Literature DB >> 27070185

Reagentless, Structure-Switching, Electrochemical Aptamer-Based Sensors.

Lauren R Schoukroun-Barnes1, Florika C Macazo1, Brenda Gutierrez1, Justine Lottermoser1, Juan Liu1, Ryan J White1.   

Abstract

The development of structure-switching, electrochemical, aptamer-based sensors over the past ∼10 years has led to a variety of reagentless sensors capable of analytical detection in a range of sample matrices. The crux of this methodology is the coupling of target-induced conformation changes of a redox-labeled aptamer with electrochemical detection of the resulting altered charge transfer rate between the redox molecule and electrode surface. Using aptamer recognition expands the highly sensitive detection ability of electrochemistry to a range of previously inaccessible analytes. In this review, we focus on the methods of sensor fabrication and how sensor signaling is affected by fabrication parameters. We then discuss recent studies addressing the fundamentals of sensor signaling as well as quantitative characterization of the analytical performance of electrochemical aptamer-based sensors. Although the limits of detection of reported electrochemical aptamer-based sensors do not often reach that of gold-standard methods such as enzyme-linked immunosorbent assays, the operational convenience of the sensor platform enables exciting analytical applications that we address. Using illustrative examples, we highlight recent advances in the field that impact important areas of analytical chemistry. Finally, we discuss the challenges and prospects for this class of sensors.

Entities:  

Keywords:  binding affinity; biosensor; charge transfer; functional nucleic acid; monolayers

Year:  2016        PMID: 27070185      PMCID: PMC5627773          DOI: 10.1146/annurev-anchem-071015-041446

Source DB:  PubMed          Journal:  Annu Rev Anal Chem (Palo Alto Calif)        ISSN: 1936-1327            Impact factor:   10.745


  74 in total

1.  Label-free electronic detection of thrombin in blood serum by using an aptamer-based sensor.

Authors:  Yi Xiao; Arica A Lubin; Alan J Heeger; Kevin W Plaxco
Journal:  Angew Chem Int Ed Engl       Date:  2005-08-26       Impact factor: 15.336

2.  Solution structure of the tobramycin-RNA aptamer complex.

Authors:  L Jiang; D J Patel
Journal:  Nat Struct Biol       Date:  1998-09

3.  Using reliability information to annotate RNA secondary structures.

Authors:  M Zuker; A B Jacobson
Journal:  RNA       Date:  1998-06       Impact factor: 4.942

4.  Heterogeneous Electrochemical Aptamer-Based Sensor Surfaces for Controlled Sensor Response.

Authors:  Lauren R Schoukroun-Barnes; Ethan P Glaser; Ryan J White
Journal:  Langmuir       Date:  2015-06-02       Impact factor: 3.882

5.  A universal strategy for aptamer-based nanopore sensing through host-guest interactions inside α-hemolysin.

Authors:  Ting Li; Lei Liu; Yuru Li; Jiani Xie; Hai-Chen Wu
Journal:  Angew Chem Int Ed Engl       Date:  2015-05-12       Impact factor: 15.336

6.  Comprehensive analytical comparison of strategies used for small molecule aptamer evaluation.

Authors:  Maureen McKeague; Annalisa De Girolamo; Stefania Valenzano; Michelangelo Pascale; Annamaria Ruscito; Ranganathan Velu; Nadine R Frost; Kayla Hill; McKenzie Smith; Erin M McConnell; Maria C DeRosa
Journal:  Anal Chem       Date:  2015-08-15       Impact factor: 6.986

7.  On the Signaling of Electrochemical Aptamer-Based Sensors: Collision- and Folding-Based Mechanisms.

Authors:  Yi Xiao; Takanori Uzawa; Ryan J White; Daniel Demartini; Kevin W Plaxco
Journal:  Electroanalysis       Date:  2009-06-01       Impact factor: 3.223

8.  Reagentless measurement of aminoglycoside antibiotics in blood serum via an electrochemical, ribonucleic acid aptamer-based biosensor.

