Literature DB >> 27090931

Improving Viral Protease Inhibitors to Counter Drug Resistance.

Nese Kurt Yilmaz1, Ronald Swanstrom2, Celia A Schiffer3.   

Abstract

Drug resistance is a major problem in health care, undermining therapy outcomes and necessitating novel approaches to drug design. Extensive studies on resistance to viral protease inhibitors, particularly those of HIV-1 and hepatitis C virus (HCV) protease, revealed a plethora of information on the structural and molecular mechanisms underlying resistance. These insights led to several strategies to improve viral protease inhibitors to counter resistance, such as exploiting the essential biological function and leveraging evolutionary constraints. Incorporation of these strategies into structure-based drug design can minimize vulnerability to resistance, not only for viral proteases but for other quickly evolving drug targets as well, toward designing inhibitors one step ahead of evolution to counter resistance with more intelligent and rational design.
Copyright © 2016 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  HIV-1 protease; drug resistance; protease inhibitors; resistance mutations; structure-based drug design; substrate envelope

Mesh:

Substances:

Year:  2016        PMID: 27090931      PMCID: PMC4912444          DOI: 10.1016/j.tim.2016.03.010

Source DB:  PubMed          Journal:  Trends Microbiol        ISSN: 0966-842X            Impact factor:   17.079


  90 in total

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Authors:  Michael N Alekshun; Stuart B Levy
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3.  Structural basis and distal effects of Gag substrate coevolution in drug resistance to HIV-1 protease.

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4.  Structural and Thermodynamic Effects of Macrocyclization in HCV NS3/4A Inhibitor MK-5172.

Authors:  Djadé I Soumana; Nese Kurt Yilmaz; Kristina L Prachanronarong; Cihan Aydin; Akbar Ali; Celia A Schiffer
Journal:  ACS Chem Biol       Date:  2016-01-06       Impact factor: 5.100

5.  Curling of flap tips in HIV-1 protease as a mechanism for substrate entry and tolerance of drug resistance.

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7.  Cooperative effects of drug-resistance mutations in the flap region of HIV-1 protease.

Authors:  Jennifer E Foulkes-Murzycki; Christina Rosi; Nese Kurt Yilmaz; Robert W Shafer; Celia A Schiffer
Journal:  ACS Chem Biol       Date:  2012-12-27       Impact factor: 5.100

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Review 4.  Investigational protease inhibitors as antiretroviral therapies.

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6.  Genetic Paths to Evolutionary Rescue and the Distribution of Fitness Effects Along Them.

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7.  GRL-079, a Novel HIV-1 Protease Inhibitor, Is Extremely Potent against Multidrug-Resistant HIV-1 Variants and Has a High Genetic Barrier against the Emergence of Resistant Variants.

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8.  Catching a Moving Target: Comparative Modeling of Flaviviral NS2B-NS3 Reveals Small Molecule Zika Protease Inhibitors.

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9.  Effects of Hinge-region Natural Polymorphisms on Human Immunodeficiency Virus-Type 1 Protease Structure, Dynamics, and Drug Pressure Evolution.

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10.  Molecular Mechanism of Resistance in a Clinically Significant Double-Mutant Variant of HCV NS3/4A Protease.

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