Literature DB >> 27096052

Design of Novel Aminoglycoside Derivatives with Enhanced Suppression of Diseases-Causing Nonsense Mutations.

Narayana Murthy Sabbavarapu1, Michal Shavit1, Yarden Degani1, Boris Smolkin1, Valery Belakhov1, Timor Baasov1.   

Abstract

New pseudotrisaccharide derivatives of aminoglycosides that exploit additional interaction on the shallow groove face of the decoding-site rRNA of eukaryotic ribosome were designed, synthesized and biologically evaluated. Novel lead structures (6 and 7 with an additional 7'-OH), exhibiting enhanced specificity to eukaryotic cytoplasmic ribosome, and superior nonsense mutation suppression activity than those of gentamicin, were discovered. The comparative benefit of new leads was demonstrated in four different nonsense DNA-constructs underling the genetic diseases cystic fibrosis, Usher syndrome, and Hurler syndrome.

Entities:  

Keywords:  Aminoglycosides; cystic fibrosis; genetic diseases; nonsense mutations; translational readthrough

Year:  2016        PMID: 27096052      PMCID: PMC4834649          DOI: 10.1021/acsmedchemlett.6b00006

Source DB:  PubMed          Journal:  ACS Med Chem Lett        ISSN: 1948-5875            Impact factor:   4.345


  18 in total

1.  Increased selectivity toward cytoplasmic versus mitochondrial ribosome confers improved efficiency of synthetic aminoglycosides in fixing damaged genes: a strategy for treatment of genetic diseases caused by nonsense mutations.

Authors:  Jeyakumar Kandasamy; Dana Atia-Glikin; Eli Shulman; Katya Shapira; Michal Shavit; Valery Belakhov; Timor Baasov
Journal:  J Med Chem       Date:  2012-11-29       Impact factor: 7.446

2.  When Proteins Start to Make Sense: Fine-tuning Aminoglycosides for PTC Suppression Therapy.

Authors:  Moran Shalev; Timor Baasov
Journal:  Medchemcomm       Date:  2014-08-01       Impact factor: 3.597

Review 3.  Aminoglycoside-induced translational read-through in disease: overcoming nonsense mutations by pharmacogenetic therapy.

Authors:  L V Zingman; S Park; T M Olson; A E Alekseev; A Terzic
Journal:  Clin Pharmacol Ther       Date:  2007-01       Impact factor: 6.875

4.  Synthetic aminoglycosides efficiently suppress cystic fibrosis transmembrane conductance regulator nonsense mutations and are enhanced by ivacaftor.

Authors:  Xiaojiao Xue; Venkateshwar Mutyam; Liping Tang; Silpak Biswas; Ming Du; Laura A Jackson; Yanying Dai; Valery Belakhov; Moran Shalev; Fuquan Chen; Jochen Schacht; Robert J Bridges; Timor Baasov; Jeong Hong; David M Bedwell; Steven M Rowe
Journal:  Am J Respir Cell Mol Biol       Date:  2014-04       Impact factor: 6.914

5.  Aminoglycoside antibiotics mediate context-dependent suppression of termination codons in a mammalian translation system.

Authors:  M Manuvakhova; K Keeling; D M Bedwell
Journal:  RNA       Date:  2000-07       Impact factor: 4.942

6.  Crystal structure of geneticin bound to a bacterial 16S ribosomal RNA A site oligonucleotide.

Authors:  Quentin Vicens; Eric Westhof
Journal:  J Mol Biol       Date:  2003-02-28       Impact factor: 5.469

7.  Repairing faulty genes by aminoglycosides: development of new derivatives of geneticin (G418) with enhanced suppression of diseases-causing nonsense mutations.

Authors:  Igor Nudelman; Dana Glikin; Boris Smolkin; Mariana Hainrichson; Valery Belakhov; Timor Baasov
Journal:  Bioorg Med Chem       Date:  2010-03-27       Impact factor: 3.641

8.  Designer aminoglycosides that selectively inhibit cytoplasmic rather than mitochondrial ribosomes show decreased ototoxicity: a strategy for the treatment of genetic diseases.

Authors:  Eli Shulman; Valery Belakhov; Gao Wei; Ann Kendall; Esther G Meyron-Holtz; Dorit Ben-Shachar; Jochen Schacht; Timor Baasov
Journal:  J Biol Chem       Date:  2013-12-03       Impact factor: 5.157

9.  Development of novel aminoglycoside (NB54) with reduced toxicity and enhanced suppression of disease-causing premature stop mutations.

