Literature DB >> 26980304

Enhancing Important Fluctuations: Rare Events and Metadynamics from a Conceptual Viewpoint.

Omar Valsson1,2, Pratyush Tiwary3, Michele Parrinello1,2.   

Abstract

Atomistic simulations play a central role in many fields of science. However, their usefulness is often limited by the fact that many systems are characterized by several metastable states separated by high barriers, leading to kinetic bottlenecks. Transitions between metastable states are thus rare events that occur on significantly longer timescales than one can simulate in practice. Numerous enhanced sampling methods have been introduced to alleviate this timescale problem, including methods based on identifying a few crucial order parameters or collective variables and enhancing the sampling of these variables. Metadynamics is one such method that has proven successful in a great variety of fields. Here we review the conceptual and theoretical foundations of metadynamics. As demonstrated, metadynamics is not just a practical tool but can also be considered an important development in the theory of statistical mechanics.

Keywords:  atomistic simulations; collective variables; enhanced sampling; free energy calculations; kinetic bottlenecks; kinetic rate calculations

Year:  2016        PMID: 26980304     DOI: 10.1146/annurev-physchem-040215-112229

Source DB:  PubMed          Journal:  Annu Rev Phys Chem        ISSN: 0066-426X            Impact factor:   12.703


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