Literature DB >> 27097901

Extracellular voltage threshold settings can be tuned for optimal encoding of movement and stimulus parameters.

Emily R Oby1, Sagi Perel, Patrick T Sadtler, Douglas A Ruff, Jessica L Mischel, David F Montez, Marlene R Cohen, Aaron P Batista, Steven M Chase.   

Abstract

OBJECTIVE: A traditional goal of neural recording with extracellular electrodes is to isolate action potential waveforms of an individual neuron. Recently, in brain-computer interfaces (BCIs), it has been recognized that threshold crossing events of the voltage waveform also convey rich information. To date, the threshold for detecting threshold crossings has been selected to preserve single-neuron isolation. However, the optimal threshold for single-neuron identification is not necessarily the optimal threshold for information extraction. Here we introduce a procedure to determine the best threshold for extracting information from extracellular recordings. We apply this procedure in two distinct contexts: the encoding of kinematic parameters from neural activity in primary motor cortex (M1), and visual stimulus parameters from neural activity in primary visual cortex (V1). APPROACH: We record extracellularly from multi-electrode arrays implanted in M1 or V1 in monkeys. Then, we systematically sweep the voltage detection threshold and quantify the information conveyed by the corresponding threshold crossings. MAIN
RESULTS: The optimal threshold depends on the desired information. In M1, velocity is optimally encoded at higher thresholds than speed; in both cases the optimal thresholds are lower than are typically used in BCI applications. In V1, information about the orientation of a visual stimulus is optimally encoded at higher thresholds than is visual contrast. A conceptual model explains these results as a consequence of cortical topography. SIGNIFICANCE: How neural signals are processed impacts the information that can be extracted from them. Both the type and quality of information contained in threshold crossings depend on the threshold setting. There is more information available in these signals than is typically extracted. Adjusting the detection threshold to the parameter of interest in a BCI context should improve our ability to decode motor intent, and thus enhance BCI control. Further, by sweeping the detection threshold, one can gain insights into the topographic organization of the nearby neural tissue.

Entities:  

Mesh:

Year:  2016        PMID: 27097901      PMCID: PMC5931220          DOI: 10.1088/1741-2560/13/3/036009

Source DB:  PubMed          Journal:  J Neural Eng        ISSN: 1741-2552            Impact factor:   5.379


  36 in total

1.  Spike train decoding without spike sorting.

Authors:  Valérie Ventura
Journal:  Neural Comput       Date:  2008-04       Impact factor: 2.026

2.  Cues for sound localization are encoded in multiple aspects of spike trains in the inferior colliculus.

Authors:  Steven M Chase; Eric D Young
Journal:  J Neurophysiol       Date:  2008-01-30       Impact factor: 2.714

3.  Mapping of the preferred direction in the motor cortex.

Authors:  Apostolos P Georgopoulos; Hugo Merchant; Thomas Naselaris; Bagrat Amirikian
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-14       Impact factor: 11.205

4.  Cortical control of a prosthetic arm for self-feeding.

Authors:  Meel Velliste; Sagi Perel; M Chance Spalding; Andrew S Whitford; Andrew B Schwartz
Journal:  Nature       Date:  2008-05-28       Impact factor: 49.962

5.  How somatotopic is the motor cortex hand area?

Authors:  M H Schieber; L S Hibbard
Journal:  Science       Date:  1993-07-23       Impact factor: 47.728

6.  On the relations between the direction of two-dimensional arm movements and cell discharge in primate motor cortex.

Authors:  A P Georgopoulos; J F Kalaska; R Caminiti; J T Massey
Journal:  J Neurosci       Date:  1982-11       Impact factor: 6.167

7.  A brain-machine interface enables bimanual arm movements in monkeys.

Authors:  Peter J Ifft; Solaiman Shokur; Zheng Li; Mikhail A Lebedev; Miguel A L Nicolelis
Journal:  Sci Transl Med       Date:  2013-11-06       Impact factor: 17.956

8.  Bayesian decoding using unsorted spikes in the rat hippocampus.

Authors:  Fabian Kloosterman; Stuart P Layton; Zhe Chen; Matthew A Wilson
Journal:  J Neurophysiol       Date:  2013-10-02       Impact factor: 2.714