Authors:  Igor Nudelman; Annie Rebibo-Sabbah; Marina Cherniavsky; Valery Belakhov; Mariana Hainrichson; Fuquan Chen; Jochen Schacht; Daniel S Pilch; Tamar Ben-Yosef; Timor Baasov
Journal:  J Med Chem       Date:  2009-05-14       Impact factor: 7.446

10.  Structural basis for selective targeting of leishmanial ribosomes: aminoglycoside derivatives as promising therapeutics.

Authors:  Moran Shalev; Haim Rozenberg; Boris Smolkin; Abedelmajeed Nasereddin; Dmitry Kopelyanskiy; Valery Belakhov; Thomas Schrepfer; Jochen Schacht; Charles L Jaffe; Noam Adir; Timor Baasov
Journal:  Nucleic Acids Res       Date:  2015-08-11       Impact factor: 16.971

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  16 in total

1.  Characterization of new-generation aminoglycoside promoting premature termination codon readthrough in cancer cells.

Authors:  Laure Bidou; Olivier Bugaud; Valery Belakhov; Timor Baasov; Olivier Namy
Journal:  RNA Biol       Date:  2017-02-01       Impact factor: 4.652

2.  Antimicrobial Activity, AME Resistance, and A-Site Binding Studies of Anthraquinone-Neomycin Conjugates.

Authors:  Natalya N Degtyareva; Changjun Gong; Sandra Story; Nathanael S Levinson; Adegboyega K Oyelere; Keith D Green; Sylvie Garneau-Tsodikova; Dev P Arya
Journal:  ACS Infect Dis       Date:  2017-02-17       Impact factor: 5.084

3.  Synthesis of Gentamicin Minor Components: Gentamicin B1 and Gentamicin X2.

Authors:  Parasuraman Rajasekaran; David Crich
Journal:  Org Lett       Date:  2020-04-28       Impact factor: 6.005

4.  Reducing the Toxicity of Designer Aminoglycosides as Nonsense Mutation Readthrough Agents for Therapeutic Targets.

Authors:  Michael Popadynec; Alireza Baradaran-Heravi; Benjamin Alford; Scott A Cameron; Keith Clinch; Jennifer M Mason; Phillip M Rendle; Olga V Zubkova; Zhonghong Gan; Hui Liu; Oscar Rebollo; Dennis M Whitfield; Fengyang Yan; Michel Roberge; David A Powell
Journal:  ACS Med Chem Lett       Date:  2021-08-09       Impact factor: 4.632

5.  Structure-Activity Relationship Study of Leucyl-3-epi-deoxynegamycin for Potent Premature Termination Codon Readthrough.

Authors:  Akihiro Taguchi; Keisuke Hamada; Masataka Shiozuka; Misaki Kobayashi; Saori Murakami; Kentaro Takayama; Atsuhiko Taniguchi; Takeo Usui; Ryoichi Matsuda; Yoshio Hayashi
Journal:  ACS Med Chem Lett       Date:  2017-09-29       Impact factor: 4.345

Review 6.  Pharmacological approaches for targeting cystic fibrosis nonsense mutations.

Authors:  Jyoti Sharma; Kim M Keeling; Steven M Rowe
Journal:  Eur J Med Chem       Date:  2020-05-21       Impact factor: 6.514

7.  Predictive Analysis of the Side Chain Conformation of the Higher Carbon Sugars: Application to the Preorganization of the Aminoglycoside Ring 1 Side Chain for Binding to the Bacterial Ribosomal Decoding A Site.

Authors:  Michael G Pirrone; Marina Gysin; Klara Haldimann; Sven N Hobbie; Andrea Vasella; David Crich
Journal:  J Org Chem       Date:  2020-09-23       Impact factor: 4.354

Review 8.  Cystic fibrosis transmembrane conductance regulator modulators in cystic fibrosis: current perspectives.

Authors:  Béla Z Schmidt; Jérémy B Haaf; Teresinha Leal; Sabrina Noel
Journal:  Clin Pharmacol       Date:  2016-09-21

9.  Nonsense Suppression as an Approach to Treat Lysosomal Storage Diseases.

Authors:  Kim M Keeling
Journal:  Diseases       Date:  2016-10-19

10.  Exploring eukaryotic versus prokaryotic ribosomal RNA recognition with aminoglycoside derivatives.

Authors:  Narayana Murthy Sabbavarapu; Tomasz Pieńko; Bat-Hen Zalman; Joanna Trylska; Timor Baasov
Journal:  Medchemcomm       Date:  2018-02-02       Impact factor: 3.597

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