Literature DB >> 2036682

A gene tightly linked to CEN6 is important for growth of Saccharomyces cerevisiae.

M L Carbone1, M Solinas, S Sora, L Panzeri.   

Abstract

Transcriptional analysis of the region flanking the left boundary of the centromere of chromosome VI revealed the presence of a gene immediately adjacent to CEN6. The transcription of the gene is directed toward the centromere, and nucleotide sequence analysis showed that the coding region terminates only 50 bp away from CEN6. Our results extend to chromosome VI the observation that centromere-flanking regions of S. cerevisiae are transcriptionally active. Disruption of the coding region of the gene showed that its product, whilst not essential for cell viability, is important for normal cell growth. The gene has been termed DEG1 (DEpressed Growth rate). Comparison of the deduced amino acid sequence of DEG1 with a protein sequence databank revealed homology with the enzyme tRNA pseudouridine synthase I of E. coli.

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Year:  1991        PMID: 2036682     DOI: 10.1007/bf00362080

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  42 in total

1.  Construction of multicopy yeast plasmids with regulated centromere function.

Authors:  E Chlebowicz-Sledziewska; A Z Sledziewski
Journal:  Gene       Date:  1985       Impact factor: 3.688

2.  A transcription map of a yeast centromere plasmid: unexpected transcripts and altered gene expression.

Authors:  G T Marczynski; J A Jaehning
Journal:  Nucleic Acids Res       Date:  1985-12-09       Impact factor: 16.971

3.  Isolation and characterization of MOD5, a gene required for isopentenylation of cytoplasmic and mitochondrial tRNAs of Saccharomyces cerevisiae.

Authors:  M E Dihanich; D Najarian; R Clark; E C Gillman; N C Martin; A K Hopper
Journal:  Mol Cell Biol       Date:  1987-01       Impact factor: 4.272

4.  Structure and sequence of the centromeric DNA of chromosome 4 in Saccharomyces cerevisiae.

Authors:  C Mann; R W Davis
Journal:  Mol Cell Biol       Date:  1986-01       Impact factor: 4.272

5.  A heterologous system for detecting eukaryotic enzymes which synthesize pseudouridine in transfer ribonucleic acids.

Authors:  G T Mullenbach; H O Kammen; E E Penhoet
Journal:  J Biol Chem       Date:  1976-08-10       Impact factor: 5.157

6.  The nucleotide sequence of the DNA ligase gene (CDC9) from Saccharomyces cerevisiae: a gene which is cell-cycle regulated and induced in response to DNA damage.

Authors:  D G Barker; J H White; L H Johnston
Journal:  Nucleic Acids Res       Date:  1985-12-09       Impact factor: 16.971

7.  DNA sequence required for efficient transcription termination in yeast.

Authors:  K S Zaret; F Sherman
Journal:  Cell       Date:  1982-03       Impact factor: 41.582

8.  Transcription interferes with elements important for chromosome maintenance in Saccharomyces cerevisiae.

Authors:  M Snyder; R J Sapolsky; R W Davis
Journal:  Mol Cell Biol       Date:  1988-05       Impact factor: 4.272

9.  Amino-terminal extension generated from an upstream AUG codon is not required for mitochondrial import of yeast N2,N2-dimethylguanosine-specific tRNA methyltransferase.

Authors:  S R Ellis; A K Hopper; N C Martin
Journal:  Proc Natl Acad Sci U S A       Date:  1987-08       Impact factor: 11.205

10.  Dihydrouridine-deficient tRNAs in Saccharomyces cerevisiae.

Authors:  R Y Lo; J B Bell; K L Roy
Journal:  Nucleic Acids Res       Date:  1982-02-11       Impact factor: 16.971

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  9 in total

1.  A homozygous truncating mutation in PUS3 expands the role of tRNA modification in normal cognition.

Authors:  Ranad Shaheen; Lu Han; Eissa Faqeih; Nour Ewida; Eman Alobeid; Eric M Phizicky; Fowzan S Alkuraya
Journal:  Hum Genet       Date:  2016-04-07       Impact factor: 4.132

2.  Pseudouridine synthases: four families of enzymes containing a putative uridine-binding motif also conserved in dUTPases and dCTP deaminases.

Authors:  E V Koonin
Journal:  Nucleic Acids Res       Date:  1996-06-15       Impact factor: 16.971

3.  Analysis of the chromatin domain organisation around the plastocyanin gene reveals an MAR-specific sequence element in Arabidopsis thaliana.

Authors:  C M van Drunen; R W Oosterling; G M Keultjes; P J Weisbeek; R van Driel; S C Smeekens
Journal:  Nucleic Acids Res       Date:  1997-10-01       Impact factor: 16.971

4.  The yeast gene YNL292w encodes a pseudouridine synthase (Pus4) catalyzing the formation of psi55 in both mitochondrial and cytoplasmic tRNAs.

Authors:  H F Becker; Y Motorin; R J Planta; H Grosjean
Journal:  Nucleic Acids Res       Date:  1997-11-15       Impact factor: 16.971

5.  DEG1, encoding the tRNA:pseudouridine synthase Pus3p, impacts HOT1-stimulated recombination in Saccharomyces cerevisiae.

Authors:  C E Hepfer; S Arnold-Croop; H Fogell; K G Steudel; M Moon; A Roff; S Zaikoski; A Rickman; K Komsisky; D L Harbaugh; G I Lang; R L Keil
Journal:  Mol Genet Genomics       Date:  2005-10-18       Impact factor: 3.291

6.  A pseudouridine synthase homologue is critical to cellular differentiation in Toxoplasma gondii.

Authors:  Matthew Z Anderson; Jeremy Brewer; Upinder Singh; John C Boothroyd
Journal:  Eukaryot Cell       Date:  2009-01-05

7.  Solution structure of psi32-modified anticodon stem-loop of Escherichia coli tRNAPhe.

Authors:  Javier Cabello-Villegas; Edward P Nikonowicz
Journal:  Nucleic Acids Res       Date:  2005-12-23       Impact factor: 16.971

8.  Functional importance of Ψ38 and Ψ39 in distinct tRNAs, amplified for tRNAGln(UUG) by unexpected temperature sensitivity of the s2U modification in yeast.

Authors:  Lu Han; Yoshiko Kon; Eric M Phizicky
Journal:  RNA       Date:  2014-12-12       Impact factor: 4.942

Review 9.  Eukaryotic stand-alone pseudouridine synthases - RNA modifying enzymes and emerging regulators of gene expression?

Authors:  Anne C Rintala-Dempsey; Ute Kothe
Journal:  RNA Biol       Date:  2017-01-03       Impact factor: 4.652

  9 in total

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