Literature DB >> 27040378

Implications of genotypic differences in the generation of a urinary metabolomics radiation signature.

Evagelia C Laiakis1, Evan L Pannkuk2, Maria Elena Diaz-Rubio3, Yi-Wen Wang2, Tytus D Mak4, Cynthia M Simbulan-Rosenthal2, David J Brenner5, Albert J Fornace6.   

Abstract

The increased threat of radiological terrorism and accidental nuclear exposures, together with increased usage of radiation-based medical procedures, has made necessary the development of minimally invasive methods for rapid identification of exposed individuals. Genetically predisposed radiosensitive individuals comprise a significant number of the population and require specialized attention and treatments after such events. Metabolomics, the assessment of the collective small molecule content in a given biofluid or tissue, has proven effective in the rapid identification of radiation biomarkers and metabolic perturbations. To investigate how the genotypic background may alter the ionizing radiation (IR) signature, we analyzed urine from Parp1(-/-) mice, as a model radiosensitive genotype, exposed to IR by utilizing the analytical power of liquid chromatography coupled with mass spectrometry (LC-MS), as urine has been thoroughly investigated in wild type (WT) mice in previous studies from our laboratory. Samples were collected at days one and three after irradiation, time points that are important for the early and efficient triage of exposed individuals. Time-dependent perturbations in metabolites were observed in the tricarboxylic acid pathway (TCA). Other differentially excreted metabolites included amino acids and metabolites associated with dysregulation of energy metabolism pathways. Time-dependent apoptotic pathway activation between WT and mutant mice following IR exposure may explain the altered excretion patterns, although the origin of the metabolites remains to be determined. This first metabolomics study in urine from radiation exposed genetic mutant animal models provides evidence that this technology can be used to dissect the effects of genotoxic agents on metabolism by assessing easily accessible biofluids and identify biomarkers of radiation exposure. Applications of metabolomics could be incorporated in the future to further elucidate the effects of IR on the metabolism of Parp1(-/-) genotype by assessing individual tissues.
Copyright © 2016 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Biomarkers; DNA repair; Ionizing radiation; Metabolomics; Urine

Mesh:

Substances:

Year:  2016        PMID: 27040378      PMCID: PMC4887295          DOI: 10.1016/j.mrfmmm.2016.03.003

Source DB:  PubMed          Journal:  Mutat Res        ISSN: 0027-5107            Impact factor:   2.433


  44 in total

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Review 2.  Clinical radiation sensitivity with DNA repair disorders: an overview.

Authors:  Julianne M Pollard; Richard A Gatti
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Authors:  Mi Young Kim; Tong Zhang; W Lee Kraus
Journal:  Genes Dev       Date:  2005-09-01       Impact factor: 11.361

Review 5.  Radiation metabolomics and its potential in biodosimetry.

Authors:  Stephen L Coy; Amrita K Cheema; John B Tyburski; Evagelia C Laiakis; Sean P Collins; Albert Fornace
Journal:  Int J Radiat Biol       Date:  2011-06-22       Impact factor: 2.694

Review 6.  Skin toxicity during breast irradiation: pathophysiology and management.

Authors:  Jennifer L Harper; Lynette E Franklin; Joseph M Jenrette; Eric G Aguero
Journal:  South Med J       Date:  2004-10       Impact factor: 0.954

Review 7.  The role of PARP-1 and PARP-2 enzymes in metabolic regulation and disease.

Authors:  Péter Bai; Carles Cantó
Journal:  Cell Metab       Date:  2012-08-23       Impact factor: 27.287

8.  Radiation metabolomics. 5. Identification of urinary biomarkers of ionizing radiation exposure in nonhuman primates by mass spectrometry-based metabolomics.

Authors:  Caroline H Johnson; Andrew D Patterson; Kristopher W Krausz; John F Kalinich; John B Tyburski; Dong Wook Kang; Hans Luecke; Frank J Gonzalez; William F Blakely; Jeffrey R Idle
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9.  PARP-1 inhibition increases mitochondrial metabolism through SIRT1 activation.

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Journal:  Cell Metab       Date:  2011-04-06       Impact factor: 27.287

10.  Association between PARP-1 V762A polymorphism and breast cancer susceptibility in Saudi population.

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Journal:  PLoS One       Date:  2013-12-31       Impact factor: 3.240

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Journal:  J Am Soc Mass Spectrom       Date:  2018-05-07       Impact factor: 3.109

Review 2.  Nonhuman primates as models for the discovery and development of radiation countermeasures.

Authors:  Vijay K Singh; Ayodele O Olabisi
Journal:  Expert Opin Drug Discov       Date:  2017-05-05       Impact factor: 6.098

Review 3.  Metabolomic applications in radiation biodosimetry: exploring radiation effects through small molecules.

Authors:  Evan L Pannkuk; Albert J Fornace; Evagelia C Laiakis
Journal:  Int J Radiat Biol       Date:  2017-01-12       Impact factor: 2.694

4.  Global metabolomic responses in urine from atm deficient mice in response to LD50/30 gamma irradiation doses.

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Journal:  Environ Mol Mutagen       Date:  2018-08-10       Impact factor: 3.216

5.  Differential mobility spectrometry (DMS) reveals the elevation of urinary acetylcarnitine in non-human primates (NHPs) exposed to radiation.

Authors:  Nicholas B Vera; Zhidan Chen; Evan Pannkuk; Evagelia C Laiakis; Albert J Fornace; Derek M Erion; Stephen L Coy; Jeffrey A Pfefferkorn; Paul Vouros
Journal:  J Mass Spectrom       Date:  2018-07       Impact factor: 1.982

6.  Targeted Metabolomics of Nonhuman Primate Serum after Exposure to Ionizing Radiation: Potential Tools for High-throughput Biodosimetry.

Authors:  Evan L Pannkuk; Evagelia C Laiakis; Simon Authier; Karen Wong; Albert J Fornace
Journal:  RSC Adv       Date:  2016-05-20       Impact factor: 3.361

7.  Metabolic Dysregulation after Neutron Exposures Expected from an Improvised Nuclear Device.

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Journal:  Radiat Res       Date:  2017-05-05       Impact factor: 2.841

8.  Gas Chromatography/Mass Spectrometry Metabolomics of Urine and Serum from Nonhuman Primates Exposed to Ionizing Radiation: Impacts on the Tricarboxylic Acid Cycle and Protein Metabolism.

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9.  Quantitation of Urinary Acylcarnitines by DMS-MS/MS Uncovers the Effects of Total Body Irradiation in Cancer Patients.

Authors:  Nicholas B Vera; Stephen L Coy; Evagelia C Laiakis; Albert J Fornace; Michelle Clasquin; Christopher A Barker; Jeffrey A Pfefferkorn; Paul Vouros
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10.  Assessment of Saliva as a Potential Biofluid for Biodosimetry: A Pilot Metabolomics Study in Mice.

Authors:  Evagelia C Laiakis; Steven J Strawn; David J Brenner; Albert J Fornace
Journal:  Radiat Res       Date:  2016-06-22       Impact factor: 2.841

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