| Literature DB >> 27014584 |
Myung-Jin Mun1, Jin-Ho Kim2, Ji-Young Choi2, Won-Cheoul Jang2.
Abstract
OBJECTIVES: Recently, several meta-analyses have reported an association between interleukin (IL) gene polymorphisms and the risk of Alzheimer's disease (AD). Several further papers discussing the relationship with the risk of AD have recently been published. The aim of this meta-analysis was to re-evaluate and update the associations between IL gene polymorphisms and the risk of AD.Entities:
Keywords: AD, Alzheimer's disease; Alzheimer's disease; CI, confidence interval; Cytokine; HWE, Hardy–Weinberg equilibrium; IL, Interleukin; Interleukin; Meta-analysis; OR, odds ratio; Polymorphism; SNP, sing nucleotide polymorphism
Year: 2016 PMID: 27014584 PMCID: PMC4792847 DOI: 10.1016/j.mgene.2016.01.001
Source DB: PubMed Journal: Meta Gene ISSN: 2214-5400
Fig. 1Flow chart of the selection of studies for inclusion in our meta-analysis.
Description of this meta-analysis of the association of four polymorphisms of IL genes with risk of Alzheimer's disease.
| IL-1α (− 889C > T) study (author/year) | Study region | Ethnicity | Criteria | Sample size (case/control) | Genotype distribution (case/control) | HWE ( | Reference | ||
|---|---|---|---|---|---|---|---|---|---|
| CC | CT | TT | |||||||
| Spain | Caucasian | NINCDS-ADRDA | 111/89 | 61/42 | 41/34 | 9/13 | 0.171 | ||
| Spain | Caucasian | NINCDS-ADRDA | 298/306 | 161/195 | 119/104 | 18/7 | 0.108 | ||
| Bonn | Caucasian | NINCDS-ADRDA-CERAD | 235/210 | 123/111 | 93/78 | 19/21 | 0.192 | ||
| Bristol | Caucasian | 198/56 | 87/24 | 8629 | 25/3 | 0.125 | |||
| Nottingham | Caucasian | 83/96 | 36/46 | 38/38 | 9/12 | 0.353 | |||
| OPTIMA | Caucasian | 233/237 | 124/102 | 80/110 | 29/25 | 0.56 | |||
| Oviedo | Caucasian | 187/109 | 95/52 | 77/50 | 15/7 | 0.269 | |||
| Rotterdam | Caucasian | 391/5110 | 185/2574 | 162/2111 | 44/425 | 0.789 | |||
| Santander | Caucasian | 302/374 | 162/220 | 114/127 | 26/27 | 0.15 | |||
| France | Caucasian | NINCDS-ADRDA | 129/190 | 60/90 | 61/85 | 8/15 | 0.409 | ||
| Deniz-Naranzo et al. (2008) | Spain | Caucasian | NINCDS-ADRDA | 282/312 | 138/168 | 118/121 | 26/23 | 0.85 | |
| Germany | Caucasian | NINCDS-ADRDA | 259/191 | 141/126 | 97/62 | 21/3 | 0.131 | ||
| Turkey | Caucasian | DSM-IV | 104/103 | 60/45 | 41/52 | 3/6 | 0.07 | ||
| USA | Caucasian | NINCDS-ADRDA | 142/119 | 73/59 | 59/49 | 10/11 | 0.858 | ||
| UK/France | Caucasian | NINCDS-ADRDA-DSM-III-R | 294/503 | 134/221 | 126/217 | 34/65 | 0.309 | ||
| Italy | Caucasian | NINCDS-ADRDA | 318/335 | 140/142 | 125/163 | 53/30 | 0.08 | ||
| UK | Caucasian | CERAD | 68/503 | 30/221 | 31/220 | 7/62 | 0.528 | ||
| Australian | Caucasian | NINCDS-ADRDA | 221/351 | 98/153 | 94/168 | 29/30 | 0.087 | ||
| China | Asian | NINCDS-ADRDA-DSM-III-R | 344/224 | 272/183 | 61/37 | 11/4 | 0.198 | ||
