Literature DB >> 27709510

Where Does the Electron Go? Stable and Metastable Peptide Cation Radicals Formed by Electron Transfer.

Robert Pepin1, Erik D Layton1, Yang Liu1, Carlos Afonso2, František Tureček3.   

Abstract

Electron transfer to doubly and triply charged heptapeptide ions containing polar residues Arg, Lys, and Asp in combination with nonpolar Gly, Ala, and Pro or Leu generates stable and metastable charge-reduced ions, (M + 2H)+●, in addition to standard electron-transfer dissociation (ETD) fragment ions. The metastable (M + 2H)+● ions spontaneously dissociate upon resonant ejection from the linear ion trap, giving irregularly shaped peaks with offset m/z values. The fractions of stable and metastable (M + 2H)+● ions and their mass shifts depend on the presence of Pro-4 and Leu-4 residues in the peptides, with the Pro-4 sequences giving larger fractions of the stable ions while showing smaller mass shifts for the metastables. Conversion of the Asp and C-terminal carboxyl groups to methyl esters further lowers the charge-reduced ion stability. Collisional activation and photodissociation at 355 nm of mass-selected (M + 2H)+● results in different dissociations that give sequence specific MS3 spectra. With a single exception of charge-reduced (LKGLADR + 2H)+●, the MS3 spectra do not produce ETD sequence fragments of the c and z type. Hence, these (M + 2H)+● ions are covalent radicals, not ion-molecule complexes, undergoing dramatically different dissociations in the ground and excited electronic states. The increased stability of the Pro-4 containing (M + 2H)+● ions is attributed to radicals formed by opening of the Pro ring and undergoing further stabilization by hydrogen atom migrations. UV-VIS photodissociation action spectroscopy and time-dependent density functional theory calculations are used in a case in point study of the stable (LKGPADR + 2H)+● ion produced by ETD. In contrast to singly-reduced peptide ions, doubly reduced (M + 3H)+ ions are stable only when formed from the Pro-4 precursors and show all characteristics of even electron ions regarding no photon absorption at 355 nm or ion-molecule reactions, and exhibiting proton driven collision induced dissociations. Graphical Abstract ᅟ.

Entities:  

Keywords:  Action spectroscopy; Electron transfer; Metastable peptide ions; Photodissociation; Time-dependent DFT calculations

Mesh:

Substances:

Year:  2016        PMID: 27709510     DOI: 10.1007/s13361-016-1512-z

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  62 in total

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Journal:  J Am Soc Mass Spectrom       Date:  2012-06-06       Impact factor: 3.109

2.  Supplemental activation method for high-efficiency electron-transfer dissociation of doubly protonated peptide precursors.

Authors:  Danielle L Swaney; Graeme C McAlister; Matthew Wirtala; Jae C Schwartz; John E P Syka; Joshua J Coon
Journal:  Anal Chem       Date:  2007-01-15       Impact factor: 6.986

3.  The early life of a peptide cation-radical. Ground and excited-state trajectories of electron-based peptide dissociations during the first 330 femtoseconds.

Authors:  Christopher L Moss; Wenkel Liang; Xiaosong Li; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2011-12-21       Impact factor: 3.109

4.  Sequence information, distinction and quantitation of C-terminal leucine and isoleucine in ternary complexes of tripeptides with Cu(II) and 2,2'-bipyridine.

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Journal:  J Mass Spectrom       Date:  2001-03       Impact factor: 1.982

5.  Benchmarking Electronic Excitation Energies and Transitions in Peptide Radicals.

Authors:  František Tureček
Journal:  J Phys Chem A       Date:  2015-09-22       Impact factor: 2.781

Review 6.  Photodissociation mass spectrometry: new tools for characterization of biological molecules.

Authors:  Jennifer S Brodbelt
Journal:  Chem Soc Rev       Date:  2014-01-30       Impact factor: 54.564

7.  Activated-ion electron transfer dissociation improves the ability of electron transfer dissociation to identify peptides in a complex mixture.

Authors:  Aaron R Ledvina; Nicole A Beauchene; Graeme C McAlister; John E P Syka; Jae C Schwartz; Jens Griep-Raming; Michael S Westphall; Joshua J Coon
Journal:  Anal Chem       Date:  2010-11-09       Impact factor: 6.986

8.  N[bond]C(alpha) bond dissociation energies and kinetics in amide and peptide radicals. Is the dissociation a non-ergodic process?

Authors:  Frantisek Turecek
Journal:  J Am Chem Soc       Date:  2003-05-14       Impact factor: 15.419

9.  On the mechanism of electron-capture-induced dissociation of peptide dications from 15n-labeling and crown-ether complexation.

Authors:  Anne I S Holm; Preben Hvelplund; Umesh Kadhane; Mikkel Koefoed Larsen; Bo Liu; Steen Brøndsted Nielsen; Subhasis Panja; Jan Mondrup Pedersen; Troels Skrydstrup; Kristian Støchkel; Evan R Williams; Esben S Worm
Journal:  J Phys Chem A       Date:  2007-09-12       Impact factor: 2.781

10.  A bioinspired construct that mimics the proton coupled electron transfer between P680*+ and the Tyr(Z)-His190 pair of photosystem II.

Authors:  Gary F Moore; Michael Hambourger; Miguel Gervaldo; Oleg G Poluektov; Tijana Rajh; Devens Gust; Thomas A Moore; Ana L Moore
Journal:  J Am Chem Soc       Date:  2008-07-19       Impact factor: 15.419

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  4 in total

1.  Radical Rearrangement Chemistry in Ultraviolet Photodissociation of Iodotyrosine Systems: Insights from Metastable Dissociation, Infrared Ion Spectroscopy, and Reaction Pathway Calculations.

Authors:  Karnamohit Ranka; Ning Zhao; Long Yu; John F Stanton; Nicolas C Polfer
Journal:  J Am Soc Mass Spectrom       Date:  2018-05-29       Impact factor: 3.109

2.  Specific Cα-C Bond Cleavage of β-Carbon-Centered Radical Peptides Produced by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry.

Authors:  Keishiro Nagoshi; Mariko Yamakoshi; Kenya Sakamoto; Mitsuo Takayama
Journal:  J Am Soc Mass Spectrom       Date:  2018-04-19       Impact factor: 3.109

3.  Spontaneous Isomerization of Peptide Cation Radicals Following Electron Transfer Dissociation Revealed by UV-Vis Photodissociation Action Spectroscopy.

Authors:  Naruaki Imaoka; Camille Houferak; Megan P Murphy; Huong T H Nguyen; Andy Dang; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2018-01-16       Impact factor: 3.109

Review 4.  The Role of Electron Transfer Dissociation in Modern Proteomics.

Authors:  Nicholas M Riley; Joshua J Coon
Journal:  Anal Chem       Date:  2017-12-12       Impact factor: 6.986

  4 in total

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