Literature DB >> 21909106

Genome-wide association study identifies two susceptibility loci for exudative age-related macular degeneration in the Japanese population.

Satoshi Arakawa1, Atsushi Takahashi, Kyota Ashikawa, Naoya Hosono, Tomomi Aoi, Miho Yasuda, Yuji Oshima, Shigeo Yoshida, Hiroshi Enaida, Takashi Tsuchihashi, Keisuke Mori, Shigeru Honda, Akira Negi, Akira Arakawa, Kazuaki Kadonosono, Yutaka Kiyohara, Naoyuki Kamatani, Yusuke Nakamura, Tatsuro Ishibashi, Michiaki Kubo.   

Abstract

Age-related macular degeneration (AMD), the leading cause of irreversible blindness in the world, is a complex disease caused by multiple environmental and genetic risk factors. To identify genetic factors that modify the risk of exudative AMD in the Japanese population, we conducted a genome-wide association study and a replication study using a total of 1,536 individuals with exudative AMD and 18,894 controls. In addition to CFH (rs800292, P = 4.23 × 10(-15)) and ARMS2 (rs3750847, P = 8.67 × 10(-29)) loci, we identified two new susceptibility loci for exudative AMD: TNFRSF10A-LOC389641 on chromosome 8p21 (rs13278062, combined P = 1.03 × 10(-12), odds ratio = 0.73) and REST-C4orf14-POLR2B-IGFBP7 on chromosome 4q12 (rs1713985, combined P = 2.34 × 10(-8), odds ratio = 1.30). Fine mapping revealed that rs13278062, which is known to alter TNFRSF10A transcriptional activity, had the most significant association in 8p21 region. Our results provide new insights into the pathophysiology of exudative AMD.

Entities:  

Mesh:

Year:  2011        PMID: 21909106     DOI: 10.1038/ng.938

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  35 in total

1.  A high-throughput SNP typing system for genome-wide association studies.

Authors:  Y Ohnishi; T Tanaka; K Ozaki; R Yamada; H Suzuki; Y Nakamura
Journal:  J Hum Genet       Date:  2001       Impact factor: 3.172

Review 2.  The prevalence of age-related macular degeneration in Asians: a systematic review and meta-analysis.

Authors:  Ryo Kawasaki; Miho Yasuda; Su Jeong Song; Shih-Jen Chen; Jost B Jonas; Jie Jin Wang; Paul Mitchell; Tien Y Wong
Journal:  Ophthalmology       Date:  2010-01-27       Impact factor: 12.079

Review 3.  The natural history and prognosis of neovascular age-related macular degeneration: a systematic review of the literature and meta-analysis.

Authors:  Tien Y Wong; Tien Wong; Usha Chakravarthy; Ronald Klein; Paul Mitchell; Gergana Zlateva; Ronald Buggage; Kyle Fahrbach; Corey Probst; Isabella Sledge
Journal:  Ophthalmology       Date:  2007-08-06       Impact factor: 12.079

Review 4.  The BioBank Japan Project.

Authors:  Yusuke Nakamura
Journal:  Clin Adv Hematol Oncol       Date:  2007-09

5.  Report on the nationwide epidemiological survey of exudative age-related macular degeneration in Japan.

Authors:  M Yuzawa; A Tamakoshi; T Kawamura; Y Ohno; M Uyama; T Honda
Journal:  Int Ophthalmol       Date:  1997       Impact factor: 2.031

6.  An imbalance of human complement regulatory proteins CFHR1, CFHR3 and factor H influences risk for age-related macular degeneration (AMD).

Authors:  Lars G Fritsche; Nadine Lauer; Andrea Hartmann; Selina Stippa; Claudia N Keilhauer; Martin Oppermann; Manoj K Pandey; Jörg Köhl; Peter F Zipfel; Bernhard H F Weber; Christine Skerka
Journal:  Hum Mol Genet       Date:  2010-09-15       Impact factor: 6.150

7.  Transcriptome analysis and molecular signature of human retinal pigment epithelium.

Authors:  N V Strunnikova; A Maminishkis; J J Barb; F Wang; C Zhi; Y Sergeev; W Chen; A O Edwards; D Stambolian; G Abecasis; A Swaroop; P J Munson; S S Miller
Journal:  Hum Mol Genet       Date:  2010-04-01       Impact factor: 6.150

8.  C3 R102G polymorphism increases risk of age-related macular degeneration.

Authors:  Kylee L Spencer; Lana M Olson; Brent M Anderson; Nathalie Schnetz-Boutaud; William K Scott; Paul Gallins; Anita Agarwal; Eric A Postel; Margaret A Pericak-Vance; Jonathan L Haines
Journal:  Hum Mol Genet       Date:  2008-03-06       Impact factor: 6.150

9.  Distinct signature of altered homeostasis in aging rod photoreceptors: implications for retinal diseases.

Authors:  Sunil K Parapuram; Radu I Cojocaru; Jessica R Chang; Ritu Khanna; Matthew Brooks; Mohammad Othman; Sepideh Zareparsi; Naheed W Khan; Norimoto Gotoh; Tiziana Cogliati; Anand Swaroop
Journal:  PLoS One       Date:  2010-11-08       Impact factor: 3.240

10.  Genome-wide association identifies SKIV2L and MYRIP as protective factors for age-related macular degeneration.

Authors:  L J Kopplin; R P Igo; Y Wang; T A Sivakumaran; S A Hagstrom; N S Peachey; P J Francis; M L Klein; J P SanGiovanni; E Y Chew; G J T Pauer; G M Sturgill; T Joshi; L Tian; Q Xi; A K Henning; K E Lee; R Klein; B E K Klein; S K Iyengar
Journal:  Genes Immun       Date:  2010-09-23       Impact factor: 2.676

View more
  65 in total

Review 1.  Emerging roles for nuclear receptors in the pathogenesis of age-related macular degeneration.

