Literature DB >> 20880740

Comparative effectiveness of dried plasma HIV-1 viral load testing in Brazil using ViveST for sample collection.

Michelle Zanoni1, Rodrigo Cortes, Ricardo S Diaz, M Cecilia Sucupira, Denise Ferreira, Lilian A Inocencio, Cintia Vilhena, Clive Loveday, R M Lloyd, M Holodniy.   

Abstract

BACKGROUND: Utilization of dried plasma for HIV-1 viral load testing would significantly decrease sample shipping costs.
OBJECTIVES: To describe the precision and reproducibility of ViveST(®) (ST) as a transportation method for shipping specimens for HIV-1 viral load (VL) testing. STUDY
DESIGN: Thirty clinical plasma samples were used to generate replicate samples with HIV VL values of 4 log(10), 3 log(10) and 2 log(10) copies/mL for reproducibility testing and an additional 299 samples with HIV VL <50 copies/mL (99); 1.7 log(10) to 3.99 log(10) (100); and 4 log(10) to 5.99 log(10)/mL (100) were used to compare ViveST to frozen plasma samples using the VERSANT(®) HIV-1 RNA 3.0 Assay. Results were compared using Student t-test, Pearson correlation and Bland-Altman analyses.
RESULTS: Mean intra-assay variance among frozen and dried plasma triplicates was 0.15 log(10) and 0.09 log(10) copies/mL respectively (n=10, P=NS). Compared to frozen plasma, there was a mean reduction of 0.3 log(10), 0.27 log(10), and 0.35 log(10) copies/mL at the 4 log(10), 3 log(10), and 2 log(10) copy/mL samples respectively (n=30, all comparisons, P<0.01). Overall correlation between 299 frozen and ViveST samples was r=0.97, where 12 of 99 undetectable frozen VL were positive with ST, and 12 of 200 frozen detectable VL were undetectable with ViveST (mean VL 2.1, 1.9 log(10) copies/mL respectively).
CONCLUSIONS: HIV-1 viral load results using ViveST were reproducible, correlated well with frozen plasma, though yielding minimally lower values. Our data suggest that dried plasma for HIV-1 VL testing using ViveST has promise for use in HIV clinical practice. Published by Elsevier B.V.

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Year:  2010        PMID: 20880740     DOI: 10.1016/j.jcv.2010.08.017

Source DB:  PubMed          Journal:  J Clin Virol        ISSN: 1386-6532            Impact factor:   3.168


  8 in total

1.  Comparative effectiveness of dried-plasma hepatitis B virus viral load (VL) testing in three different VL commercial platforms using ViveST for sample collection.

Authors:  Michelle Zanoni; Leila B Giron; Cintia Vilhena; Maria Cecilia Sucupira; Robert M Lloyd; Ricardo Sobhie Diaz
Journal:  J Clin Microbiol       Date:  2011-10-19       Impact factor: 5.948

2.  Comparison of Matrix-Based and Filter Paper-Based Systems for Transport of Plasma for HIV-1 RNA Quantification and Amplicon Preparation for Genotyping.

Authors:  Molly Levine; Ingrid Beck; Sheila Styrchak; Gregory Pepper; Lisa Frenkel
Journal:  J Clin Microbiol       Date:  2016-04-13       Impact factor: 5.948

3.  Post-extraction stabilization of HIV viral RNA for quantitative molecular tests.

Authors:  Daniel S Stevens; Christopher H Crudder; Gonzalo J Domingo
Journal:  J Virol Methods       Date:  2012-03-13       Impact factor: 2.014

4.  Evaluation of nucleic acid stabilization products for ambient temperature shipping and storage of viral RNA and antibody in a dried whole blood format.

Authors:  Allison L Dauner; Theron C Gilliland; Indrani Mitra; Subhamoy Pal; Amy C Morrison; Robert D Hontz; Shuenn-Jue L Wu
Journal:  Am J Trop Med Hyg       Date:  2015-05-04       Impact factor: 2.345

5.  Recovery of live virus after storage at ambient temperature using ViveST™.

Authors:  Kelli L Barr; Ali M Messenger; Benjamin D Anderson; John A Friary; Gary L Heil; Kristy Reece; Gregory C Gray
Journal:  J Clin Virol       Date:  2012-10-06       Impact factor: 3.168

6.  HIV diversity and drug resistance from plasma and non-plasma analytes in a large treatment programme in western Kenya.

Authors:  Rami Kantor; Allison DeLong; Maya Balamane; Leeann Schreier; Robert M Lloyd; Wilfred Injera; Lydia Kamle; Fidelis Mambo; Sarah Muyonga; David Katzenstein; Joseph Hogan; Nathan Buziba; Lameck Diero
Journal:  J Int AIDS Soc       Date:  2014-11-18       Impact factor: 5.396

7.  Use of dried clinical samples for storing and detecting influenza RNA.

Authors:  Mark Winters; Robert Lloyd; Azra Shahidi; Sheldon Brown; Mark Holodniy
Journal:  Influenza Other Respir Viruses       Date:  2011-04-18       Impact factor: 4.380

Review 8.  Overview of the Analytes Applied in Genotypic HIV Drug Resistance Testing.

Authors:  Hezhao Ji; Paul Sandstrom
Journal:  Pathogens       Date:  2022-06-29
  8 in total

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