Literature DB >> 26979951

Biosynthetic investigation of phomopsins reveals a widespread pathway for ribosomal natural products in Ascomycetes.

Wei Ding1, Wan-Qiu Liu1, Youli Jia1, Yongzhen Li1, Wilfred A van der Donk2, Qi Zhang3.   

Abstract

Production of ribosomally synthesized and posttranslationally modified peptides (RiPPs) has rarely been reported in fungi, even though organisms of this kingdom have a long history as a prolific source of natural products. Here we report an investigation of the phomopsins, antimitotic mycotoxins. We show that phomopsin is a fungal RiPP and demonstrate the widespread presence of a pathway for the biosynthesis of a family of fungal cyclic RiPPs, which we term dikaritins. We characterize PhomM as an S-adenosylmethionine-dependent α-N-methyltransferase that converts phomopsin A to an N,N-dimethylated congener (phomopsin E), and show that the methyltransferases involved in dikaritin biosynthesis have evolved differently and likely have broad substrate specificities. Genome mining studies identified eight previously unknown dikaritins in different strains, highlighting the untapped capacity of RiPP biosynthesis in fungi and setting the stage for investigating the biological activities and unknown biosynthetic transformations of this family of fungal natural products.

Entities:  

Keywords:  RiPP; biosynthesis; methyltransferase; mycotoxin; posttranslational modification

Mesh:

Substances:

Year:  2016        PMID: 26979951      PMCID: PMC4822579          DOI: 10.1073/pnas.1522907113

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  45 in total

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Journal:  Fungal Genet Biol       Date:  2015-12-15       Impact factor: 3.495

2.  Integration of biological networks and gene expression data using Cytoscape.

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Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 3.  Molecular diversity sculpted by fungal PKS-NRPS hybrids.

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8.  An enzyme-coupled colorimetric assay for S-adenosylmethionine-dependent methyltransferases.

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  28 in total

Review 1.  Ribosomally synthesized and post-translationally modified peptide natural product discovery in the genomic era.

Authors:  Kenton J Hetrick; Wilfred A van der Donk
Journal:  Curr Opin Chem Biol       Date:  2017-03-02       Impact factor: 8.822

Review 2.  Dehydroamino acids: chemical multi-tools for late-stage diversification.

Authors:  Jonathan W Bogart; Albert A Bowers
Journal:  Org Biomol Chem       Date:  2019-04-10       Impact factor: 3.876

3.  Autocatalytic backbone N-methylation in a family of ribosomal peptide natural products.

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Authors:  Garret M Rubin; Yousong Ding
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Review 5.  Biosynthetic Proteases That Catalyze the Macrocyclization of Ribosomally Synthesized Linear Peptides.

Authors:  Chayanid Ongpipattanakul; Satish K Nair
Journal:  Biochemistry       Date:  2018-03-27       Impact factor: 3.162

6.  Victorin, the host-selective cyclic peptide toxin from the oat pathogen Cochliobolus victoriae, is ribosomally encoded.

Authors:  Simon C Kessler; Xianghui Zhang; Megan C McDonald; Cameron L M Gilchrist; Zeran Lin; Adriana Rightmyer; Peter S Solomon; B Gillian Turgeon; Yit-Heng Chooi
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7.  Three Principles of Diversity-Generating Biosynthesis.

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Journal:  Acc Chem Res       Date:  2017-09-11       Impact factor: 22.384

8.  Investigation of Substrate Recognition and Biosynthesis in Class IV Lanthipeptide Systems.

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Journal:  J Am Chem Soc       Date:  2018-04-19       Impact factor: 15.419

9.  Roads to Rome: Role of Multiple Cassettes in Cyanobactin RiPP Biosynthesis.

Authors:  Wenjia Gu; Debosmita Sardar; Elizabeth Pierce; Eric W Schmidt
Journal:  J Am Chem Soc       Date:  2018-11-14       Impact factor: 15.419

10.  Post-translational formation of strained cyclophanes in bacteria.

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Journal:  Nat Chem       Date:  2020-08-17       Impact factor: 24.427

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