Authors:  Aaron A Rowe; Erin A Miller; Kevin W Plaxco
Journal:  Anal Chem       Date:  2010-09-01       Impact factor: 6.986

9.  DNA electrochemistry with tethered methylene blue.

Authors:  Catrina G Pheeney; Jacqueline K Barton
Journal:  Langmuir       Date:  2012-04-18       Impact factor: 3.882

10.  High specificity, electrochemical sandwich assays based on single aptamer sequences and suitable for the direct detection of small-molecule targets in blood and other complex matrices.

Authors:  Xiaolei Zuo; Yi Xiao; Kevin W Plaxco
Journal:  J Am Chem Soc       Date:  2009-05-27       Impact factor: 15.419

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  25 in total

1.  An electrochemical scaffold sensor for rapid syphilis diagnosis.

Authors:  Nathan E Ogden; Martin Kurnik; Claudio Parolo; Kevin W Plaxco
Journal:  Analyst       Date:  2019-08-16       Impact factor: 4.616

2.  Development of an Electrochemical Paper-Based Analytical Device for Trace Detection of Virus Particles.

Authors:  Robert B Channon; Yuanyuan Yang; Kristen M Feibelman; Brian J Geiss; David S Dandy; Charles S Henry
Journal:  Anal Chem       Date:  2018-06-01       Impact factor: 6.986

3.  Collagen Membranes with Ribonuclease Inhibitors for Long-Term Stability of Electrochemical Aptamer-Based Sensors Employing RNA.

Authors:  Mirelis Santos-Cancel; Ryan J White
Journal:  Anal Chem       Date:  2017-05-03       Impact factor: 6.986

4.  Immobilization Strategies for Enhancing Sensitivity of Electrochemical Aptamer-Based Sensors.

Authors:  Yingzhu Liu; Juan Canoura; Obtin Alkhamis; Yi Xiao
Journal:  ACS Appl Mater Interfaces       Date:  2021-01-15       Impact factor: 9.229

5.  Direct, Real-Time Detection of Adenosine Triphosphate Release from Astrocytes in Three-Dimensional Culture Using an Integrated Electrochemical Aptamer-Based Sensor.

Authors:  Mirelis Santos-Cancel; Laura W Simpson; Jennie B Leach; Ryan J White
Journal:  ACS Chem Neurosci       Date:  2019-02-20       Impact factor: 4.418

6.  An electrochemical aptamer-based sensor for the rapid and convenient measurement of L-tryptophan.

Authors:  Andrea Idili; Julian Gerson; Claudio Parolo; Tod Kippin; Kevin W Plaxco
Journal:  Anal Bioanal Chem       Date:  2019-02-22       Impact factor: 4.142

7.  Maximizing the Signal Gain of Electrochemical-DNA Sensors.

Authors:  Philippe Dauphin-Ducharme; Kevin W Plaxco
Journal:  Anal Chem       Date:  2016-11-22       Impact factor: 6.986

8.  Simulation-Based Approach to Determining Electron Transfer Rates Using Square-Wave Voltammetry.

Authors:  Philippe Dauphin-Ducharme; Netzahualcóyotl Arroyo-Currás; Martin Kurnik; Gabriel Ortega; Hui Li; Kevin W Plaxco
Journal:  Langmuir       Date:  2017-04-26       Impact factor: 3.882

9.  Rapid Two-Millisecond Interrogation of Electrochemical, Aptamer-Based Sensor Response Using Intermittent Pulse Amperometry.

Authors:  Mirelis Santos-Cancel; Robert A Lazenby; Ryan J White
Journal:  ACS Sens       Date:  2018-05-24       Impact factor: 7.711

10.  Electrochemical Studies of Cation Condensation-Induced Collapse of Surface-Bound DNA.

Authors:  Kiana S Sykes; Luiz F L Oliveira; George Stan; Ryan J White
Journal:  Langmuir       Date:  2019-09-25       Impact factor: 3.882

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