Literature DB >> 27055666

A homozygous truncating mutation in PUS3 expands the role of tRNA modification in normal cognition.

Ranad Shaheen1, Lu Han2, Eissa Faqeih3, Nour Ewida1, Eman Alobeid1, Eric M Phizicky4, Fowzan S Alkuraya5,6.   

Abstract

Intellectual disability is a common and highly heterogeneous disorder etiologically. In a multiplex consanguineous family, we applied autozygosity mapping and exome sequencing and identified a novel homozygous truncating mutation in PUS3 that fully segregates with the intellectual disability phenotype. Consistent with the known role of Pus3 in isomerizing uracil to pseudouridine at positions 38 and 39 in tRNA, we found a significant reduction in this post-transcriptional modification of tRNA in patient cells. Our finding adds to a growing list of intellectual disability disorders that are caused by perturbation of various tRNA modifications, which highlights the sensitivity of the brain to these highly conserved processes.

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Year:  2016        PMID: 27055666      PMCID: PMC5152754          DOI: 10.1007/s00439-016-1665-7

Source DB:  PubMed          Journal:  Hum Genet        ISSN: 0340-6717            Impact factor:   4.132


  50 in total

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Authors:  M L Carbone; M Solinas; S Sora; L Panzeri
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2.  Genome sequencing identifies major causes of severe intellectual disability.

Authors:  Christian Gilissen; Jayne Y Hehir-Kwa; Djie Tjwan Thung; Maartje van de Vorst; Bregje W M van Bon; Marjolein H Willemsen; Michael Kwint; Irene M Janssen; Alexander Hoischen; Annette Schenck; Richard Leach; Robert Klein; Rick Tearle; Tan Bo; Rolph Pfundt; Helger G Yntema; Bert B A de Vries; Tjitske Kleefstra; Han G Brunner; Lisenka E L M Vissers; Joris A Veltman
Journal:  Nature       Date:  2014-06-04       Impact factor: 49.962

3.  A novel ribosomopathy caused by dysfunction of RPL10 disrupts neurodevelopment and causes X-linked microcephaly in humans.

Authors:  Susan S Brooks; Alissa L Wall; Christelle Golzio; David W Reid; Amalia Kondyles; Jason R Willer; Christina Botti; Christopher V Nicchitta; Nicholas Katsanis; Erica E Davis
Journal:  Genetics       Date:  2014-10       Impact factor: 4.562

4.  Purification, structure, and properties of Escherichia coli tRNA pseudouridine synthase I.

Authors:  H O Kammen; C C Marvel; L Hardy; E E Penhoet
Journal:  J Biol Chem       Date:  1988-02-15       Impact factor: 5.157

Review 5.  Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.

Authors:  David T Miller; Margaret P Adam; Swaroop Aradhya; Leslie G Biesecker; Arthur R Brothman; Nigel P Carter; Deanna M Church; John A Crolla; Evan E Eichler; Charles J Epstein; W Andrew Faucett; Lars Feuk; Jan M Friedman; Ada Hamosh; Laird Jackson; Erin B Kaminsky; Klaas Kok; Ian D Krantz; Robert M Kuhn; Charles Lee; James M Ostell; Carla Rosenberg; Stephen W Scherer; Nancy B Spinner; Dimitri J Stavropoulos; James H Tepperberg; Erik C Thorland; Joris R Vermeesch; Darrel J Waggoner; Michael S Watson; Christa Lese Martin; David H Ledbetter
Journal:  Am J Hum Genet       Date:  2010-05-14       Impact factor: 11.025