| Korean | Asian | NINCDS-ADRDA | 126/221 | 106/184 | 20/27 | 0/0 | 0.321 | ||
| Taiwan | Asian | NINCDS-ADRDA | 125/93 | 104/72 | 20/21 | 1/0 | 0.22 | ||
| China | Asian | NINCDS-ADRDA-DSM-IV | 145/181 | 103/128 | 41/52 | 1/1 | 0.076 | ||
| Finland | Caucasian | NINCDS-ADRDA-CERAD | 110/73 | 42/33 | 39/29 | 29/11 | 0.281 | ||
| US/UK | Caucasian | CERAD | 232/167 | 103/82 | 99/74 | 30/11 | 0.291 | ||
| USA | Caucasian | NINCDS-ADRDA-DSM-III-R | 297/204 | 139/102 | 126/86 | 32/16 | 0.717 | ||
| Brazil | Caucasian | NINCDS-ADRDA | 120/412 | 64/209 | 45/168 | 11/35 | 0.88 | ||
| US/UK | Caucasian | CERAD | 232/167 | 103/82 | 99/74 | 30/11 | 0.291 | ||
| Nishmura et al. (2004) | Japan | Asian | NINCDS-ADRDA | 172/163 | 141/126 | 31/37 | 0/0 | 0.102 | |
| Finland | Caucasian | NINCDS-ADRDA | 237/513 | 123/248 | 91/209 | 23/56 | 0.235 | ||
| Sweden | Caucasian | NINCDS-ADRDA | 198/175 | 89/93 | 89/65 | 20/17 | 0.264 | ||
| Rebeck et al. (2000) | USA | Caucasian | CERAD | 247/187 | 119/97 | 103/74 | 25/16 | 0.725 | |
| Italy | Caucasian | NINCDS-ADRDA | 19/20 | 12/7 | 3/10 | 4/3 | 0.852 | ||
| Italy | Caucasian | NINCDS-ADRDA | 353/482 | 165/229 | 153/219 | 35/34 | 0.057 | ||
| Italy | Caucasian | NINCDS-ADRDA | 225/143 | 117/83 | 90/56 | 18/4 | 0.128 | ||
| USA | Caucasian | NINCDS-ADRDA | 121/93 | 52/40 | 59/42 | 10/11 | 0.996 | ||
| Serretti (2009) (I) | Greece | Caucasian | DSM-IV | 86/113 | 45/66 | 34/39 | 7/8 | 0.504 | |
| Serretti (2009) (II) | Italy | Caucasian | NINCDS-ADRDA | 24/17 | 12/12 | 8/4 | 4/1 | 0.432 | |
| China | Asian | NINCDS-ADRDA | 201/257 | 153/217 | 45/37 | 3/3 | 0.328 | ||
| China | Asian | NINCDS-ADRDA | 234/170 | 212/147 | 21/22 | 1/1 | 0.858 | ||
| Brazil | Caucasian | NINCDS-ADRDA | 199/241 | 96/136 | 84/91 | 19/14 | 0.811 | ||
| Taiwan | Asian | NINCDS-ADRDA | 219/209 | 182/174 | 37/33 | 0/2 | 0.756 | ||
| China | Asian | – | 520/505 | 369/407 | 134/92 | 17/6 | 0.756 | ||
Bonn, Ethics Review Board of the University of Bonn; Bristol, Frenchay Local Research Ethics committee Bristol; Nottingham, Nottingham Research Committee 2 (NHS); OPTIMA, Central Oxford Ethics Committee No 1656; Oviedo, Ethical Committee of the Hospital Central de Asturias; Rotterdam, Medical Ethical Committee of the Erasmus MC; Santander, Ethical Committee of the University Hospital “Marqués de Valdecilla”, Santander; NINCDS-ADRDA, National Institute of Neurological and Communicative Disorders and Stroke and the Alzheimer's disease and Related Disorders Association; CERAD, The Consortium to Establish a Registry for Alzheimer's Disease; DSM, Diagnostic and Statistical Manual of Mental Disorder. *Zhou et al. data from abstract.
Fig. 2Forest plot for the association between the homozygote model (CC vs. TT) of the − 889C > T polymorphism of the IL-1α gene and risk of AD using a fixed-effects model.
