Literature DB >> 31082281

tRNA Metabolism and Neurodevelopmental Disorders.

Ashleigh E Schaffer1, Otis Pinkard1, Jeffery M Coller1.   

Abstract

tRNAs are short noncoding RNAs required for protein translation. The human genome includes more than 600 putative tRNA genes, many of which are considered redundant. tRNA transcripts are subject to tightly controlled, multistep maturation processes that lead to the removal of flanking sequences and the addition of nontemplated nucleotides. Furthermore, tRNAs are highly structured and posttranscriptionally modified. Together, these unique features have impeded the adoption of modern genomics and transcriptomics technologies for tRNA studies. Nevertheless, it has become apparent from human neurogenetic research that many tRNA biogenesis proteins cause brain abnormalities and other neurological disorders when mutated. The cerebral cortex, cerebellum, and peripheral nervous system show defects, impairment, and degeneration upon tRNA misregulation, suggesting that they are particularly sensitive to changes in tRNA expression or function. An integrated approach to identify tRNA species and contextually characterize tRNA function will be imperative to drive future tool development and novel therapeutic design for tRNA-associated disorders.

Entities:  

Keywords:  neurodegeneration; neurodevelopment; oligodendrocyte; sequencing; tRNA; translation

Mesh:

Substances:

Year:  2019        PMID: 31082281      PMCID: PMC6716996          DOI: 10.1146/annurev-genom-083118-015334

Source DB:  PubMed          Journal:  Annu Rev Genomics Hum Genet        ISSN: 1527-8204            Impact factor:   8.929


  210 in total

1.  tRNA discrimination at the binding step by a class II aminoacyl-tRNA synthetase.

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Journal:  Biochemistry       Date:  1999-10-12       Impact factor: 3.162

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Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-06       Impact factor: 11.205

3.  The structural basis for tRNA recognition and pseudouridine formation by pseudouridine synthase I.

Authors:  P G Foster; L Huang; D V Santi; R M Stroud
Journal:  Nat Struct Biol       Date:  2000-01

4.  Coordination of tRNA nuclear export with processing of tRNA.

Authors:  G Lipowsky; F R Bischoff; E Izaurralde; U Kutay; S Schäfer; H J Gross; H Beier; D Görlich
Journal:  RNA       Date:  1999-04       Impact factor: 4.942

5.  Control of transfer RNA maturation by phosphorylation of the human La antigen on serine 366.

Authors:  R V Intine; A L Sakulich; S B Koduru; Y Huang; E Pierstorff; J L Goodier; L Phan; R J Maraia
Journal:  Mol Cell       Date:  2000-08       Impact factor: 17.970

6.  Inhibition of RNase P RNA cleavage by aminoglycosides.

Authors:  N E Mikkelsen; M Brännvall; A Virtanen; L A Kirsebom
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

Review 7.  Ribosome fidelity: tRNA discrimination, proofreading and induced fit.

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Journal:  Trends Biochem Sci       Date:  2001-02       Impact factor: 13.807

8.  Progressive infantile neurodegeneration caused by 2-methyl-3-hydroxybutyryl-CoA dehydrogenase deficiency: a novel inborn error of branched-chain fatty acid and isoleucine metabolism.

Authors:  J Zschocke; J P Ruiter; J Brand; M Lindner; G F Hoffmann; R J Wanders; E Mayatepek
Journal:  Pediatr Res       Date:  2000-12       Impact factor: 3.756

9.  Characterization of RNase P from Thermotoga maritima.

Authors:  R Paul; D Lazarev; S Altman
Journal:  Nucleic Acids Res       Date:  2001-02-15       Impact factor: 16.971

10.  Atypical MELAS syndrome associated with a new mitochondrial tRNA glutamine point mutation.

Authors:  M Bataillard; E Chatzoglou; L Rumbach; D Sternberg; A Tournade; P Laforêt; C Jardel; T Maisonobe; A Lombès
Journal:  Neurology       Date:  2001-02-13       Impact factor: 9.910

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  23 in total

Review 1.  The tRNA regulome in neurodevelopmental and neuropsychiatric disease.

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Review 2.  RNA Polymerases I and III in development and disease.

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Journal:  Semin Cell Dev Biol       Date:  2022-04-11       Impact factor: 7.499

Review 3.  Decoding mixed messages in the developing cortex: translational regulation of neural progenitor fate.

Authors:  Mariah L Hoye; Debra L Silver
Journal:  Curr Opin Neurobiol       Date:  2020-10-23       Impact factor: 6.627

4.  Subcellular relocalization and nuclear redistribution of the RNA methyltransferases TRMT1 and TRMT1L upon neuronal activation.

Authors:  Nicky Jonkhout; Sonia Cruciani; Helaine Graziele Santos Vieira; Julia Tran; Huanle Liu; Ganqiang Liu; Russell Pickford; Dominik Kaczorowski; Gloria R Franco; Franz Vauti; Noelia Camacho; Seyedeh Sedigheh Abedini; Hossein Najmabadi; Lluís Ribas de Pouplana; Daniel Christ; Nicole Schonrock; John S Mattick; Eva Maria Novoa
Journal:  RNA Biol       Date:  2021-02-15       Impact factor: 4.652

Review 5.  Roles of tRNA metabolism in aging and lifespan.

Authors:  Zheng Zhou; Bao Sun; Dongsheng Yu; Meng Bian
Journal:  Cell Death Dis       Date:  2021-05-26       Impact factor: 8.469

6.  Comprehensive and integrative analyses identify TYW5 as a schizophrenia risk gene.

Authors:  Chengcheng Zhang; Xiaojing Li; Liansheng Zhao; Rong Liang; Wei Deng; Wanjun Guo; Qiang Wang; Xun Hu; Xiangdong Du; Pak Chung Sham; Xiongjian Luo; Tao Li
Journal:  BMC Med       Date:  2022-05-09       Impact factor: 11.150

Review 7.  RNA polymerase III transcription as a disease factor.

Authors:  Meghdad Yeganeh; Nouria Hernandez
Journal:  Genes Dev       Date:  2020-07-01       Impact factor: 11.361

8.  Codon and amino acid content are associated with mRNA stability in mammalian cells.

Authors:  Megan E Forrest; Otis Pinkard; Sophie Martin; Thomas J Sweet; Gavin Hanson; Jeff Coller
Journal:  PLoS One       Date:  2020-02-13       Impact factor: 3.240

9.  Unveiling Sex-Based Differences in the Effects of Alcohol Abuse: A Comprehensive Functional Meta-Analysis of Transcriptomic Studies.

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Review 10.  MRNA Transcription, Translation, and Defects in Developmental Cognitive and Behavioral Disorders.

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Journal:  Front Mol Biosci       Date:  2020-09-25
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