Literature DB >> 26971492

Structural Basis and IP6 Requirement for Pds5-Dependent Cohesin Dynamics.

Zhuqing Ouyang1, Ge Zheng1, Diana R Tomchick2, Xuelian Luo3, Hongtao Yu4.   

Abstract

The ring-shaped cohesin complex regulates transcription, DNA repair, and chromosome segregation by dynamically entrapping chromosomes to promote chromosome compaction and sister-chromatid cohesion. The cohesin ring needs to open and close to allow its loading to and release from chromosomes. Cohesin dynamics are controlled by the releasing factors Pds5 and Wapl and the cohesin stabilizer Sororin. Here, we report the crystal structure of human Pds5B bound to a conserved peptide motif found in both Wapl and Sororin. Our structure establishes the basis for how Wapl and Sororin antagonistically influence cohesin dynamics. The structure further reveals that Pds5 can bind inositol hexakisphosphate (IP6). The IP6-binding segment of Pds5B is shaped like the jaw of a plier lever and inhibits the binding of Scc1 to Smc3. We propose that Pds5 stabilizes a transient, open state of cohesin to promote its release from chromosomes.
Copyright © 2016 Elsevier Inc. All rights reserved.

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Year:  2016        PMID: 26971492      PMCID: PMC5560056          DOI: 10.1016/j.molcel.2016.02.033

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  45 in total

1.  Cleavage of cohesin by the CD clan protease separin triggers anaphase in yeast.

Authors:  F Uhlmann; D Wernic; M A Poupart; E V Koonin; K Nasmyth
Journal:  Cell       Date:  2000-10-27       Impact factor: 41.582

2.  Scc1 sumoylation by Mms21 promotes sister chromatid recombination through counteracting Wapl.

Authors:  Nan Wu; Xiangduo Kong; Zhejian Ji; Weihua Zeng; Patrick Ryan Potts; Kyoko Yokomori; Hongtao Yu
Journal:  Genes Dev       Date:  2012-07-01       Impact factor: 11.361

3.  Genetic evidence that the acetylation of the Smc3p subunit of cohesin modulates its ATP-bound state to promote cohesion establishment in Saccharomyces cerevisiae.

Authors:  Jill M Heidinger-Pauli; Itay Onn; Douglas Koshland
Journal:  Genetics       Date:  2010-05-24       Impact factor: 4.562

4.  Human Wapl is a cohesin-binding protein that promotes sister-chromatid resolution in mitotic prophase.

Authors:  Rita Gandhi; Peter J Gillespie; Tatsuya Hirano
Journal:  Curr Biol       Date:  2006-11-16       Impact factor: 10.834

5.  Functional contribution of Pds5 to cohesin-mediated cohesion in human cells and Xenopus egg extracts.

Authors:  Ana Losada; Tomoki Yokochi; Tatsuya Hirano
Journal:  J Cell Sci       Date:  2005-04-26       Impact factor: 5.285

Review 6.  Cohesin: its roles and mechanisms.

Authors:  Kim Nasmyth; Christian H Haering
Journal:  Annu Rev Genet       Date:  2009       Impact factor: 16.830

Review 7.  Sororin, the cell cycle and sister chromatid cohesion.

Authors:  Susannah Rankin
Journal:  Cell Cycle       Date:  2005-08-21       Impact factor: 4.534

Review 8.  Cohesinopathies, gene expression, and chromatin organization.

Authors:  Tania Bose; Jennifer L Gerton
Journal:  J Cell Biol       Date:  2010-04-19       Impact factor: 10.539

9.  MolProbity: all-atom structure validation for macromolecular crystallography.

Authors:  Vincent B Chen; W Bryan Arendall; Jeffrey J Headd; Daniel A Keedy; Robert M Immormino; Gary J Kapral; Laura W Murray; Jane S Richardson; David C Richardson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

10.  Structure of cohesin subcomplex pinpoints direct shugoshin-Wapl antagonism in centromeric cohesion.

Authors:  Kodai Hara; Ge Zheng; Qianhui Qu; Hong Liu; Zhuqing Ouyang; Zhe Chen; Diana R Tomchick; Hongtao Yu
Journal:  Nat Struct Mol Biol       Date:  2014-08-31       Impact factor: 15.369

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  58 in total

Review 1.  The Many Roles of Cohesin in Drosophila Gene Transcription.

Authors:  Dale Dorsett
Journal:  Trends Genet       Date:  2019-05-23       Impact factor: 11.639

Review 2.  Towards a Unified Model of SMC Complex Function.

Authors:  Markus Hassler; Indra A Shaltiel; Christian H Haering
Journal:  Curr Biol       Date:  2018-11-05       Impact factor: 10.834

3.  Recruitment of Rec8, Pds5 and Rad61/Wapl to meiotic homolog pairing, recombination, axis formation and S-phase.

Authors:  Soogil Hong; Jeong H Joo; Hyeseon Yun; Nancy Kleckner; Keun P Kim
Journal:  Nucleic Acids Res       Date:  2019-12-16       Impact factor: 16.971

Review 4.  Condensins and cohesins - one of these things is not like the other!

Authors:  Robert V Skibbens
Journal:  J Cell Sci       Date:  2019-02-07       Impact factor: 5.285

5.  Cohesin acetylation and Wapl-Pds5 oppositely regulate translocation of cohesin along DNA.

Authors:  Mai Kanke; Eri Tahara; Pim J Huis In't Veld; Tomoko Nishiyama
Journal:  EMBO J       Date:  2016-11-21       Impact factor: 11.598

6.  Suramin and NF449 are IP5K inhibitors that disrupt inositol hexakisphosphate-mediated regulation of cullin-RING ligase and sensitize cancer cells to MLN4924/pevonedistat.

Authors:  Xiaozhe Zhang; Shaodong Shi; Yang Su; Xiaoli Yang; Sining He; Xiuyan Yang; Jing Wu; Jian Zhang; Feng Rao
Journal:  J Biol Chem       Date:  2020-06-03       Impact factor: 5.157

7.  A kinase-dependent role for Haspin in antagonizing Wapl and protecting mitotic centromere cohesion.

Authors:  Cai Liang; Qinfu Chen; Qi Yi; Miao Zhang; Haiyan Yan; Bo Zhang; Linli Zhou; Zhenlei Zhang; Feifei Qi; Sheng Ye; Fangwei Wang
Journal:  EMBO Rep       Date:  2017-11-14       Impact factor: 8.807

8.  Opposing Functions of the N-terminal Acetyltransferases Naa50 and NatA in Sister-chromatid Cohesion.

Authors:  Ziye Rong; Zhuqing Ouyang; Robert S Magin; Ronen Marmorstein; Hongtao Yu
Journal:  J Biol Chem       Date:  2016-07-15       Impact factor: 5.157

Review 9.  Cohesin Mutations in Cancer.

Authors:  Magali De Koninck; Ana Losada
Journal:  Cold Spring Harb Perspect Med       Date:  2016-12-01       Impact factor: 6.915

10.  A synthetic biological approach to reconstitution of inositide signaling pathways in bacteria.

Authors:  Bradley P Clarke; Brandon L Logeman; Andrew T Hale; Zigmund Luka; John D York
Journal:  Adv Biol Regul       Date:  2019-07-30
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