Literature DB >> 27068338

The potential utility of re-mining results of somatic mutation testing: KRAS status in lung adenocarcinoma.

Anna Biernacka1, Peter D Tsongalis2, Jason D Peterson1, Francine B de Abreu1, Candice C Black1, Edward J Gutmann1, Xiaoying Liu1, Laura J Tafe1, Christopher I Amos3, Gregory J Tsongalis4.   

Abstract

KRAS mutant non-small cell lung cancers (NSCLCs) vary in clinical outcome depending on which specific KRAS mutation is present. Shorter progression free survival has been associated with KRAS variants G12C and G12V. Cell lines with these variants depend to a greater extent on the RAS/RAF/MEK/ERK signaling pathway and become more susceptible to MEK inhibition. Because different KRAS mutations may lead to altered drug sensitivity, we aimed to determine specific KRAS mutation status in a NSCLC patient cohort at our institution. A total of 502 NSCLC samples were screened for somatic mutations using the 50 gene AmpliSeq™ Cancer Hotspot Panel v2 (CHPv2). However only samples positive for variants in the KRAS gene were included in this study. Variants identified in the KRAS genes were curated using publicly available databases. The overall mutation rate in the KRAS gene was 32.7% (164/502). The most common KRAS mutations were G12C (41%), G12V (19%), and G12D (14%) along with less frequent variants. After re-mining our sequencing data, we found that more than a half of our KRAS mutant NSCLC patients could potentially benefit from the addition of a MEK inhibitor such as selumetinib to standard chemotherapeutic agents. Due to mutated KRAS, these patients will likely fail traditional anti-EGFR therapies but be eligible for newer combination therapies.
Copyright © 2016 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  KRAS; Somatic mutation; data mining; lung cancer; next generation sequencing

Mesh:

Substances:

Year:  2016        PMID: 27068338      PMCID: PMC5506544          DOI: 10.1016/j.cancergen.2016.03.001

Source DB:  PubMed          Journal:  Cancer Genet


  22 in total

1.  Association of KRAS p.G13D mutation with outcome in patients with chemotherapy-refractory metastatic colorectal cancer treated with cetuximab.

Authors:  Wendy De Roock; Derek J Jonker; Federica Di Nicolantonio; Andrea Sartore-Bianchi; Dongsheng Tu; Salvatore Siena; Simona Lamba; Sabrina Arena; Milo Frattini; Hubert Piessevaux; Eric Van Cutsem; Chris J O'Callaghan; Shirin Khambata-Ford; John R Zalcberg; John Simes; Christos S Karapetis; Alberto Bardelli; Sabine Tejpar
Journal:  JAMA       Date:  2010-10-27       Impact factor: 56.272

2.  Effect of KRAS oncogene substitutions on protein behavior: implications for signaling and clinical outcome.

Authors:  Nathan T Ihle; Lauren A Byers; Edward S Kim; Pierre Saintigny; J Jack Lee; George R Blumenschein; Anne Tsao; Suyu Liu; Jill E Larsen; Jing Wang; Lixia Diao; Kevin R Coombes; Lu Chen; Shuxing Zhang; Mena F Abdelmelek; Ximing Tang; Vassiliki Papadimitrakopoulou; John D Minna; Scott M Lippman; Waun K Hong; Roy S Herbst; Ignacio I Wistuba; John V Heymach; Garth Powis
Journal:  J Natl Cancer Inst       Date:  2012-01-13       Impact factor: 13.506

Review 3.  Regulating the regulator: post-translational modification of RAS.

Authors:  Ian M Ahearn; Kevin Haigis; Dafna Bar-Sagi; Mark R Philips
Journal:  Nat Rev Mol Cell Biol       Date:  2011-12-22       Impact factor: 94.444

4.  A phase II trial of Salirasib in patients with lung adenocarcinomas with KRAS mutations.

Authors:  Gregory J Riely; Melissa L Johnson; Chanoa Medina; Naiyer A Rizvi; Vincent A Miller; Mark G Kris; M Catherine Pietanza; Christopher G Azzoli; Lee M Krug; William Pao; Michelle S Ginsberg
Journal:  J Thorac Oncol       Date:  2011-08       Impact factor: 15.609

5.  Clinical outcome of Japanese metastatic colorectal cancer patients harbouring the KRAS p.G13D mutation treated with cetuximab + irinotecan.