6.  Genes that Affect Brain Structure and Function Identified by Rare Variant Analyses of Mendelian Neurologic Disease.

Authors:  Ender Karaca; Tamar Harel; Davut Pehlivan; Shalini N Jhangiani; Tomasz Gambin; Zeynep Coban Akdemir; Claudia Gonzaga-Jauregui; Serkan Erdin; Yavuz Bayram; Ian M Campbell; Jill V Hunter; Mehmed M Atik; Hilde Van Esch; Bo Yuan; Wojciech Wiszniewski; Sedat Isikay; Gozde Yesil; Ozge O Yuregir; Sevcan Tug Bozdogan; Huseyin Aslan; Hatip Aydin; Tulay Tos; Ayse Aksoy; Darryl C De Vivo; Preti Jain; B Bilge Geckinli; Ozlem Sezer; Davut Gul; Burak Durmaz; Ozgur Cogulu; Ferda Ozkinay; Vehap Topcu; Sukru Candan; Alper Han Cebi; Mevlit Ikbal; Elif Yilmaz Gulec; Alper Gezdirici; Erkan Koparir; Fatma Ekici; Salih Coskun; Salih Cicek; Kadri Karaer; Asuman Koparir; Mehmet Bugrahan Duz; Emre Kirat; Elif Fenercioglu; Hakan Ulucan; Mehmet Seven; Tulay Guran; Nursel Elcioglu; Mahmut Selman Yildirim; Dilek Aktas; Mehmet Alikaşifoğlu; Mehmet Ture; Tahsin Yakut; John D Overton; Adnan Yuksel; Mustafa Ozen; Donna M Muzny; David R Adams; Eric Boerwinkle; Wendy K Chung; Richard A Gibbs; James R Lupski
Journal:  Neuron       Date:  2015-11-04       Impact factor: 17.173

7.  Nonsense mutation in pseudouridylate synthase 1 (PUS1) in two brothers affected by myopathy, lactic acidosis and sideroblastic anaemia (MLASA).

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Journal:  J Med Genet       Date:  2006-10-20       Impact factor: 6.318

8.  The RNA Modification Database, RNAMDB: 2011 update.

Authors:  William A Cantara; Pamela F Crain; Jef Rozenski; James A McCloskey; Kimberly A Harris; Xiaonong Zhang; Franck A P Vendeix; Daniele Fabris; Paul F Agris
Journal:  Nucleic Acids Res       Date:  2010-11-10       Impact factor: 16.971

9.  tRNA methyltransferase homolog gene TRMT10A mutation in young onset diabetes and primary microcephaly in humans.

Authors:  Mariana Igoillo-Esteve; Anne Genin; Nelle Lambert; Julie Désir; Isabelle Pirson; Baroj Abdulkarim; Nicolas Simonis; Anais Drielsma; Lorella Marselli; Piero Marchetti; Pierre Vanderhaeghen; Décio L Eizirik; Wim Wuyts; Cécile Julier; Ali J Chakera; Sian Ellard; Andrew T Hattersley; Marc Abramowicz; Miriam Cnop
Journal:  PLoS Genet       Date:  2013-10-31       Impact factor: 5.917

10.  Functional importance of Ψ38 and Ψ39 in distinct tRNAs, amplified for tRNAGln(UUG) by unexpected temperature sensitivity of the s2U modification in yeast.

Authors:  Lu Han; Yoshiko Kon; Eric M Phizicky
Journal:  RNA       Date:  2014-12-12       Impact factor: 4.942

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  49 in total

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Authors:  Eszter Balogh; Jennifer C Chandler; Máté Varga; Mona Tahoun; Dóra K Menyhárd; Gusztáv Schay; Tomas Goncalves; Renáta Hamar; Regina Légrádi; Ákos Szekeres; Olivier Gribouval; Robert Kleta; Horia Stanescu; Detlef Bockenhauer; Andrea Kerti; Hywel Williams; Veronica Kinsler; Wei-Li Di; David Curtis; Maria Kolatsi-Joannou; Hafsa Hammid; Anna Szőcs; Kristóf Perczel; Erika Maka; Gergely Toldi; Florentina Sava; Christelle Arrondel; Magdolna Kardos; Attila Fintha; Ahmed Hossain; Felipe D'Arco; Mario Kaliakatsos; Jutta Koeglmeier; William Mifsud; Mariya Moosajee; Ana Faro; Eszter Jávorszky; Gábor Rudas; Marwa H Saied; Salah Marzouk; Kata Kelen; Judit Götze; George Reusz; Tivadar Tulassay; François Dragon; Géraldine Mollet; Susanne Motameny; Holger Thiele; Guillaume Dorval; Peter Nürnberg; András Perczel; Attila J Szabó; David A Long; Kazunori Tomita; Corinne Antignac; Aoife M Waters; Kálmán Tory
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-17       Impact factor: 11.205

Review 2.  The epitranscriptome and synaptic plasticity.