The associations between four polymorphisms of IL genes and AD risk.
| SNP | Genetic models | Pooled OR (95% CI) | Heterogeneity | Publication bias | |||
|---|---|---|---|---|---|---|---|
| Fixed effect model | Random effect model | I2 value | |||||
| Overall | rs1800587 (IL-1α; − 889C > T) | Homozygote model (TT vs. CC) | 1.31 (1.13–1.51) | 22% | 0.110 | 0.900 | |
| Heterozygote model (CT vs. CC) | 1.05 (0.98–1.12) | 1.04 (0.97–1.13) | 24% | 0.080 | 0.174 | ||
| Dominant model (TT/CT vs. CC) | 1.08 (1.00–1.17) | 31% | 0.030 | 0.164 | |||
| Recessive model (TT vs. CC/CT) | 1.30 (1.14–1.49) | 18% | 0.160 | 0.897 | |||
| rs16944 (IL-1β; − 511C > T) | Homozygote model (TT vs. CC) | 0.95 (0.82–1.11) | 0.94 (0.77–1.16) | 37% | 0.050 | 0.381 | |
| Heterozygote model (CT vs. CC) | 0.93 (0.83–1.03) | 0.92 (0.81–1.04) | 24% | 0.160 | 0.323 | ||
| Dominant model (TT/CT vs. CC) | 0.94 (0.85–1.04) | 0.93 (0.82–1.05) | 27% | 0.140 | 0.223 | ||
| Recessive model (TT vs. CC/CT) | 0.97 (0.84–1.11) | 0.98 (0.77–1.25) | 61% | < 0.001 | 0.735 | ||
| rs1800795 (IL-6; − 174C > G) | Homozygote model (GG vs. CC) | 0.79 (0.71–0.88) | 0.83 (0.65–1.06) | 74% | < 0.001 | 0.579 | |
| Heterozygote model (GG vs. GC) | 0.95 (0.88–1.02) | 0.96 (0.84–1.10) | 62% | < 0.001 | 0.546 | ||
| Dominant model (CC/GC vs. GG) | 0.92 (0.85–0.99) | 0.92 (0.79–1.07) | 72% | < 0.001 | 0.831 | ||
| Recessive model (CC vs. GG/GC) | 0.80 (0.72–0.88) | 0.83 (0.68–1.005) | 68% | < 0.001 | 0.690 | ||
| rs1800896 (IL-10; − 1082G > A) | Homozygote model (AA vs. GG) | 0.99 (0.88–1.13) | 1.06 (0.87–1.29) | 49% | 0.005 | 0.146 | |
| Heterozygote model (GA vs. GG) | 1.11 (1.00–1.23) | 1.16 (0.98–1.37) | 50% | 0.004 | 0.517 | ||
| Dominant model (AA/GA vs. GG) | 1.08 (0.97–1.19) | 1.13 (0.96–1.33) | 51% | 0.002 | 0.331 | ||
| Recessive model (AA vs. GG/GA) | 0.93 (0.85–1.03) | 0.97 (0.83–1.13) | 49% | 0.005 | 0.177 | ||
| Caucasian | rs1800587 (IL-1α; − 889C > T) | Homozygote model (TT vs. CC) | 1.28 (1.10–1.50) | 28% | 0.070 | 0.796 | |
| Heterozygote model (CT vs. CC) | 1.03 (0.96–1.10) | 1.03 (0.95–1.11) | 12% | 0.280 | 0.435 | ||
| Dominant model (TT/CT vs. CC) | 1.07 (0.99–1.16) | 21% | 0.150 | 0.490 | |||
| Recessive model (TT vs. CC/CT) | 1.28 (1.11–1.48) | 26% | 0.090 | 0.780 | |||
| rs16944 (IL-1β; − 511C > T) | Homozygote model (TT vs. CC) | 1.04 (0.87–1.26) | 1.02 (0.77–1.35) | 47% | 0.030 | 0.438 | |
| Heterozygote model (CT vs. CC) | 0.96 (0.85–1.09) | 0.96 (0.83–1.11) | 25% | 0.190 | 0.378 | ||
| Dominant model (TT/CT vs. CC) | 0.98 (0.88–1.11) | 0.098 (0.85–1.13) | 32% | 0.130 | 0.284 | ||
| Recessive model (TT vs. CC/CT) | 1.02 (0.86–1.21) | 1.01 (0.73–1.40) | 66% | < 0.001 | 0.873 | ||
| rs1800795 (IL-6; − 174C > G) | Homozygote model (GG vs. CC) | 0.78 (0.70–0.88) | 0.82 (0.64–1.05) | 75% | < 0.001 | 0.521 | |
| Heterozygote model (GG vs. GC) | 0.94 (0.87–1.02) | 0.94 (0.83–1.08) | 60% | < 0.001 | 0.433 | ||
| Dominant model (CC/GC vs. GG) | 0.91 (0.85–0.98) | 0.91 (0.78–1.06) | 73% | < 0.001 | 0.652 | ||
| Recessive model (CC vs. GG/GC) | 0.82 (0.74–0.91) | 0.86 (0.71–1.04) | 66% | < 0.001 | 0.652 | ||
| rs1800896 (IL-10; − 1082G > A) | Homozygote model (AA vs. GG) | 0.99 (0.87–1.13) | 1.06 (0.87–1.29) | 51% | 0.004 | 0.229 | |
| Heterozygote model (GA vs. GG) | 1.11 (1.00–1.23) | 1.15 (0.97–1.36) | 52% | 0.003 | 0.628 | ||
| Dominant model (AA/GA vs. GG) | 1.11 (1.00–1.23) | 1.15 (0.97–1.36) | 52% | 0.003 | 0.334 | ||
| Recessive model (AA vs. GG/GA) | 0.93 (0.85–1.03) | 0.97 (0.83–1.14) | 52% | 0.003 | 0.172 | ||
Statistically significant (p < 0.05).