Authors:  Hideaki Bando; Takayuki Yoshino; Satoshi Yuki; Eiji Shinozaki; Tomohiro Nishina; Shigenori Kadowaki; Kentaro Yamazaki; Shinya Kajiura; Katsuya Tsuchihara; Satoshi Fujii; Takeharu Yamanaka; Atsushi Ohtsu
Journal:  Jpn J Clin Oncol       Date:  2012-10-15       Impact factor: 3.019

6.  Selumetinib plus docetaxel for KRAS-mutant advanced non-small-cell lung cancer: a randomised, multicentre, placebo-controlled, phase 2 study.

Authors:  Pasi A Jänne; Alice T Shaw; José Rodrigues Pereira; Gaëlle Jeannin; Johan Vansteenkiste; Carlos Barrios; Fabio Andre Franke; Lynda Grinsted; Victoria Zazulina; Paul Smith; Ian Smith; Lucio Crinò
Journal:  Lancet Oncol       Date:  2012-11-28       Impact factor: 41.316

7.  Correlation between KRAS mutation status and response to chemotherapy in patients with advanced non-small cell lung cancer☆.

Authors:  Megan L Hames; Heidi Chen; Wade Iams; Jonathan Aston; Christine M Lovly; Leora Horn
Journal:  Lung Cancer       Date:  2015-11-10       Impact factor: 5.705

8.  The BATTLE trial: personalizing therapy for lung cancer.

Authors:  Edward S Kim; Roy S Herbst; Ignacio I Wistuba; J Jack Lee; George R Blumenschein; Anne Tsao; David J Stewart; Marshall E Hicks; Jeremy Erasmus; Sanjay Gupta; Christine M Alden; Suyu Liu; Ximing Tang; Fadlo R Khuri; Hai T Tran; Bruce E Johnson; John V Heymach; Li Mao; Frank Fossella; Merrill S Kies; Vassiliki Papadimitrakopoulou; Suzanne E Davis; Scott M Lippman; Waun K Hong
Journal:  Cancer Discov       Date:  2011-06-01       Impact factor: 39.397

Review 9.  MEK1 and MEK2 inhibitors and cancer therapy: the long and winding road.

Authors:  Christopher J Caunt; Matthew J Sale; Paul D Smith; Simon J Cook
Journal:  Nat Rev Cancer       Date:  2015-10       Impact factor: 60.716

10.  COSMIC: exploring the world's knowledge of somatic mutations in human cancer.

Authors:  Simon A Forbes; David Beare; Prasad Gunasekaran; Kenric Leung; Nidhi Bindal; Harry Boutselakis; Minjie Ding; Sally Bamford; Charlotte Cole; Sari Ward; Chai Yin Kok; Mingming Jia; Tisham De; Jon W Teague; Michael R Stratton; Ultan McDermott; Peter J Campbell
Journal:  Nucleic Acids Res       Date:  2014-10-29       Impact factor: 16.971

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  22 in total

Review 1.  KRAS G12C Game of Thrones, which direct KRAS inhibitor will claim the iron throne?

Authors:  Misako Nagasaka; Yiwei Li; Ammar Sukari; Sai-Hong Ignatius Ou; Mohammed Najeeb Al-Hallak; Asfar S Azmi
Journal:  Cancer Treat Rev       Date:  2020-01-23       Impact factor: 12.111

2.  Targeting KRAS-Mutant Non-Small-Cell Lung Cancer: One Mutation at a Time, With a Focus on KRAS G12C Mutations.

Authors:  Timothy F Burns; Hossein Borghaei; Suresh S Ramalingam; Tony S Mok; Solange Peters
Journal:  J Clin Oncol       Date:  2020-10-26       Impact factor: 44.544

Review 3.  Brain Metastases Management in Oncogene-Addicted Non-Small Cell Lung Cancer in the Targeted Therapies Era.

