| Literature DB >> 27044414 |
Carolina Bonilla1,2, Sarah J Lewis1,2, Richard M Martin3,4,5, Jenny L Donovan1, Freddie C Hamdy6, David E Neal6,7, Rosalind Eeles8,9, Doug Easton10, Zsofia Kote-Jarai8, Ali Amin Al Olama10, Sara Benlloch10, Kenneth Muir11,12, Graham G Giles13,14, Fredrik Wiklund15, Henrik Gronberg15, Christopher A Haiman16, Johanna Schleutker17,18, Børge G Nordestgaard19, Ruth C Travis20, Nora Pashayan21,22, Kay-Tee Khaw23, Janet L Stanford24,25, William J Blot26, Stephen Thibodeau27, Christiane Maier28,29, Adam S Kibel30,31, Cezary Cybulski32, Lisa Cannon-Albright33, Hermann Brenner34,35,36, Jong Park37, Radka Kaneva38, Jyotsna Batra39, Manuel R Teixeira40,41, Hardev Pandha42, Mark Lathrop43,44, George Davey Smith1,2.
Abstract
BACKGROUND: Epidemiological studies have observed a positive association between an earlier age at sexual development and prostate cancer, but markers of sexual maturation in boys are imprecise and observational estimates are likely to suffer from a degree of uncontrolled confounding. To obtain causal estimates, we examined the role of pubertal development in prostate cancer using genetic polymorphisms associated with Tanner stage in adolescent boys in a Mendelian randomization (MR) approach.Entities:
Keywords: Boys; Mendelian randomization; Prostate cancer; Puberty; Tanner scale
Mesh:
Year: 2016 PMID: 27044414 PMCID: PMC4820939 DOI: 10.1186/s12916-016-0602-x
Source DB: PubMed Journal: BMC Med ISSN: 1741-7015 Impact factor: 8.775
SNPs included in the pubertal development genetic risk score in the ProtecT study
| SNP | Nearest gene (distance) | Chr | Positiona | Tanner stage decreasing/other allele | Tanner stage decreasing allele frequency (ProtecT controls)b | Tanner stage decreasing allele frequency (CEU) | Hardy–Weinberg equilibrium | Gene function |
|---|---|---|---|---|---|---|---|---|
| rs2274465 |
| 1 | 44121557 | C/G | 0.664 | 0.676 | 0.9 | Histone demethylation |
| rs6427782 |
| 1 | 199798339 | A/G | 0.510 | 0.556 | 0.005 | DNA binding/steroid hormone receptor activity |
| rs6762477 |
| 3 | 50093209 | A/G | 0.547 | 0.551 | 0.6 | Regulation of alternative splicing |
| rs2153127 |
| 6 | 105348544 | T/C | 0.530 | 0.515 | 0.8 | Cell reprogramming |
| rs7759938 |
| 6 | 105378954 | C/T | 0.318 | 0.373 | 1.0 | Cell reprogramming |
| rs7821178 |
| 8 | 78093837 | C/A | 0.665 | 0.658 | 0.1 | Peroxisome biogenesis |
| rs10453225 |
| 9 | 108920220 | G/T | 0.681 | 0.700 | 0.2 | Maintenance of intracellular calcium release |
| rs2090409 |
| 9 | 108967088 | C/A | 0.680 | 0.688 | 0.3 | Maintenance of intracellular calcium release |
| rs10739221 |
| 9 | 109060830 | C/T | 0.772 | 0.770 | 0.5 | Maintenance of intracellular calcium release |
| rs1324913 |
| 13 | 74635588 | T/G | 0.338 | 0.312 | 0.6 | Transcription factor/gene expression regulation |
| rs12915845 |
| 15 | 89042467 | C/T | 0.587 | 0.582 | 0.1 | Development regulation |
| rs246185 |
| 16 | 14395432 | C/T | 0.313 | 0.300 | 0.6 | Regulation of immediate early genes/muscle genes |
| rs12446632 |
| 16 | 19935389 | A/G | 0.146 | 0.127 | 0.8 | Modulation of insulin secretion |
aPosition based on GRCh37.p13 assembly
b n = 1,791
Clinical characteristics of prostate cancer cases and controls in the ProtecT study
| Cases | Controls | n |
| |
|---|---|---|---|---|
| Total, n | 1,136 | 1,791 | 2,927 | |
| Age, years | 62.2 ± 5.1 | 61.6 ± 5.2 | 2,927 | 0.003 |
| PSA, ng/mL | 8.5 ± 15.4 | 1.1 ± 1.3 | 2,925 | <0.001 |
| Gleason grade, % (<7/≥7) | 70.0/30.0 | n/a | 1,135 | |