9.  How many neurons can we see with current spike sorting algorithms?

Authors:  Carlos Pedreira; Juan Martinez; Matias J Ison; Rodrigo Quian Quiroga
Journal:  J Neurosci Methods       Date:  2012-07-25       Impact factor: 2.390

10.  Neural constraints on learning.

Authors:  Patrick T Sadtler; Kristin M Quick; Matthew D Golub; Steven M Chase; Stephen I Ryu; Elizabeth C Tyler-Kabara; Byron M Yu; Aaron P Batista
Journal:  Nature       Date:  2014-08-28       Impact factor: 49.962

View more
  12 in total

1.  A neural network for online spike classification that improves decoding accuracy.

Authors:  Deepa Issar; Ryan C Williamson; Sanjeev B Khanna; Matthew A Smith
Journal:  J Neurophysiol       Date:  2020-02-26       Impact factor: 2.714

2.  Power-saving design opportunities for wireless intracortical brain-computer interfaces.

Authors:  Nir Even-Chen; Dante G Muratore; Sergey D Stavisky; Leigh R Hochberg; Jaimie M Henderson; Boris Murmann; Krishna V Shenoy
Journal:  Nat Biomed Eng       Date:  2020-08-03       Impact factor: 25.671

3.  Neural ensemble dynamics in dorsal motor cortex during speech in people with paralysis.

Authors:  Krishna V Shenoy; Jaimie M Henderson; Sergey D Stavisky; Francis R Willett; Guy H Wilson; Brian A Murphy; Paymon Rezaii; Donald T Avansino; William D Memberg; Jonathan P Miller; Robert F Kirsch; Leigh R Hochberg; A Bolu Ajiboye; Shaul Druckmann
Journal:  Elife       Date:  2019-12-10       Impact factor: 8.140

4.  Decoding spoken English from intracortical electrode arrays in dorsal precentral gyrus.

Authors:  Guy H Wilson; Sergey D Stavisky; Francis R Willett; Donald T Avansino; Jessica N Kelemen; Leigh R Hochberg; Jaimie M Henderson; Shaul Druckmann; Krishna V Shenoy
Journal:  J Neural Eng       Date:  2020-11-25       Impact factor: 5.379

5.  Temporally precise population coding of dynamic sounds by auditory cortex.

Authors:  Joshua D Downer; James Bigelow; Melissa J Runfeldt; Brian J Malone
Journal:  J Neurophysiol       Date:  2021-06-02       Impact factor: 2.974

6.  Cluster-based analysis improves predictive validity of spike-triggered receptive field estimates.

Authors:  James Bigelow; Brian J Malone
Journal:  PLoS One       Date:  2017-09-06       Impact factor: 3.240

7.  Watch, Imagine, Attempt: Motor Cortex Single-Unit Activity Reveals Context-Dependent Movement Encoding in Humans With Tetraplegia.

Authors:  Carlos E Vargas-Irwin; Jessica M Feldman; Brandon King; John D Simeral; Brittany L Sorice; Erin M Oakley; Sydney S Cash; Emad N Eskandar; Gerhard M Friehs; Leigh R Hochberg; John P Donoghue
Journal:  Front Hum Neurosci       Date:  2018-11-15       Impact factor: 3.169

8.  Neural Population Dynamics Underlying Motor Learning Transfer.

Authors:  Saurabh Vyas; Nir Even-Chen; Sergey D Stavisky; Stephen I Ryu; Paul Nuyujukian; Krishna V Shenoy
Journal:  Neuron       Date:  2018-02-15       Impact factor: 17.173

9.  Motor Cortical Visuomotor Feedback Activity Is Initially Isolated from Downstream Targets in Output-Null Neural State Space Dimensions.

Authors:  Sergey D Stavisky; Jonathan C Kao; Stephen I Ryu; Krishna V Shenoy
Journal:  Neuron       Date:  2017-06-15       Impact factor: 17.173

10.  Sums of Spike Waveform Features for Motor Decoding.

Authors:  Jie Li; Zheng Li
Journal:  Front Neurosci       Date:  2017-07-18       Impact factor: 4.677

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.