Authors:  Elisa De Carlo; Elisa Bertoli; Alessandro Del Conte; Brigida Stanzione; Eleonora Berto; Alberto Revelant; Michele Spina; Alessandra Bearz
Journal:  Int J Mol Sci       Date:  2022-06-09       Impact factor: 6.208

Review 4.  The treatment of advanced non-small cell lung cancer harboring KRAS mutation: a new class of drugs for an old target-a narrative review.

Authors:  Alessia Spagnuolo; Paolo Maione; Cesare Gridelli
Journal:  Transl Lung Cancer Res       Date:  2022-06

Review 5.  NSCLC as the Paradigm of Precision Medicine at Its Finest: The Rise of New Druggable Molecular Targets for Advanced Disease.

Authors:  Anna Michelotti; Marco de Scordilli; Elisa Bertoli; Elisa De Carlo; Alessandro Del Conte; Alessandra Bearz
Journal:  Int J Mol Sci       Date:  2022-06-17       Impact factor: 6.208

6.  Pharmacophoric analogs of sotorasib-entrapped KRAS G12C in its inactive GDP-bound conformation: covalent docking and molecular dynamics investigations.

Authors:  Abdul-Quddus Kehinde Oyedele; Abdeen Tunde Ogunlana; Ibrahim Damilare Boyenle; Najahtulahi Opeyemi Ibrahim; Ibrahim Olajide Gbadebo; Nurudeen Abiodun Owolabi; Ashiru Mojeed Ayoola; Ann Christopher Francis; Olajumoke Habeebah Eyinade; Temitope Isaac Adelusi
Journal:  Mol Divers       Date:  2022-10-21       Impact factor: 3.364

7.  Correlation between Programmed Death Ligand-1(PD-L1) Expression and Driver Gene Mutations in Non-Small Cell Lung Carcinoma- Adenocarcinoma Phenotype.

Authors:  Rahul Kumar Pandey; Saumya Shukla; Nuzhat Husain; Mohammad Hayatul Islam; Rahat Hadi; Surya Kant Tripathi; Ashish Singhal
Journal:  Asian Pac J Cancer Prev       Date:  2022-01-01

Review 8.  Targeted therapy in advanced non-small cell lung cancer: current advances and future trends.

Authors:  Umair Majeed; Rami Manochakian; Yujie Zhao; Yanyan Lou
Journal:  J Hematol Oncol       Date:  2021-07-08       Impact factor: 17.388

9.  Sotorasib for Lung Cancers with KRAS p.G12C Mutation.

Authors:  Ferdinandos Skoulidis; Bob T Li; Grace K Dy; Timothy J Price; Gerald S Falchook; Jürgen Wolf; Antoine Italiano; Martin Schuler; Hossein Borghaei; Fabrice Barlesi; Terufumi Kato; Alessandra Curioni-Fontecedro; Adrian Sacher; Alexander Spira; Suresh S Ramalingam; Toshiaki Takahashi; Benjamin Besse; Abraham Anderson; Agnes Ang; Qui Tran; Omar Mather; Haby Henary; Gataree Ngarmchamnanrith; Gregory Friberg; Vamsidhar Velcheti; Ramaswamy Govindan
Journal:  N Engl J Med       Date:  2021-06-04       Impact factor: 176.079

10.  KRASG12C Inhibition with Sotorasib in Advanced Solid Tumors.

Authors:  David S Hong; Marwan G Fakih; John H Strickler; Jayesh Desai; Gregory A Durm; Geoffrey I Shapiro; Gerald S Falchook; Timothy J Price; Adrian Sacher; Crystal S Denlinger; Yung-Jue Bang; Grace K Dy; John C Krauss; Yasutoshi Kuboki; James C Kuo; Andrew L Coveler; Keunchil Park; Tae Won Kim; Fabrice Barlesi; Pamela N Munster; Suresh S Ramalingam; Timothy F Burns; Funda Meric-Bernstam; Haby Henary; Jude Ngang; Gataree Ngarmchamnanrith; June Kim; Brett E Houk; Jude Canon; J Russell Lipford; Gregory Friberg; Piro Lito; Ramaswamy Govindan; Bob T Li
Journal:  N Engl J Med       Date:  2020-09-20       Impact factor: 176.079

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