Clinical Microbiology.

Authors:  Poornima Ramanan; Alexandra L Bryson; Matthew J Binnicker; Bobbi S Pritt; Robin Patel
Journal:  Clin Microbiol Rev       Date:  2017-11-15       Impact factor: 26.132

2.  Comparison of Unyvero P55 Pneumonia Cartridge, in-house PCR and culture for the identification of respiratory pathogens and antibiotic resistance in bronchoalveolar lavage fluids in the critical care setting.

Authors:  Naomi J Gadsby; Martin P McHugh; Callum Forbes; Laura MacKenzie; Stephen K D Hamilton; David M Griffith; Kate E Templeton
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2019-03-11       Impact factor: 3.267

3.  Performance Evaluation of Allplex Respiratory Panels 1, 2, and 3 for Detection of Respiratory Viruses and Influenza A Virus Subtypes.

Authors:  Hee Jae Huh; Ji-Youn Kim; Hyeon Jeong Kwon; Sun Ae Yun; Myoung-Keun Lee; Nam Yong Lee; Jong-Won Kim; Chang-Seok Ki
Journal:  J Clin Microbiol       Date:  2016-11-30       Impact factor: 5.948

4.  Practical Guidance for Clinical Microbiology Laboratories: Viruses Causing Acute Respiratory Tract Infections.

Authors:  Carmen L Charlton; Esther Babady; Christine C Ginocchio; Todd F Hatchette; Robert C Jerris; Yan Li; Mike Loeffelholz; Yvette S McCarter; Melissa B Miller; Susan Novak-Weekley; Audrey N Schuetz; Yi-Wei Tang; Ray Widen; Steven J Drews
Journal:  Clin Microbiol Rev       Date:  2018-12-12       Impact factor: 26.132

5.  Application of MRT-qPCR for pathogen detection of lower respiratory tract infection.

Authors:  Shiyi Huang; Jiangpo Chen; Jian Wang; Yuqi Zhao; Cong Jin; Yuxiang Wang; Mengmeng Lu; Wenxuan Wang; Qingzeng Qian; Tieliang Pang
Journal:  Am J Transl Res       Date:  2022-05-15       Impact factor: 3.940

6.  Comparison of NxTAG Respiratory Pathogen Panel and Anyplex II RV16 Tests for Multiplex Detection of Respiratory Pathogens in Hospitalized Children.

Authors:  Pedro Brotons; Desiree Henares; Irene Latorre; Antonio Cepillo; Cristian Launes; Carmen Muñoz-Almagro
Journal:  J Clin Microbiol       Date:  2016-09-14       Impact factor: 5.948

7.  Evaluation of Commercial Molecular Diagnostic Methods for Detection and Determination of Macrolide Resistance in Mycoplasma pneumoniae.

Authors:  Sixto M Leal; Arthur H Totten; Li Xiao; Donna M Crabb; Amy Ratliff; Lynn B Duffy; Karen B Fowler; Emily Mixon; Jonas M Winchell; Maureen H Diaz; Alvaro J Benitez; Bernard J Wolff; Xuan Qin; Y-W Tang; Mark Gonzalez; Raj Selvarangan; Tao Hong; Edward Brooks; Steve Dallas; T Prescott Atkinson; Xiaotian Zheng; Jennifer Dien Bard; Ken B Waites
Journal:  J Clin Microbiol       Date:  2020-05-26       Impact factor: 5.948

8.  Updates on Rapid Diagnostic Tests in Infectious Diseases.

Authors:  Masako Mizusawa
Journal:  Mo Med       Date:  2020 Jul-Aug

Review 9.  Syndromic Multiplex Polymerase Chain Reaction (mPCR) Testing and Antimicrobial Stewardship: Current Practice and Future Directions.

Authors:  Theodore S Rader; Michael P Stevens; Gonzalo Bearman
Journal:  Curr Infect Dis Rep       Date:  2021-02-26       Impact factor: 3.725

10.  Evaluation of the Luminex xTAG Respiratory Viral Panel FAST v2 assay for detection of multiple respiratory viral pathogens in nasal and throat swabs in Vietnam.

Authors:  Vu Thi Ty Hang; Nguyen Thi Han Ny; Tran My Phuc; Pham Thi Thanh Tam; Dang Thao Huong; Ho Dang Trung Nghia; Nguyen Tran Anh Vu; Pham Thi Hong Phuong; Nguyen Van Xang; Nguyen Dong; Pham Nhu Hiep; Nguyen Van Hung; Tran Tinh Hien; Maia Rabaa; Guy E Thwaites; Stephen Baker; Le Van Tan; H Rogier van Doorn
Journal:  Wellcome Open Res       Date:  2017-09-05
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