Literature DB >> 27018390

Analysis of the Genome Sequence of the Medicinal Plant Salvia miltiorrhiza.

Haibin Xu1, Jingyuan Song2, Hongmei Luo2, Yujun Zhang3, Qiushi Li2, Yingjie Zhu3, Jiang Xu3, Ying Li2, Chi Song3, Bo Wang2, Wei Sun3, Guoan Shen4, Xin Zhang2, Jun Qian2, Aijia Ji2, Zhichao Xu2, Xiang Luo2, Liu He2, Chuyuan Li5, Chao Sun2, Haixia Yan2, Guanghong Cui4, Xiwen Li1, Xian'en Li2, Jianhe Wei2, Juyan Liu5, Yitao Wang6, Alice Hayward7, David Nelson8, Zemin Ning9, Reuben J Peters10, Xiaoquan Qi11, Shilin Chen12.   

Abstract

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Year:  2016        PMID： 27018390      PMCID： PMC5517341          DOI： 10.1016/j.molp.2016.03.010

Source DB:  PubMed          Journal:  Mol Plant        ISSN： 1674-2052            Impact factor:   13.164


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  11 in total

1.  Functional Divergence of Diterpene Syntheses in the Medicinal Plant Salvia miltiorrhiza.

Authors:  Guanghong Cui; Lixin Duan; Baolong Jin; Jun Qian; Zheyong Xue; Guoan Shen; John Hugh Snyder; Jingyuan Song; Shilin Chen; Luqi Huang; Reuben J Peters; Xiaoquan Qi
Journal:  Plant Physiol       Date:  2015-06-15       Impact factor: 8.340

2.  Cytochrome P450 promiscuity leads to a bifurcating biosynthetic pathway for tanshinones.

Authors:  Juan Guo; Xiaohui Ma; Yuan Cai; Ying Ma; Zhilai Zhan; Yongjin J Zhou; Wujun Liu; Mengxin Guan; Jian Yang; Guanghong Cui; Liping Kang; Lei Yang; Ye Shen; Jinfu Tang; Huixin Lin; Xiaojing Ma; Baolong Jin; Zhenming Liu; Reuben J Peters; Zongbao K Zhao; Luqi Huang
Journal:  New Phytol       Date:  2015-12-18       Impact factor: 10.151

3.  Investigation of terpene diversification across multiple sequenced plant genomes.

Authors:  Alexander M Boutanaev; Tessa Moses; Jiachen Zi; David R Nelson; Sam T Mugford; Reuben J Peters; Anne Osbourn
Journal:  Proc Natl Acad Sci U S A       Date:  2014-12-10       Impact factor: 11.205

4.  Full-length transcriptome sequences and splice variants obtained by a combination of sequencing platforms applied to different root tissues of Salvia miltiorrhiza and tanshinone biosynthesis.

Authors:  Zhichao Xu; Reuben J Peters; Jason Weirather; Hongmei Luo; Baosheng Liao; Xin Zhang; Yingjie Zhu; Aijia Ji; Bing Zhang; Songnian Hu; Kin Fai Au; Jingyuan Song; Shilin Chen
Journal:  Plant J       Date:  2015-05-25       Impact factor: 6.417

5.  Characterization of CYP76AH4 clarifies phenolic diterpenoid biosynthesis in the Lamiaceae.

Authors:  Jiachen Zi; Reuben J Peters
Journal:  Org Biomol Chem       Date:  2013-10-10       Impact factor: 3.876

6.  CYP76AH1 catalyzes turnover of miltiradiene in tanshinones biosynthesis and enables heterologous production of ferruginol in yeasts.

Authors:  Juan Guo; Yongjin J Zhou; Matthew L Hillwig; Ye Shen; Lei Yang; Yajun Wang; Xianan Zhang; Wujun Liu; Reuben J Peters; Xiaoya Chen; Zongbao K Zhao; Luqi Huang
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-28       Impact factor: 11.205

Review 7.  To gibberellins and beyond! Surveying the evolution of (di)terpenoid metabolism.

