Literature DB >> 27076660

Comparison of Matrix-Based and Filter Paper-Based Systems for Transport of Plasma for HIV-1 RNA Quantification and Amplicon Preparation for Genotyping.

Molly Levine1, Ingrid Beck1, Sheila Styrchak1, Gregory Pepper2, Lisa Frenkel3,2.   

Abstract

Two ambient-temperature, dry plasma transport systems, ViveST tubes and RNASound RNA sampling cards, and two extraction methods were compared to frozen plasma for HIV-1 RNA recovery. Significant RNA loss occurred: ViveST+MiniMag > ViveST+QIAamp > RNASound+QIAamp. RNA loss and low specimen volumes may affect the sensitivity of genotyping specimens with HIV-1 RNA of <4.70 log10 copies/ml.
Copyright © 2016, American Society for Microbiology. All Rights Reserved.

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Year:  2016        PMID： 27076660      PMCID： PMC4922083          DOI： 10.1128/JCM.00541-16

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN： 0095-1137            Impact factor:   5.948


  10 in total

1.  Update on Department of Health and Human Services guidelines for the use of antiretroviral agents in HIV-infected adults and adolescents.

Authors:  J G Bartlett
Journal:  Hopkins HIV Rep       Date:  1999-07

2.  Comparative effectiveness of dried plasma HIV-1 viral load testing in Brazil using ViveST for sample collection.

Authors:  Michelle Zanoni; Rodrigo Cortes; Ricardo S Diaz; M Cecilia Sucupira; Denise Ferreira; Lilian A Inocencio; Cintia Vilhena; Clive Loveday; R M Lloyd; M Holodniy
Journal:  J Clin Virol       Date:  2010-09-29       Impact factor: 3.168

3.  High concordance between HIV-1 drug resistance genotypes generated from plasma and dried blood spots in antiretroviral-experienced patients.

Authors:  Silvina Masciotra; Carolina Garrido; Ae S Youngpairoj; Amanda McNulty; Natalia Zahonero; Angelica Corral; Walid Heneine; Carmen de Mendoza; J Gerardo García-Lerma
Journal:  AIDS       Date:  2007-11-30       Impact factor: 4.177

4.  HIV-1 drug resistance surveillance using dried whole blood spots.

Authors:  Silvia Bertagnolio; Luis Soto-Ramirez; Richard Pilon; Roberto Rodriguez; Monica Viveros; Luis Fuentes; P Richard Harrigan; Theresa Mo; Don Sutherland; Paul Sandstrom
Journal:  Antivir Ther       Date:  2007

5.  Evaluation of a dried blood and plasma collection device, SampleTanker(®), for HIV type 1 drug resistance genotyping in patients receiving antiretroviral therapy.

Authors:  Karidia Diallo; Erica Lehotzky; Jing Zhang; Zhiyong Zhou; Ivette Lorenzana de Rivera; Wendy E Murillo; John Nkengasong; Jennifer Sabatier; Guoqing Zhang; Chunfu Yang
Journal:  AIDS Res Hum Retroviruses       Date:  2013-08-14       Impact factor: 2.205

6.  A sensitive genotyping assay for detection of drug resistance mutations in reverse transcriptase of HIV-1 subtypes B and C in samples stored as dried blood spots or frozen RNA extracts.

Authors:  Carrie Ziemniak; Allison George-Agwu; William J Moss; Stuart C Ray; Deborah Persaud
Journal:  J Virol Methods       Date:  2006-07-07       Impact factor: 2.014

7.  Dried blood spot specimens are a suitable alternative sample type for HIV-1 viral load measurement and drug resistance genotyping in patients receiving first-line antiretroviral therapy.

Authors:  Erin K Rottinghaus; Richard Ugbena; Karidia Diallo; Orji Bassey; Aderemi Azeez; Joshua Devos; Guoqing Zhang; John Aberle-Grasse; John Nkengasong; Chunfu Yang
Journal:  Clin Infect Dis       Date:  2012-03-12       Impact factor: 9.079

8.  Maternal HIV-1 DNA load and mother-to-child transmission.

Authors:  Nils D Arvold; Nicole Ngo-Giang-Huong; Kenneth McIntosh; Veera Suraseranivong; Boonyarat Warachit; Surachai Piyaworawong; Tikamporn Changchit; Marc Lallemant; Gonzague Jourdain
Journal:  AIDS Patient Care STDS       Date:  2007-09       Impact factor: 5.078

9.  Dried-plasma transport using a novel matrix and collection system for human immunodeficiency virus and hepatitis C virus virologic testing.

Authors:  R M Lloyd; D A Burns; J T Huong; R L Mathis; M A Winters; M Tanner; A De La Rosa; B Yen-Lieberman; W Armstrong; A Taege; D R McClernon; J L Wetshtein; Brian M Friedrich; Monique R Ferguson; William O'Brien; P M Feorino; M Holodniy
Journal:  J Clin Microbiol       Date:  2009-03-25       Impact factor: 5.948

10.  Field study of dried blood spot specimens for HIV-1 drug resistance genotyping.

Authors:  C M Parry; N Parkin; K Diallo; S Mwebaza; R Batamwita; J DeVos; N Bbosa; F Lyagoba; B Magambo; M R Jordan; R Downing; G Zhang; P Kaleebu; C Yang; S Bertagnolio
Journal:  J Clin Microbiol       Date:  2014-05-28       Impact factor: 5.948
  10 in total
  4 in total

1.  Maternal Human Immunodeficiency Virus (HIV) Drug Resistance Is Associated With Vertical Transmission and Is Prevalent in Infected Infants.

Authors:  Ceejay L Boyce; Tatiana Sils; Daisy Ko; Annie Wong-On-Wing; Ingrid A Beck; Sheila M Styrchak; Patricia DeMarrais; Camlin Tierney; Lynda Stranix-Chibanda; Patricia M Flynn; Taha E Taha; Maxensia Owor; Mary Glenn Fowler; Lisa M Frenkel
Journal:  Clin Infect Dis       Date:  2022-06-10       Impact factor: 20.999

2.  Assessment of the RNASound RNA Sampling Card for the Preservation of Influenza Virus RNA.

Authors:  Hilda Lau; Aeron C Hurt
Journal:  Front Microbiol       Date:  2016-11-02       Impact factor: 5.640

Review 3.  Dried Blood Spots for Global Health Diagnostics and Surveillance: Opportunities and Challenges.

Authors:  Mark D Lim
Journal:  Am J Trop Med Hyg       Date:  2018-06-28       Impact factor: 2.345

4.  Diagnostic Accuracy of Dried Plasma Spot Specimens for HIV-1 Viral Load Testing: A Systematic Review and Meta-analysis.

Authors:  Youyi Fong; Jessica Markby; Mauro Andreotti; Ingrid Beck; Thomas Bourlet; Don Brambilla; Lisa Frenkel; Rosalia Lira; Julie A E Nelson; Georgios Pollakis; Sandrine Reigadas; Douglas Richman; Souleymane Sawadogo; Laura Waters; Chunfu Yang; Clement Zeh; Meg Doherty; Lara Vojnov
Journal:  J Acquir Immune Defic Syndr       Date:  2022-03-01       Impact factor: 3.771
  4 in total

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