Authors:  Mathieu N Flamand; Kate D Meyer
Journal:  Curr Opin Neurobiol       Date:  2019-05-17       Impact factor: 6.627

3.  PUS7 mutations impair pseudouridylation in humans and cause intellectual disability and microcephaly.

Authors:  Ranad Shaheen; Monika Tasak; Sateesh Maddirevula; Ghada M H Abdel-Salam; Inas S M Sayed; Anas M Alazami; Tarfa Al-Sheddi; Eman Alobeid; Eric M Phizicky; Fowzan S Alkuraya
Journal:  Hum Genet       Date:  2019-02-18       Impact factor: 4.132

4.  tRNA N6-adenosine threonylcarbamoyltransferase defect due to KAE1/TCS3 (OSGEP) mutation manifest by neurodegeneration and renal tubulopathy.

Authors:  Simon Edvardson; Laurence Prunetti; Aiman Arraf; Drago Haas; Jo Marie Bacusmo; Jennifer F Hu; Asas Ta-Shma; Peter C Dedon; Valérie de Crécy-Lagard; Orly Elpeleg
Journal:  Eur J Hum Genet       Date:  2017-03-08       Impact factor: 4.246

5.  Recessive Truncating Mutations in ALKBH8 Cause Intellectual Disability and Severe Impairment of Wobble Uridine Modification.

Authors:  Dorota Monies; Cathrine Broberg Vågbø; Mohammad Al-Owain; Suzan Alhomaidi; Fowzan S Alkuraya
Journal:  Am J Hum Genet       Date:  2019-05-09       Impact factor: 11.025

6.  Variants in PUS7 Cause Intellectual Disability with Speech Delay, Microcephaly, Short Stature, and Aggressive Behavior.

Authors:  Arjan P M de Brouwer; Rami Abou Jamra; Nadine Körtel; Clara Soyris; Daniel L Polla; Modi Safra; Avia Zisso; Christopher A Powell; Pedro Rebelo-Guiomar; Nadja Dinges; Violeta Morin; Michael Stock; Mureed Hussain; Mohsin Shahzad; Saima Riazuddin; Zubair M Ahmed; Rolph Pfundt; Franziska Schwarz; Lonneke de Boer; André Reis; Detilina Grozeva; F Lucy Raymond; Sheikh Riazuddin; David A Koolen; Michal Minczuk; Jean-Yves Roignant; Hans van Bokhoven; Schraga Schwartz
Journal:  Am J Hum Genet       Date:  2018-12-06       Impact factor: 11.025

Review 7.  Epitranscriptomic Code and Its Alterations in Human Disease.

Authors:  Rajashekar Varma Kadumuri; Sarath Chandra Janga
Journal:  Trends Mol Med       Date:  2018-08-14       Impact factor: 11.951

Review 8.  tRNA Metabolism and Neurodevelopmental Disorders.

Authors:  Ashleigh E Schaffer; Otis Pinkard; Jeffery M Coller
Journal:  Annu Rev Genomics Hum Genet       Date:  2019-05-13       Impact factor: 8.929

9.  Differential roles of human PUS10 in miRNA processing and tRNA pseudouridylation.

Authors:  Jinghui Song; Yuan Zhuang; Chenxu Zhu; Haowei Meng; Bo Lu; Bingteng Xie; Jinying Peng; Mo Li; Chengqi Yi
Journal:  Nat Chem Biol       Date:  2019-12-09       Impact factor: 15.040

Review 10.  Role of RNA modifications in brain and behavior.

Authors:  Y Jung; D Goldman
Journal:  Genes Brain Behav       Date:  2018-03       Impact factor: 3.449

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