| TNM stage, % (localized/advanced) | 88.4/11.6 | n/a | 1,136 | |
| BPH, % (no/yes)a | 92.7/7.3 | 89.0/11.0 | 1,363 | 0.02 |
| BMI, kg/m2 | 27.0 ± 3.7 | 27.5 ± 4.1 | 1,973 | 0.01 |
| Height, cm | 176.4 ± 7.0 | 175.9 ± 6.9 | 2,078 | 0.2 |
| Weight, kg | 84.5 ± 13.0 | 85.9 ± 14.6 | 2,677 | 0.02 |
| leg length, cm | 76.7 ± 4.8 | 76.5 ± 4.6 | 2,055 | 0.3 |
| Birthweight, g | 3,437.2 ± 744.9 | 3,476.1 ± 663.4 | 939 | 0.4 |
| Family history, % (no/yes)b | 92.7/7.3 | 95.0/5.0 | 2,908 | 0.01 |
| Diabetes, % (no/yes)c | 92.8/7.2 | 91.1/8.9 | 1,895 | 0.2 |
| IGF-I, ng/mL | 156.1 ± 55.8 | 163.2 ± 57.0 | 1,756 | 0.01 |
| IGF-II, ng/mL | 862.1 ± 323.6 | 733.7 ± 265.3 | 1,720 | <0.001 |
| IGFBP-2, ng/mL | 731.5 ± 426.0 | 726.2 ± 444.7 | 1,745 | 0.5d |
| IGFBP-3, ng/mL | 4,673.6 ± 1,041.9 | 4,370.8 ± 1,055.7 | 1,711 | <0.001 |
| IGF-I:IGFBP-3 molar ratioe | 0.12 ± 0.04 | 0.14 ± 0.06 | 1,711 | <0.001d |
Continuous variables: mean ± SD
Two-sided t-tests and χ2 tests were used to analyze continuous and categorical variables, respectively
PSA Prostate-specific antigen, BMI Body mass index, BPH Benign prostatic hyperplasia, IGF Insulin-like growth factor, IGFBP Insulin-like growth factor binding protein
an cases = 682, n controls = 681
bn cases = 1,131, n controls = 1,777
cn cases = 735, n controls = 1,160
d P value obtained from analysis of natural log transformed variable
eIGF-I:IGFBP-3 molar ratio = 0.13*[IGF-I]:0.036*[IGFBP-3]
Pubertal development genetic risk score and prostate cancer risk, stage and grade in the ProtecT study
| Trait | n | OR | 95 % CI |
|
|---|---|---|---|---|
| Control/case (0/1) | 2,927 | 0.95 | 0.87–1.04 | 0.3 |
| Gleason score (0:≤6/1:≥7)a | 1,135 | 0.76 | 0.64–0.89 | 0.001 |
| Stage (0:localised/1:locally advanced) | 1,136 | 0.80 | 0.64–1.01 | 0.06 |
| BPH (0:no/1:yes) | 1,363 | 1.11 | 0.88–1.40 | 0.4 |
ORs indicate effects per tertile increase in the genetic score, adjusted by age, recruitment centre and 10 principal components for population structure
a0 corresponds to the reference category
BPH Benign prostatic hyperplasia, CI Confidence intervals, OR Odds ratio
Odds ratios (ORs) for high- vs low-grade prostate cancer by pubertal development genetic risk score tertiles in the ProtecT study
| Genetic score tertiles | OR | 95 % CI |
|
|---|---|---|---|
| T1 | Reference | 0.003 | |
| T2 | 0.79 | 0.58–1.07 | |
| T3 | 0.57 | 0.41–0.79 |
High-grade prostate cancer = Gleason ≥7
Low-grade prostate cancer = Gleason ≤6
OR adjusted by age, recruitment centre and 10 principal components for population structure
n = 1,135
CI Confidence intervals
Fig. 1Effect of Tanner stage change in boys on the risk of developing high-grade prostate cancer. In ProtecT, proportional risk reduction for high-grade prostate cancer (Gleason ≥7) for each SNP plotted against each SNP’s absolute effect on lowering Tanner stage. The trend line, set to intercept the axes at the origin, represents the percentage risk reduction for high-grade disease per unit decrease in Tanner stage. Excluding SNP rs6427782, which was out of Hardy–Weinberg equilibrium pre-Bonferroni correction for multiple testing, from the plot did not produce an appreciable change in the results. Tanner genital stage in boys was treated as a quantitative trait on a scale of 1–5, according to the studies where the associated SNPs were first described [8, 9]
Fig. 2Pubertal development genetic risk score and prostate cancer risk (top) and stage (bottom) in the PRACTICAL consortium