Literature DB >> 26989266

Natural history collections-based research: progress, promise, and best practices.

Bryan S McLean1, Kayce C Bell1, Jonathan L Dunnum1, Bethany Abrahamson1, Jocelyn P Colella1, Eleanor R Deardorff1, Jessica A Weber1, Amanda K Jones1, Fernando Salazar-Miralles1, Joseph A Cook1.   

Abstract

Specimens and associated data in natural history collections (NHCs) foster substantial scientific progress. In this paper, we explore recent contributions of NHCs to the study of systematics and biogeography, genomics, morphology, stable isotope ecology, and parasites and pathogens of mammals. To begin to assess the magnitude and scope of these contributions, we analyzed publications in the Journal of Mammalogy over the last decade, as well as recent research supported by a single university mammal collection (Museum of Southwestern Biology, Division of Mammals). Using these datasets, we also identify weak links that may be hindering the development of crucial NHC infrastructure. Maintaining the vitality and growth of this foundation of mammalogy depends on broader engagement and support from across the scientific community and is both an ethical and scientific imperative given the rapidly changing environmental conditions on our planet.

Entities:  

Keywords:  GenBank; IACUC; data integration; ethics; natural history collections; specimens; voucher collection

Year:  2015        PMID: 26989266      PMCID: PMC4794611          DOI: 10.1093/jmammal/gyv178

Source DB:  PubMed          Journal:  J Mammal        ISSN: 0022-2372            Impact factor:   2.416


  81 in total

Review 1.  Mitogenomic analyses from ancient DNA.

Authors:  Johanna L A Paijmans; M Thomas P Gilbert; Michael Hofreiter
Journal:  Mol Phylogenet Evol       Date:  2012-06-15       Impact factor: 4.286

2.  Regulatory changes contribute to the adaptive enhancement of thermogenic capacity in high-altitude deer mice.

Authors:  Zachary A Cheviron; Gwendolyn C Bachman; Alex D Connaty; Grant B McClelland; Jay F Storz
Journal:  Proc Natl Acad Sci U S A       Date:  2012-05-14       Impact factor: 11.205

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Authors:  Victor C Mason; Gang Li; Kristofer M Helgen; William J Murphy
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Authors:  Miriam L Zelditch; Jingchun Li; Lucy A P Tran; Donald L Swiderski
Journal:  Evolution       Date:  2015-04-27       Impact factor: 3.694

5.  Bat-cave catchment areas: using stable isotopes (deltaD) to determine the probable origins of hibernating bats.

Authors:  Alexis R Sullivan; Joseph K Bump; Laura A Kruger; Rolf O Peterson
Journal:  Ecol Appl       Date:  2012-07       Impact factor: 4.657

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Journal:  PLoS Pathog       Date:  2010-10-07       Impact factor: 6.823

8.  Using museum collections to detect pathogens.

Authors:  C Miguel Pinto; B Dnate Baxter; J Delton Hanson; Francisca M Mendez-Harclerode; John R Suchecki; Mario J Grijalva; Charles F Fulhorst; Robert D Bradley
Journal:  Emerg Infect Dis       Date:  2010-02       Impact factor: 6.883

9.  Museum material reveals a frog parasite emergence after the invasion of the cane toad in Australia.

Authors:  Ashlie Hartigan; David N Phalen; Jan Slapeta
Journal:  Parasit Vectors       Date:  2010-06-10       Impact factor: 3.876

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Authors:  David L Reed; Jessica E Light; Julie M Allen; Jeremy J Kirchman
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  19 in total

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Authors:  Emily K Meineke; T Jonathan Davies; Barnabas H Daru; Charles C Davis
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-19       Impact factor: 6.237

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Authors:  Graham Gower; Lindsey E Fenderson; Alexander T Salis; Kristofer M Helgen; Ayla L van Loenen; Holly Heiniger; Emilia Hofman-Kamińska; Rafał Kowalczyk; Kieren J Mitchell; Bastien Llamas; Alan Cooper
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-03       Impact factor: 11.205

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Authors:  Natalie Cooper; Alexander L Bond; Joshua L Davis; Roberto Portela Miguez; Louise Tomsett; Kristofer M Helgen
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Review 4.  Museum specimens provide novel insights into changing plant-herbivore interactions.

Authors:  Emily K Meineke; T Jonathan Davies
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2018-11-19       Impact factor: 6.671

5.  Mutualism in museums: A model for engaging undergraduates in biodiversity science.

Authors:  Anna E Hiller; Carla Cicero; Monica J Albe; Theresa L W Barclay; Carol L Spencer; Michelle S Koo; Rauri C K Bowie; Eileen A Lacey
Journal:  PLoS Biol       Date:  2017-11-21       Impact factor: 8.029

Review 6.  Novel Substrates as Sources of Ancient DNA: Prospects and Hurdles.

Authors:  Eleanor Joan Green; Camilla F Speller
Journal:  Genes (Basel)       Date:  2017-07-13       Impact factor: 4.096

7.  Museomics for reconstructing historical floristic exchanges: Divergence of stone oaks across Wallacea.

Authors:  Joeri S Strijk; Hoàng Thi Binh; Nguyen Van Ngoc; Joan T Pereira; J W Ferry Slik; Rahayu S Sukri; Yoshihisa Suyama; Shuichiro Tagane; Jan J Wieringa; Tetsukazu Yahara; Damien D Hinsinger
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8.  Temporal degradation of data limits biodiversity research.

Authors:  Geiziane Tessarolo; Richard Ladle; Thiago Rangel; Joaquin Hortal
Journal:  Ecol Evol       Date:  2017-07-27       Impact factor: 2.912

9.  A linked-read approach to museomics: Higher quality de novo genome assemblies from degraded tissues.

Authors:  Jocelyn P Colella; Anna Tigano; Matthew D MacManes
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10.  Impacts of late Quaternary environmental change on the long-tailed ground squirrel (Urocitellus undulatus) in Mongolia.

Authors:  Bryan S McLean; Batsaikhan Nyamsuren; Andrey Tchabovsky; Joseph A Cook
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