Authors:  Jiachen Zi; Sibongile Mafu; Reuben J Peters
Journal:  Annu Rev Plant Biol       Date:  2014-01-22       Impact factor: 26.379

8.  The phusion assembler.

Authors:  James C Mullikin; Zemin Ning
Journal:  Genome Res       Date:  2003-01       Impact factor: 9.043

9.  A functional genomics approach to tanshinone biosynthesis provides stereochemical insights.

Authors:  Wei Gao; Matthew L Hillwig; Luqi Huang; Guanghong Cui; Xueyong Wang; Jianqiang Kong; Bin Yang; Reuben J Peters
Journal:  Org Lett       Date:  2009-11-19       Impact factor: 6.005

10.  Genome sequencing of the high oil crop sesame provides insight into oil biosynthesis.

Authors:  Linhai Wang; Sheng Yu; Chaobo Tong; Yingzhong Zhao; Yan Liu; Chi Song; Yanxin Zhang; Xudong Zhang; Ying Wang; Wei Hua; Donghua Li; Dan Li; Fang Li; Jingyin Yu; Chunyan Xu; Xuelian Han; Shunmou Huang; Shuaishuai Tai; Junyi Wang; Xun Xu; Yingrui Li; Shengyi Liu; Rajeev K Varshney; Jun Wang; Xiurong Zhang
Journal:  Genome Biol       Date:  2014-02-27       Impact factor: 13.583
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  77 in total

1.  agriGO v2.0: a GO analysis toolkit for the agricultural community, 2017 update.

Authors:  Tian Tian; Yue Liu; Hengyu Yan; Qi You; Xin Yi; Zhou Du; Wenying Xu; Zhen Su
Journal:  Nucleic Acids Res       Date:  2017-07-03       Impact factor: 16.971

2.  The genome of the medicinal plant Andrographis paniculata provides insight into the biosynthesis of the bioactive diterpenoid neoandrographolide.

Authors:  Wei Sun; Liang Leng; Qinggang Yin; MeiMei Xu; Mingkun Huang; Zhichao Xu; Yujun Zhang; Hui Yao; Caixia Wang; Chao Xiong; Sha Chen; Chunhong Jiang; Ning Xie; Xilong Zheng; Ying Wang; Chi Song; Reuben J Peters; Shilin Chen
Journal:  Plant J       Date:  2019-01-02       Impact factor: 6.417

3.  De novo origination of MIRNAs through generation of short inverted repeats in target genes.

Authors:  Shanfa Lu
Journal:  RNA Biol       Date:  2019-03-30       Impact factor: 4.652

4.  Overexpression of AtEDT1 promotes root elongation and affects medicinal secondary metabolite biosynthesis in roots of transgenic Salvia miltiorrhiza.

Authors:  Yu Liu; Geng Sun; Zhaohui Zhong; Linyi Ji; Yong Zhang; Jianping Zhou; Xuelian Zheng; Kejun Deng
Journal:  Protoplasma       Date:  2016-12-03       Impact factor: 3.356

5.  Transcriptomic analysis reveals potential genes involved in tanshinone biosynthesis in Salvia miltiorrhiza.

Authors:  Yujie Chang; Meizhen Wang; Jiang Li; Shanfa Lu
Journal:  Sci Rep       Date:  2019-10-17       Impact factor: 4.379

6.  The AP2/ERF transcription factor SmERF128 positively regulates diterpenoid biosynthesis in Salvia miltiorrhiza.

Authors:  Yu Zhang; Aijia Ji; Zhichao Xu; Hongmei Luo; Jingyuan Song
Journal:  Plant Mol Biol       Date:  2019-03-07       Impact factor: 4.076

7.  SmPPT, a 4-hydroxybenzoate polyprenyl diphosphate transferase gene involved in ubiquinone biosynthesis, confers salt tolerance in Salvia miltiorrhiza.

Authors:  Miaomiao Liu; Xiang Chen; Meizhen Wang; Shanfa Lu
Journal:  Plant Cell Rep       Date:  2019-08-30       Impact factor: 4.570

8.  The ethylene response factor SmERF6 co-regulates the transcription of SmCPS1 and SmKSL1 and is involved in tanshinone biosynthesis in Salvia miltiorrhiza hairy roots.

Authors:  Zhenqing Bai; Wenrui Li; Yanyan Jia; Zhiyong Yue; Jie Jiao; Wenli Huang; Pengguo Xia; Zongsuo Liang
Journal:  Planta       Date:  2018-04-27       Impact factor: 4.116

Review 9.  Genome-wide researches and applications on Dendrobium.

Authors:  Shi-Gang Zheng; Ya-Dong Hu; Ruo-Xi Zhao; Shou Yan; Xue-Qin Zhang; Ting-Mei Zhao; Ze Chun
Journal:  Planta       Date:  2018-07-31       Impact factor: 4.116

10.  Overexpression of SmMYB9b enhances tanshinone concentration in Salvia miltiorrhiza hairy roots.

Authors:  Jingxian Zhang; Lubin Zhou; Xiaoyu Zheng; Jinjia Zhang; Li Yang; Ronghui Tan; Shujuan Zhao
Journal:  Plant Cell Rep       Date:  2017-05-15       Impact factor: 4.570
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