Literature DB >> 26005758

Heterogeneous Electrochemical Aptamer-Based Sensor Surfaces for Controlled Sensor Response.

Lauren R Schoukroun-Barnes1, Ethan P Glaser1, Ryan J White1.   

Abstract

Structure-switching sensors utilize recognition elements that undergo a conformation change upon target binding that is converted into a quantitative signal. Electrochemical, aptamer-based sensors achieve detection of analytes through a conformation change in an electrode-bound, oligonucleotide aptamer by measuring changes in electron transfer efficiencies. The analytical performance of these sensors is related to the magnitude of the conformation change of the aptamer. The goal of the present work is to develop a general method to predictably tune the analytical performance (sensitivity and linear range) of electrochemical, aptamer-based sensors by utilizing a mixture of rationally designed aptamer sequences that are specific for the same target but with different affinities on the same electrode surface. To demonstrate control over sensor performance, we developed heterogeneous sensors for two representative small molecule targets (adenosine triphosphate and tobramycin). We demonstrate that mixtures of modified sequences can be used to tune the affinity, dynamic range, and sensitivity of the resulting sensors predicted by a bi-Langmuir-type isotherm.

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Year:  2015        PMID: 26005758      PMCID: PMC5627764          DOI: 10.1021/acs.langmuir.5b01418

Source DB:  PubMed          Journal:  Langmuir        ISSN: 0743-7463            Impact factor:   3.882


  30 in total

1.  Label-free electronic detection of thrombin in blood serum by using an aptamer-based sensor.

Authors:  Yi Xiao; Arica A Lubin; Alan J Heeger; Kevin W Plaxco
Journal:  Angew Chem Int Ed Engl       Date:  2005-08-26       Impact factor: 15.336

2.  Aptamer conformational switch as sensitive electrochemical biosensor for potassium ion recognition.

Authors:  Abd-Elgawad Radi; Ciara K O'Sullivan
Journal:  Chem Commun (Camb)       Date:  2006-07-06       Impact factor: 6.222

3.  Detection of oncoprotein platelet-derived growth factor using a fluorescent signaling complex of an aptamer and TOTO.

Authors:  Cuisong Zhou; Yaxin Jiang; Shuang Hou; Baocheng Ma; Xiaohong Fang; Menglong Li
Journal:  Anal Bioanal Chem       Date:  2006-01-31       Impact factor: 4.142

4.  An RNA aptamer-based electrochemical biosensor for detection of theophylline in serum.

Authors:  Elena E Ferapontova; Eva M Olsen; Kurt V Gothelf
Journal:  J Am Chem Soc       Date:  2008-03-07       Impact factor: 15.419

5.  Enhancing the analytical performance of electrochemical RNA aptamer-based sensors for sensitive detection of aminoglycoside antibiotics.

Authors:  Lauren R Schoukroun-Barnes; Samiullah Wagan; Samuillah Wagan; Ryan J White
Journal:  Anal Chem       Date:  2014-01-09       Impact factor: 6.986

6.  On the Signaling of Electrochemical Aptamer-Based Sensors: Collision- and Folding-Based Mechanisms.

Authors:  Yi Xiao; Takanori Uzawa; Ryan J White; Daniel Demartini; Kevin W Plaxco
Journal:  Electroanalysis       Date:  2009-06-01       Impact factor: 3.223

7.  Reagentless measurement of aminoglycoside antibiotics in blood serum via an electrochemical, ribonucleic acid aptamer-based biosensor.

Authors:  Aaron A Rowe; Erin A Miller; Kevin W Plaxco
Journal:  Anal Chem       Date:  2010-09-01       Impact factor: 6.986

8.  Aptamer-based electrochemical biosensor for interferon gamma detection.

Authors:  Ying Liu; Nazgul Tuleouva; Erlan Ramanculov; Alexander Revzin
Journal:  Anal Chem       Date:  2010-10-01       Impact factor: 6.986

9.  Aptamer biosensor based on fluorescence resonance energy transfer from upconverting phosphors to carbon nanoparticles for thrombin detection in human plasma.

Authors:  Yuhui Wang; Lei Bao; Zhihong Liu; Dai-Wen Pang
Journal:  Anal Chem       Date:  2011-09-30       Impact factor: 6.986

10.  Effect of signaling probe conformation on sensor performance of a displacement-based electrochemical DNA sensor.

Authors:  Zhi-gang Yu; Rebecca Y Lai
Journal:  Anal Chem       Date:  2013-03-06       Impact factor: 6.986

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  8 in total

1.  Collagen Membranes with Ribonuclease Inhibitors for Long-Term Stability of Electrochemical Aptamer-Based Sensors Employing RNA.

Authors:  Mirelis Santos-Cancel; Ryan J White
Journal:  Anal Chem       Date:  2017-05-03       Impact factor: 6.986

2.  Accelerating Post-SELEX Aptamer Engineering Using Exonuclease Digestion.

Authors:  Juan Canoura; Haixiang Yu; Obtin Alkhamis; Daniel Roncancio; Rifat Farhana; Yi Xiao
Journal:  J Am Chem Soc       Date:  2020-12-30       Impact factor: 15.419

3.  Direct, Real-Time Detection of Adenosine Triphosphate Release from Astrocytes in Three-Dimensional Culture Using an Integrated Electrochemical Aptamer-Based Sensor.

Authors:  Mirelis Santos-Cancel; Laura W Simpson; Jennie B Leach; Ryan J White
Journal:  ACS Chem Neurosci       Date:  2019-02-20       Impact factor: 4.418

4.  Tuning Biosensor Cross-Reactivity Using Aptamer Mixtures.

Authors:  Yingzhu Liu; Haixiang Yu; Obtin Alkhamis; Jordan Moliver; Yi Xiao
Journal:  Anal Chem       Date:  2020-03-24       Impact factor: 6.986

5.  Electrochemical Studies of Cation Condensation-Induced Collapse of Surface-Bound DNA.

Authors:  Kiana S Sykes; Luiz F L Oliveira; George Stan; Ryan J White
Journal:  Langmuir       Date:  2019-09-25       Impact factor: 3.882

6.  Reagentless, Structure-Switching, Electrochemical Aptamer-Based Sensors.

Authors:  Lauren R Schoukroun-Barnes; Florika C Macazo; Brenda Gutierrez; Justine Lottermoser; Juan Liu; Ryan J White
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2016-04-06       Impact factor: 10.745

7.  Real-time measurement of small molecules directly in awake, ambulatory animals.

Authors:  Netzahualcóyotl Arroyo-Currás; Jacob Somerson; Philip A Vieira; Kyle L Ploense; Tod E Kippin; Kevin W Plaxco
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-09       Impact factor: 11.205

Review 8.  Aptamers for DNA Damage and Repair.

Authors:  Maureen McKeague
Journal:  Int J Mol Sci       Date:  2017-10-22       Impact factor: 5.923

  8 in total

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