Associations between four polymorphisms of IL genes and AD risk in studies in Hardy–Weinberg equilibrium (HWE).
| SNP | Genetic models | Pooled OR (95% CI) | Heterogeneity | Publication bias | Departed from the HWE | ||
|---|---|---|---|---|---|---|---|
| Fixed effect model | Random effect model | I2 value | |||||
| rs1800587 (IL-1α; − 889C > T) | Homozygote model (TT vs. CC) | 1.31 (1.13–1.51) | 22% | 0.110 | 0.900 | / | |
| Heterozygote model (CT vs. CC) | 1.05 (0.98–1.12) | 1.04 (0.97–1.13) | 24% | 0.080 | 0.174 | ||
| Dominant model (TT/CT vs. CC) | 1.08 (1.00–1.17) | 31% | 0.030 | 0.164 | |||
| Recessive model (TT vs. CC/CT) | 1.30 (1.14–1.49) | 18% | 0.160 | 0.897 | |||
| rs16944 (IL-1β; − 511C > T) | Homozygote model (TT vs. CC) | 0.95 (0.81–1.12) | 0.94 (0.75–1.18) | 42% | 0.040 | 0.284 | |
| Heterozygote model (CT vs. CC) | 0.94 (0.84–1.06) | 0.94 (0.82–1.08) | 29% | 0.130 | 0.924 | ||
| Dominant model (TT/CT vs. CC) | 0.95 (0.86–1.06) | 0.94 (0.82–1.08) | 32% | 0.100 | 0.528 | ||
| Recessive model (TT vs. CC/CT) | 0.96 (0.82–1.11) | 0.98 (0.75–1.28) | 63% | < 0.001 | 0.475 | ||
| rs1800795 (IL-6; − 174C > G) | Homozygote model (GG vs. CC) | 0.79 (0.70–0.88) | 0.85 (0.64–1.13) | 78% | < 0.001 | 0.670 | |
| Heterozygote model (GG vs. GC) | 0.97 (0.89–1.05) | 0.99 (0.85–1.15) | 64% | < 0.001 | 0.953 | ||
| Dominant model (CC/GC vs. GG) | 0.93 (0.86–1.01) | 0.95 (0.80–1.13) | 76% | < 0.001 | 0.917 | ||
| Recessive model (CC vs. GG/GC) | 0.79 (0.71–0.88) | 0.83 (0.67–1.03) | 70% | < 0.001 | 0.616 | ||
| rs1800896 (IL-10; − 1082G > A) | Homozygote model (AA vs. GG) | 0.98 (0.86–1.12) | 1.04 (0.85–1.28) | 51% | 0.005 | 0.158 | |
| Heterozygote model (GA vs. GG) | 1.07 (0.96–1.20) | 1.12 (0.94–1.33) | 51% | 0.006 | 0.631 | ||
| Dominant model (AA/GA vs. GG) | 1.04 (0.94–1.16) | 1.10 (0.93–1.29) | 51% | 0.005 | 0.353 | ||
| Recessive model (AA vs. GG/GA) | 0.93 (0.84–1.03) | 0.97 (0.83–1.14) | 55% | 0.002 | 0.144 | ||
Combarros et al. (2010) (I), Bonn, Ethics Review Board of the University of Bonn; Combarros et al. (2010) (IV), OPTIMA, Central Oxford Ethics Committee No 1656; Heun et al. (2012), Nottingham, Nottingham Research Committee 2 (NHS).
− 889C > T polymorphism of IL-1α studies were not departed from HWE.
Statistically significant (p < 0.05).
Fig. 3Funnel plot for the association between the − 889C > T polymorphism and Alzheimer's disease.