| Literature DB >> 27046986 |
Shivani Modi1, M N Brahmbhatt1, Y A Chatur1, J B Nayak1.
Abstract
AIM: During the last decades, number of food poisoning cases due to Campylobacter occurred, immensely. After poultry, raw milk acts as a second main source of Campylobacter. Therefore, the present study was undertaken to detect the prevalence of Campylobacters in milk and milk products and to know the antibiotic sensitivity and virulence gene profile of Campylobacter spp. in Anand city, Gujarat, India.Entities:
Keywords: Campylobacter jejuni; antibiotic susceptibility; polymerase chain reaction; virulence gene
Year: 2015 PMID: 27046986 PMCID: PMC4777796 DOI: 10.14202/vetworld.2015.1-8
Source DB: PubMed Journal: Vet World ISSN: 0972-8988
List of the genus and species specific primers.
| Gene name | Primer Sequence | Target gene | Amplicon size (bp) | Reference |
|---|---|---|---|---|
| C412F | GGATGACACTTTTCGGAGC | 816 | 78 | |
| C1228R | CATTGTAGCACGTGTGTC | |||
| Hip O1 | AGCTAGCTTCGCATAATAACTTG | 735 | 79 | |
| Hip O2 | GAAGAGGGTTTGGGTGGT | |||
| CC1 | GGTATGATTTCTACAAAGCGAG | 500 | 79 | |
| CC2 | ATAAAAAGACTATCGTCGCGT |
C. coli=Campylobacter coli, C. jejuni=Campylobacter jejuni
Oligonucleotide sequence of virulence genes.
| Target gene | Primer | Primer Sequence (5’→3’) | Amplicon size (bp) | Reference |
|---|---|---|---|---|
| Flagellin gene | fla 1 | GGATTTCGTATTAACACAAATGGTGC | 1725 | 80 |
| fla 2 | CTGTAGTAATCTTAAAACATTTTG | |||
| cad F | TTGAAGGTAATTTAGATATG | 400 | 66 | |
| cad R | CTAATACCTAAAGTTGAAAC | |||
| Invasion associated marker | iam F | GCGCAAAATATTATCACCC | 518 | 34 |
| iam R | TTCACGACTACTATGCGG | |||
| Flagellar synthesis and modification, | JL 1225 | GAGCGTTTAGAATGGGTGTG | 390 | 16 |
| JL 1226 | GCCAGGAATTGATGGCATAG | |||
| Cytolethal distending toxin SubunitB gene | CdtB-F | GTTGGCACTTGGAATTTGCAAGGC | 495 | 74 |
| CdtB-R | GTTAAAATCCCCTGCTATCAACCA |
PCR cyclic condition of virulence genes.
| Gene | Initial denaturation | 35 cycles | Final extension | ||
|---|---|---|---|---|---|
| Denaturation | Annealing | Extension | |||
| Flagellin gene | 94°C | 94°C | 52°C | 72°C | 72°C |
| 5 min | 45 s | 45 s | 1 min | 10 min | |
| 94°C | 94°C | 45°C | 72°C | 72°C | |
| 5 min | 1 min | 45 s | 1 min | 8 min | |
| Invasion associated marker | 94°C | 94°C | 52°C | 72°C | 72°C |
| 5 min | 1 min | 1 min | 1 min | 5 min | |
| Flagellar synthesis and modification, | 95°C | 95°C | 54°C | 72°C | 72°C |
| 5 min | 1 min | 1 min | 1 min | 5 min | |
| Cytolethal distending toxin subunit B gene | 95°C | 95°C | 57°C | 72°C | 72°C |
| 5 min | 30 s | 30 s | 30 s | 10 min | |
PCR=Polymerase chain reaction
Figure-1Amplification of PCR products for the detection of Campylobacter spp. and virulence genes