Literature DB >> 27003891

The Eukaryotic Replisome Goes Under the Microscope.

Mike O'Donnell1, Huilin Li2.   

Abstract

The machinery at the eukaryotic replication fork has seen many new structural advances using electron microscopy and crystallography. Recent structures of eukaryotic replisome components include the Mcm2-7 complex, the CMG helicase, DNA polymerases, a Ctf4 trimer hub and the first look at a core replisome of 20 different proteins containing the helicase, primase, leading polymerase and a lagging strand polymerase. The eukaryotic core replisome shows an unanticipated architecture, with one polymerase sitting above the helicase and the other below. Additionally, structures of Mcm2 bound to an H3/H4 tetramer suggest a direct role of the replisome in handling nucleosomes, which are important to DNA organization and gene regulation. This review provides a summary of some of the many recent advances in the structure of the eukaryotic replisome.
Copyright © 2016 Elsevier Ltd. All rights reserved.

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Year:  2016        PMID: 27003891      PMCID: PMC4859309          DOI: 10.1016/j.cub.2016.02.034

Source DB:  PubMed          Journal:  Curr Biol        ISSN: 0960-9822            Impact factor:   10.834


  88 in total

Review 1.  On helicases and other motor proteins.

Authors:  Eric J Enemark; Leemor Joshua-Tor
Journal:  Curr Opin Struct Biol       Date:  2008-03-10       Impact factor: 6.809

2.  Crystal structure of the nucleosome core particle at 2.8 A resolution.

Authors:  K Luger; A W Mäder; R K Richmond; D F Sargent; T J Richmond
Journal:  Nature       Date:  1997-09-18       Impact factor: 49.962

3.  Yeast DNA primase and DNA polymerase activities. An analysis of RNA priming and its coupling to DNA synthesis.

Authors:  H Singh; R G Brooke; M H Pausch; G T Williams; C Trainor; L B Dumas
Journal:  J Biol Chem       Date:  1986-06-25       Impact factor: 5.157

4.  Structural characterization by cross-linking reveals the detailed architecture of a coatomer-related heptameric module from the nuclear pore complex.

Authors:  Yi Shi; Javier Fernandez-Martinez; Elina Tjioe; Riccardo Pellarin; Seung Joong Kim; Rosemary Williams; Dina Schneidman-Duhovny; Andrej Sali; Michael P Rout; Brian T Chait
Journal:  Mol Cell Proteomics       Date:  2014-08-26       Impact factor: 5.911

5.  The single minichromosome maintenance protein of Methanobacterium thermoautotrophicum DeltaH contains DNA helicase activity.

Authors:  Z Kelman; J K Lee; J Hurwitz
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

6.  The hexameric helicase DnaB adopts a nonplanar conformation during translocation.

Authors:  Ornchuma Itsathitphaisarn; Richard A Wing; William K Eliason; Jimin Wang; Thomas A Steitz
Journal:  Cell       Date:  2012-09-27       Impact factor: 41.582

7.  Proteomic and genomic characterization of chromatin complexes at a boundary.

Authors:  Alan J Tackett; David J Dilworth; Megan J Davey; Michael O'Donnell; John D Aitchison; Michael P Rout; Brian T Chait
Journal:  J Cell Biol       Date:  2005-04-11       Impact factor: 10.539

8.  Mechanism for priming DNA synthesis by yeast DNA polymerase α.

Authors:  Rajika L Perera; Rubben Torella; Sebastian Klinge; Mairi L Kilkenny; Joseph D Maman; Luca Pellegrini
Journal:  Elife       Date:  2013-04-02       Impact factor: 8.140

9.  A structural role for the PHP domain in E. coli DNA polymerase III.

Authors:  Tiago Barros; Joel Guenther; Brian Kelch; Jordan Anaya; Arjun Prabhakar; Mike O'Donnell; John Kuriyan; Meindert H Lamers
Journal:  BMC Struct Biol       Date:  2013-05-14

10.  Crystal structure of yeast DNA polymerase ε catalytic domain.

Authors:  Rinku Jain; Kanagalaghatta R Rajashankar; Angeliki Buku; Robert E Johnson; Louise Prakash; Satya Prakash; Aneel K Aggarwal
Journal:  PLoS One       Date:  2014-04-14       Impact factor: 3.240

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  16 in total

1.  Bacterial and Eukaryotic Replisome Machines.

Authors:  Nina Yao; Mike O'Donnell
Journal:  JSM Biochem Mol Biol       Date:  2016-05-30

2.  Structure of eukaryotic CMG helicase at a replication fork and implications to replisome architecture and origin initiation.

Authors:  Roxana Georgescu; Zuanning Yuan; Lin Bai; Ruda de Luna Almeida Santos; Jingchuan Sun; Dan Zhang; Olga Yurieva; Huilin Li; Michael E O'Donnell
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-17       Impact factor: 11.205

Review 3.  Cryo-EM of dynamic protein complexes in eukaryotic DNA replication.

Authors:  Jingchuan Sun; Zuanning Yuan; Lin Bai; Huilin Li
Journal:  Protein Sci       Date:  2016-09-14       Impact factor: 6.725

Review 4.  Single-Molecule Studies of Telomeres and Telomerase.

Authors:  Joseph W Parks; Michael D Stone
Journal:  Annu Rev Biophys       Date:  2017-03-22       Impact factor: 12.981

5.  The Fork Protection Complex: A Regulatory Hub at the Head of the Replisome.

Authors:  Daniel B Grabarczyk
Journal:  Subcell Biochem       Date:  2022

6.  Characterization of a Novel MMS-Sensitive Allele of Schizosaccharomyces pombe mcm4.

Authors:  Nimna S Ranatunga; Susan L Forsburg
Journal:  G3 (Bethesda)       Date:  2016-10-13       Impact factor: 3.154

Review 7.  Replication Fork Protection Factors Controlling R-Loop Bypass and Suppression.

Authors:  Emily Yun-Chia Chang; Peter C Stirling
Journal:  Genes (Basel)       Date:  2017-01-14       Impact factor: 4.096

8.  The human CTF4-orthologue AND-1 interacts with DNA polymerase α/primase via its unique C-terminal HMG box.

Authors:  Mairi L Kilkenny; Aline C Simon; Jack Mainwaring; David Wirthensohn; Sandro Holzer; Luca Pellegrini
Journal:  Open Biol       Date:  2017-11       Impact factor: 6.411

Review 9.  Regulation and Modulation of Human DNA Polymerase δ Activity and Function.

Authors:  Marietta Y W T Lee; Xiaoxiao Wang; Sufang Zhang; Zhongtao Zhang; Ernest Y C Lee
Journal:  Genes (Basel)       Date:  2017-07-24       Impact factor: 4.096

Review 10.  From structure to mechanism-understanding initiation of DNA replication.

Authors:  Alberto Riera; Marta Barbon; Yasunori Noguchi; L Maximilian Reuter; Sarah Schneider; Christian Speck
Journal:  Genes Dev       Date:  2017-06-01       Impact factor: 11.361

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