Authors:  Goldis Malek; Eleonora M Lad
Journal:  Cell Mol Life Sci       Date:  2014-08-26       Impact factor: 9.261

2.  Gene-gene interaction of CFH, ARMS2, and ARMS2/HTRA1 on the risk of neovascular age-related macular degeneration and polypoidal choroidal vasculopathy in Chinese population.

Authors:  L Huang; Q Meng; C Zhang; Y Sun; Y Bai; S Li; X Deng; B Wang; W Yu; M Zhao; X Li
Journal:  Eye (Lond)       Date:  2015-03-13       Impact factor: 3.775

3.  Genetic determinants of age-related macular degeneration in diverse populations from the PAGE study.

Authors:  Nicole A Restrepo; Kylee L Spencer; Robert Goodloe; Tiana A Garrett; Gerardo Heiss; Petra Bůžková; Neal Jorgensen; Richard A Jensen; Tara C Matise; Lucia A Hindorff; Barbara E K Klein; Ronald Klein; Tien Y Wong; Ching-Yu Cheng; Belinda K Cornes; E-Shyong Tai; Marylyn D Ritchie; Jonathan L Haines; Dana C Crawford
Journal:  Invest Ophthalmol Vis Sci       Date:  2014-09-09       Impact factor: 4.799

Review 4.  Risk factors and biomarkers of age-related macular degeneration.

Authors:  Nathan G Lambert; Hanan ElShelmani; Malkit K Singh; Fiona C Mansergh; Michael A Wride; Maximilian Padilla; David Keegan; Ruth E Hogg; Balamurali K Ambati
Journal:  Prog Retin Eye Res       Date:  2016-05-06       Impact factor: 21.198

5.  Genetic risk, ethnic variations and pharmacogenetic biomarkers in age-related macular degeneration and polypoidal choroidal vasculopathy.

Authors:  Jane Z Kuo; Tien Y Wong; Frank S Ong
Journal:  Expert Rev Ophthalmol       Date:  2013-04-01

6.  A missense variant in FGD6 confers increased risk of polypoidal choroidal vasculopathy.

Authors:  Lulin Huang; Houbin Zhang; Ching-Yu Cheng; Feng Wen; Pancy O S Tam; Peiquan Zhao; Haoyu Chen; Zheng Li; Lijia Chen; Zhengfu Tai; Kenji Yamashiro; Shaoping Deng; Xianjun Zhu; Weiqi Chen; Li Cai; Fang Lu; Yuanfeng Li; Chui-Ming G Cheung; Yi Shi; Masahiro Miyake; Yin Lin; Bo Gong; Xiaoqi Liu; Kar-Seng Sim; Jiyun Yang; Keisuke Mori; Xiongzhe Zhang; Peter D Cackett; Motokazu Tsujikawa; Kohji Nishida; Fang Hao; Shi Ma; He Lin; Jing Cheng; Ping Fei; Timothy Y Y Lai; Sibo Tang; Augustinus Laude; Satoshi Inoue; Ian Y Yeo; Yoichi Sakurada; Yu Zhou; Hiroyuki Iijima; Shigeru Honda; Chuntao Lei; Lin Zhang; Hong Zheng; Dan Jiang; Xiong Zhu; Tien-Ying Wong; Chiea-Chuen Khor; Chi-Pui Pang; Nagahisa Yoshimura; Zhenglin Yang
Journal:  Nat Genet       Date:  2016-04-18       Impact factor: 38.330

7.  Programmed necrosis, not apoptosis, is a key mediator of cell loss and DAMP-mediated inflammation in dsRNA-induced retinal degeneration.

Authors:  Y Murakami; H Matsumoto; M Roh; A Giani; K Kataoka; Y Morizane; M Kayama; A Thanos; S Nakatake; S Notomi; T Hisatomi; Y Ikeda; T Ishibashi; K M Connor; J W Miller; D G Vavvas
Journal:  Cell Death Differ       Date:  2013-08-16       Impact factor: 15.828

8.  Search for age-related macular degeneration risk variants in Alzheimer disease genes and pathways.

Authors:  Mark W Logue; Matthew Schu; Badri N Vardarajan; John Farrell; Kathryn L Lunetta; Gyungah Jun; Clinton T Baldwin; Margaret M Deangelis; Lindsay A Farrer
Journal:  Neurobiol Aging       Date:  2013-12-19       Impact factor: 4.673

Review 9.  Immunology of age-related macular degeneration.

Authors:  Jayakrishna Ambati; John P Atkinson; Bradley D Gelfand
Journal:  Nat Rev Immunol       Date:  2013-06       Impact factor: 53.106

10.  Complement factor H R1210C among Japanese patients with age-related macular degeneration.

Authors:  Masahiro Miyake; Masaaki Saito; Kenji Yamashiro; Tetsuju Sekiryu; Nagahisa Yoshimura
Journal:  Jpn J Ophthalmol       Date:  2015-07-28       Impact factor: 2.447

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.